Contig 013330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019D22Sequence250013330 (3)emb|CBI19672.3|3e-05unnamed protein product [Vitis vinifera]750007265 (4)ref|XP_009630489.1|1e-62PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Nicotiana tomen
JMSF042J07Sequence789013330 (3)emb|CBI19672.3|7e-158unnamed protein product [Vitis vinifera]786007265 (4)ref|XP_009630489.1|9e-51PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Nicotiana tomen
JMSF045J06Sequence831013330 (3)emb|CBI19672.3|3e-149unnamed protein product [Vitis vinifera]868021574ref|XP_009796400.1|1e-38PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like isoform X2

Alignment

This contig is upended


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JMSF042J07+                                                            CTGACTGACTG
                      ____________________________________________________________
consensus                                                              CTGACTGACTG
 
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JMSF042J07+           AGTTCGGTCTTGAAGTCAGCAGATCCAGCAAGTATGAGTCCTGAAACATTGGGCTGACTG
JMSF045J06+                                   CCAGCAAGTATGAGTCCTGAAACATTGGGCTGACTG
                      ____________________________________________________________
consensus             AGTTCGGTCTTGAAGTCAGCAGATCCAGCAAGTATGAGTCCTGAAACATTGGGCTGACTG
 
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JMSF042J07+           GTTGCAGGATTAATGAAAAATTGGGTGGCAAGTTCAGCAGTCTTCCTCACATAGTTGTGA
JMSF045J06+           GTTGCAGGATTAATGAAAAATTGGGTGGCAAGTTCAGCAGTCTTCCTCACATAGTTGTGA
                      ____________________________________________________________
consensus             GTTGCAGGATTAATGAAAAATTGGGTGGCAAGTTCAGCAGTCTTCCTCACATAGTTGTGA
 
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JMSF042J07+           CGCTTCTCCATTCGAAGACGTGCAAACCGAAGAGCAGATTGTCCTCCTCTACCGTGCTTC
JMSF045J06+           CGCTTCTCCATTCGAAGACGTGCAAACCGAAGAGCAGATTGTCCTCCTCTACCGTGCTTC
                      ____________________________________________________________
consensus             CGCTTCTCCATTCGAAGACGTGCAAACCGAAGAGCAGATTGTCCTCCTCTACCGTGCTTC
 
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JMSF042J07+           TTAGGGAGGTCAACACTAAACTTGTGAAGAACCTCCCTAGTGTTGCCACTCAATGTCCCA
JMSF045J06+           TTAGGGAGGTCAACACTAAACTTGTGAAGAACCTCCCTAGTGTTGCCACTCAATGTCCCA
                      ____________________________________________________________
consensus             TTAGGGAGGTCAACACTAAACTTGTGAAGAACCTCCCTAGTGTTGCCACTCAATGTCCCA
 
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JMSF042J07+           AAAAGGGTTCCATTCCCATCCATGACAATGAATCCAAACTTGTCATCAGATTCCAAAAGT
JMSF045J06+           AAAAGGGTTCCATTCCCATCCATGACAATGAATCCAAACTTGTCATCAGATTCCAAAAGT
                      ____________________________________________________________
consensus             AAAAGGGTTCCATTCCCATCCATGACAATGAATCCAAACTTGTCATCAGATTCCAAAAGT
 
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JMSF042J07+           TCATTAAGAGCTTCAGTATGGAACTTGTTATCACATAGGTAGAGAGATGCATTTATGGGC
JMSF045J06+           TCATTAAGAGCTTCAGTATGGAACTTGTTATCACATAGGTAGAGAGATGCATTTATGGGC
                      ____________________________________________________________
consensus             TCATTAAGAGCTTCAGTATGGAACTTGTTATCACATAGGTAGAGAGATGCATTTATGGGC
 
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JMSF042J07+           CTGAATGGTTCAAAGTCAATTGTGACCTTCTTCTCTTTCCCATCATCTGTAACAATAGTT
JMSF045J06+           CTGAATGGTTCAAAGTCAATTGTGACCTTCTTCTCTTTCCCATCATCTGTAACAATAGTT
                      ____________________________________________________________
consensus             CTGAATGGTTCAAAGTCAATTGTGACCTTCTTCTCTTTCCCATCATCTGTAACAATAGTT
 
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JMSF042J07+           CCAGTGTAAAGTACAAGACCATTTGGAGGCACTTTGTTATAGAGTTTCAGCCTCTGCTGG
JMSF045J06+           CCAGTGTAAAGTACAAGACCATTTGGAGGCACTTTGTTATAGAGTTTCAGCCTCTGCTGG
                      ____________________________________________________________
consensus             CCAGTGTAAAGTACAAGACCATTTGGAGGCACTTTGTTATAGAGTTTCAGCCTCTGCTGG
 
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JMSF042J07+           GCAGATGTGATTGCACCCAAAACAGATTGCCGATTAACTCTACTTTTGATGTTTGATGCA
JMSF045J06+           GCAGATGTGATTGCACCCAAAACAGATTGCCGATTAACTCTACTTTTGATGTTTGATGCA
                      ____________________________________________________________
consensus             GCAGATGTGATTGCACCCAAAACAGATTGCCGATTAACTCTACTTTTGATGTTTGATGCA
 
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JMSF042J07+           GTTCCAAACTCATCGCCAAGCATCTTGGTAACACGAGAAATTTGATCACGAGGAGGCATA
JMSF045J06+           GTTCCAAACTCATCGCCAAGCATCTTGGTAACACGAGAAATTTGATCACGAGGAGGCATA
JMSF019D22+                                                             AGGAGGCATA
                      ____________________________________________________________
consensus             GTTCCAAACTCATCGCCAAGCATCTTGGTAACACGAGAAATTTGATCACGAGGAGGCATA
 
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JMSF042J07+           ATTAGAGAGATCATGCTGGTACCATTGCCTCGAGCAGCTTCCAATGCTTTAATTAGCTTT
JMSF045J06+           ATTAGAGAGATCATGCTGGTACCATTGCCTCGAGCAGCTTCCAATGCTTTAATTAGCTTT
JMSF019D22+           ATTAGAGAGATCATGCTGGTACCATTGCCTCGAGCAGCTTCCAATGCTTTAATTAGCTTT
                      ____________________________________________________________
consensus             ATTAGAGAGATCATGCTGGTACCATTGCCTCGAGCAGCTTCCAATGCTTTAATTAGCTTT
 
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JMSF042J07+           TTAATTTTCCATATCTCAATGTTCTTATCACTTTCATGTGCATCAGCCATTGTGAGATAT
JMSF045J06+           TTAATTTTCCATATCTCAATGTTCTTATCACTTTCATGTGCATCAGCCATTGTGAGATAT
JMSF019D22+           TTAATTTTCCATATCTCAATGTTCTTATCACTTTCATGTGCATCAGCCATTGTGAGATAT
                      ____________________________________________________________
consensus             TTAATTTTCCATATCTCAATGTTCTTATCACTTTCATGTGCATCAGCCATTGTGAGATAT
 
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JMSF042J07+           AAAGAAGCTAAAAGATCAAAGATGCGAGAAGTGTCACGAAACTATGCGGCGTTTGAG   
JMSF045J06+           AAAGAAGCTAAAAGATCAAAGATGCGAGAAGTGTCACGAAACTATGCGGCGTTTGAGGGG
JMSF019D22+           AAAGAAGCTAAAAGATCAAAGATGCGAGAAGTGTCACGAAACTATGCGGCGTTTGAGGGG
                      ____________________________________________________________
consensus             AAAGAAGCTAAAAGATCAAAGATGCGAGAAGTGTCACGAAACTATGCGGCGTTTGAGGGG
 
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JMSF045J06+           GAAACAATTGGGAGTGGTTTTATGGTATAGGAGAAACGGAATAGAAGTCTAGGGCAAACC
JMSF019D22+           GAAACAATTGGGAGTGGTTTTATGGTATAGGAGAAACGGAATAGAAGTCTAGGGCAAACC
                      ____________________________________________________________
consensus             GAAACAATTGGGAGTGGTTTTATGGTATAGGAGAAACGGAATAGAAGTCTAGGGCAAACC