Contig 013329:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001C17Sequence192013329 (2)gb|AAB07724.1|2e-12Pn47p [Ipomoea nil]744012587 (4)gb|AAB07724.1|3e-77Pn47p [Ipomoea nil]
JMSF018O12Sequence307013329 (2)gb|AAB07724.1|2e-15Pn47p [Ipomoea nil]655012587 (4)gb|AAB07724.1|5e-49Pn47p [Ipomoea nil]

Alignment

This contig is upended


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JMSF001C17+                                             GAGAGTTTCAAATGAGGGACAAATCA
                      ____________________________________________________________
consensus                                               GAGAGTTTCAAATGAGGGACAAATCA
 
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JMSF001C17+           TGGCGGCGTAGTGAATGAGATAGCGGCGGAGATCGGAGTCCAAAGGGTNTAGTAGCCCTT
JMSF018O12+                  GTAGTGAATGAGATAGCGGCGGAGATCGGAGTCCAAAGGGTNTAGTAGCCCTT
                      ____________________________________________________________
consensus             TGGCGGCGTAGTGAATGAGATAGCGGCGGAGATCGGAGTCCAAAGGGTNTAGTAGCCCTT
 
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JMSF001C17+           TCCAGTTATCACTCCCACTTAGAGCCTTCCAT                            
JMSF018O12+           TCCAGTTATCACTCCCACTTAGAGCCTTCCATNTTTCAGNTATGCCGCCCGCCATNTTCA
                      ____________________________________________________________
consensus             TCCAGTTATCACTCCCACTTAGAGCCTTCCATNTTTCAGNTATGCCGCCCGCCATNTTCA
 
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JMSF018O12+           ATTCTCTCTATTTTTTTTTTTCTTTGTTAAAGTAGTGGTGATGATGATGAAACTTCCTAC
                      ____________________________________________________________
consensus             ATTCTCTCTATTTTTTTTTTTCTTTGTTAAAGTAGTGGTGATGATGATGAAACTTCCTAC
 
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JMSF018O12+           ACAATCCCCCCTATTTATACACACCTTTCAGCCATGCCATGCCGTTCACTTCTTCTCTCC
                      ____________________________________________________________
consensus             ACAATCCCCCCTATTTATACACACCTTTCAGCCATGCCATGCCGTTCACTTCTTCTCTCC