| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008K19 | Sequence | 549 | 013317 (5) | ref|XP_009758209.1| | 1e-44 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri | 650 | 009662 (5) | ref|XP_009758209.1| | 6e-61 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri |
| JMFF014P07 | Sequence | 573 | 013317 (5) | ref|XP_009631029.1| | 2e-36 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana tomentosi | 653 | 009662 (5) | ref|XP_009758209.1| | 7e-60 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri |
| JMFF018L02 | Sequence | 580 | 013317 (5) | ref|XP_009758209.1| | 4e-45 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri | 253 | 009662 (5) | ref|XP_009608371.1| | 2e-06 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana tomentosi |
| JMSF017D21 | Sequence | 261 | 013317 (5) | 724 | 009662 (5) | emb|CDP17860.1| | 3e-63 | unnamed protein product [Coffea canephora] | |||
| JMSF027G21 | Sequence | 653 | 013317 (5) | ref|XP_009631025.1| | 2e-38 | PREDICTED: WD repeat-containing protein 26-like isoform X1 [Nicotiana tomentosi | 776 | 009662 (5) | ref|XP_009758209.1| | 5e-115 | PREDICTED: WD repeat-containing protein 26-like isoform X2 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
JMFF008K19+ CTATGCAATGTGATTACACTTTCATCCCATTTCCCATCGAGGATTTGCTG
JMFF018L02+ CCAAGTCTATGCAATGTGATTACACTTTCATCCCATTTCCCATCGAGGATTTGCTG
JMFF014P07+ CGAGGATTTGCTG
JMSF027G21+ TTTCCCATCGAGGATTTGCTG
____________________________________________________________
consensus CCAAGTCTATGCAATGTGATTACACTTTCATCCCATTTCCCATCGAGGATTTGCTG
. : . : . : . : . : . :
JMFF008K19+ CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
JMFF018L02+ CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
JMFF014P07+ CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
JMSF027G21+ CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
____________________________________________________________
consensus CATAAACAAATTTACAACTGAGGAGTGCAAATGTATCCCTGACTCCTCCTCTAGCTGTGC
. : . : . : . : . : . :
JMFF008K19+ CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
JMFF018L02+ CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
JMFF014P07+ CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
JMSF027G21+ CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
____________________________________________________________
consensus CCCTGTTTTCTTATAACCAAGAGAATATAATGCCTCAGCTATGATTTGAACAAATTCAAC
. : . : . : . : . : . :
JMFF008K19+ TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
JMFF018L02+ TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
JMFF014P07+ TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
JMSF027G21+ TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
____________________________________________________________
consensus TTTCTTGACAATTCCTTTCGAACCAACAACATCATTGCCCCCTTCACAAACTAAGGACCG
. : . : . : . : . : . :
JMFF008K19+ AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
JMFF018L02+ AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
JMFF014P07+ AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
JMSF027G21+ AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
____________________________________________________________
consensus AGCCATTGAACAGTCACTCAATGAACAATTTGTGGGATCTCTAAGAGACTTTCTGTTCAA
. : . : . : . : . : . :
JMFF008K19+ GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
JMFF018L02+ GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
JMFF014P07+ GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
JMSF027G21+ GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
____________________________________________________________
consensus GAGTTCTCCTGAAGATACCTTCACACGTTTGAATGGCGGTTCATCATCCTCTACACCTCC
. : . : . : . : . : . :
JMFF008K19+ CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
JMFF018L02+ CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
JMFF014P07+ CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
JMSF027G21+ CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
____________________________________________________________
consensus CATGAACTGTATAAATCAGTCCATATATGACTCAAATATAAATACAGGCAAAAGATCCAA
. : . : . : . : . : . :
JMFF008K19+ ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTC
JMFF018L02+ ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTC
JMFF014P07+ ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTC
JMSF027G21+ ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTCCCAGACAGTGATTTCAAGTA
____________________________________________________________
consensus ATAGTAATTCTATGCCCTCCAACAAATAAGTAGAACCTTCCCAGACAGTGATTTCAAGTA
. : . : . : . : . : . :
JMSF027G21+ TCCGAGCAAAGCAGATGCCAAAAATGGGGGAAATGTAAGTGAAATGAAAAGGGGAAAACT
____________________________________________________________
consensus TCCGAGCAAAGCAGATGCCAAAAATGGGGGAAATGTAAGTGAAATGAAAAGGGGAAAACT
. : . : . : . : . : . :
JMSF027G21+ TGTGTGTGTAAGATTACACTTGATTCTGTGGGCGACTTGATTGATGCTTGGCTATCTAAA
JMSF017D21+ CACTTGATTCTGTGGGCGACTTGATTGATGCTTGGCTATCTAAA
____________________________________________________________
consensus TGTGTGTGTAAGATTACACTTGATTCTGTGGGCGACTTGATTGATGCTTGGCTATCTAAA
. : . : . : . : . : . :
JMSF027G21+ TATCCGTAAATGGCATAGTCTCTAAGAAAAATGATTCTTGATAATGGCGGTAGGGTGGGG
JMSF017D21+ TATCCGTAAATGGCATAGTCTCTAAGAAAAATGATTCTTGATAATGGCGGTAGGGTGGGG
____________________________________________________________
consensus TATCCGTAAATGGCATAGTCTCTAAGAAAAATGATTCTTGATAATGGCGGTAGGGTGGGG
. : . : . : . : . : . :
JMSF027G21+ CAAGGGATTTGGAAAGAAGATGGAAGAAAGT
JMSF017D21+ CAAGGGATTTGGAAAGAAGATGGAAGAAAGTGAACCGTGGATTACAATTTTCTATTCATC
____________________________________________________________
consensus CAAGGGATTTGGAAAGAAGATGGAAGAAAGTGAACCGTGGATTACAATTTTCTATTCATC