| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF040F22 | Sequence | 447 | 013313 (9) | ref|XP_009786123.1| | 119 | PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris] | 755 | 011138 (2) | ref|XP_006346625.1| | 205 | PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum] |
| JMSF011I15 | Sequence | 351 | 013313 (9) | 794 | 013313 (9) | ref|XP_006368006.1| | 186 | PREDICTED: uncharacterized protein LOC102587597 [Solanum tuberosum] | |||
| JMSF012K08 | Sequence | 475 | 013313 (9) | ref|XP_009786123.1| | 112 | PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris] | 720 | 013313 (9) | ref|XP_006346625.1| | 236 | PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum] |
| JMSF016L12 | Sequence | 497 | 013313 (9) | ref|XP_006368006.1| | 70.5 | PREDICTED: uncharacterized protein LOC102587597 [Solanum tuberosum] | 710 | 013313 (9) | ref|XP_006346625.1| | 277 | PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum] |
| JMSF031O10 | Sequence | 628 | 013313 (9) | ref|XP_009786123.1| | 190 | PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris] | |||||
| JMSF034G18 | Sequence | 700 | 013313 (9) | ref|XP_009786123.1| | 303 | PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris] | 725 | 011138 (2) | ref|XP_006346625.1| | 201 | PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF016L12- A
____________________________________________________________
consensus A
. : . : . : . : . : . :
rJMSF016L12- GCCCCAAAGGCCATTTGTTGGGATCATGGCATCACCGGGCAAAATCAATCCAAATGTCTG
____________________________________________________________
consensus GCCCCAAAGGCCATTTGTTGGGATCATGGCATCACCGGGCAAAATCAATCCAAATGTCTG
. : . : . : . : . : . :
rJMSF016L12- TTTATCTCTACAATACATGCCTAAAGTATATAAAAATTAAATTTACATATTAAGGTATAT
____________________________________________________________
consensus TTTATCTCTACAATACATGCCTAAAGTATATAAAAATTAAATTTACATATTAAGGTATAT
. : . : . : . : . : . :
rJMSF012K08- CTAGTTTTGAGCATGCAAGATAGAGTTGG
rJMSF016L12- ATAGCATGTTAAAGTTGAAAAATATTGTTACCTAGTTTTGAGCATGCAAGATAGAGTTGG
rJMSF011I15- CTAGTTTTGAGCATGCAAGATAGAGTTGG
____________________________________________________________
consensus ATAGCATGTTAAAGTTGAAAAATATTGTTACCTAGTTTTGAGCATGCAAGATAGAGTTGG
. : . : . : . : . : . :
rJMSF012K08- GTTTCTTCAAAGGTTCAGCAACAGCAAGGTAGAAAAAACCCATGACTCCAGTGTGGCTCT
rJMSF016L12- GTTTCTTCAAAGGTTCAGCAACAGCAAGGTAGAAAAAACCCATGACTCCAGTGTGGCTCT
rJMSF011I15- GTTTCTTCAAAGGTTCAGCAACAGCAAGGTAGAAAAAACCCATGACTCCAGTGTGGCTCT
____________________________________________________________
consensus GTTTCTTCAAAGGTTCAGCAACAGCAAGGTAGAAAAAACCCATGACTCCAGTGTGGCTCT
. : . : . : . : . : . :
rJMSF012K08- GGCTATTGCTATAATTAGACATAATGGTTATCATCTCCCCCTCAACAATCTTGACAGAAC
rJMSF016L12- GGCTATTGCTATAATTAGACATAATGGTTATCATCTCCCCCTCAACAATCTTGACAGAAC
rJMSF011I15- GGCTATTGCTATAATTAGACATAATGGTTATCATCTCCCCCTCAACAATCTTGACAGAAC
____________________________________________________________
consensus GGCTATTGCTATAATTAGACATAATGGTTATCATCTCCCCCTCAACAATCTTGACAGAAC
. : . : . : . : . : . :
rJMSF012K08- CAGGTCGAGGATAACAAGTTGTCATTCCTACAATGTATCCCGCTTCATTTCCAGCCTCCT
rJMSF016L12- CAGGTCGAGGATAACAAGTTGTCATTCCTACAATGTATCCCGCTTCATTTCCAGCCTCCT
rJMSF011I15- CAGGTCGAGGATAACAAGTTGTCATTCCTACAATGTATCCCGCTTCA-TTCCAGCCTCCT
____________________________________________________________
consensus CAGGTCGAGGATAACAAGTTGTCATTCCTACAATGTATCCCGCTTCATTTCCAGCCTCCT
. : . : . : . : . : . :
rJMSF012K08- TTCCCTTCCCGTAAATAGGGAGGGATGAGCATATTGTCCGTCCATCCTGTCCATAAAGAG
rJMSF016L12- TTCCCTTCCCGTAAATAGGGAGGGATGAGCATATTGTCCGTCCATCCTGTCCATAAAGAG
rJMSF011I15- TTCCCTTCCCGTAAATAGGGAGGGATGAGCATATTGTCCGTCCATCCTGTCCATAAAGAG
____________________________________________________________
consensus TTCCCTTCCCGTAAATAGGGAGGGATGAGCATATTGTCCGTCCATCCTGTCCATAAAGAG
. : . : . : . : . : . :
rJMSF012K08- TTGAACCAATAGCTCCTGCGTGCTGGTGGGCAACAGCATAGATGACATCCCCTCCACTTG
rJMSF016L12- TTGAACCAATAGCTCCTGCGTGCTGGTGGGCAACAGCATAGATGACATCCCCTCCACTTG
rJMSF011I15- TTGAACCAATAGCTCCTGCGTGCTGGTGGGCAACAGCATAGATGACATCCCCTCCACTTG
JMSF034G18+ G
____________________________________________________________
consensus TTGAACCAATAGCTCCTGCGTGCTGGTGGGCAACAGCATAGATGACATCCCCTCCACTTG
. : . : . : . : . : . :
rJMSF012K08- GCAAAATTACACTTGCACTTTTGGTATGAACACATTTATCATTAACCACAGCATCAGAAC
rJMSF016L12- GCAAAATTACACTTGCACTTTTGGTATGAACACATTTATCATTAACCACAGCATCAGAAC
rJMSF011I15- GCAAAATTACACTTGCACTTTTGGTATGAACACATTTATCATTAACCACAGCATCAGAAC
JMSF034G18+ GCAAAATTACACTTGCACTTTTGGTATGAACACATTTATCATTAACCACAGCATCAGAAC
____________________________________________________________
consensus GCAAAATTACACTTGCACTTTTGGTATGAACACATTTATCATTAACCACAGCATCAGAAC
. : . : . : . : . : . :
rJMSF012K08- ATGACTCCACATAATATTCAACCTGGCACATGTGCAATTTCTTGAACTCTTTGGAATCAT
rJMSF016L12- ATGACTCCACATAATATTCAACCTGGCACATGTGCAATTTCTTGAACTCTTTGGAATCAT
rJMSF011I15- ATGACTCCACATAATATTCAACCTGGCACATGTGCAATTTCTTGAACTCTTTGGAATCAT
JMSF034G18+ ATGACTCCACATAATATTCAACCTGGCACATGTGCAATTTCTTGAACTCTTNGGAATCAT
____________________________________________________________
consensus ATGACTCCACATAATATTCAACCTGGCACATGTGCAATTTCTTGAACTCTTTGGAATCAT
. : . : . : . : . : . :
rJMSF012K08- CAGACATTTTCCAAGGATCAGCAACATCAAGTATATAAATTTTGAGA
rJMSF016L12- CAGACATTTTCCAAGGATCAGCAACATCAAGTATATAAATTTTGAGAGGCACAATGGAGG
rJMSF011I15- CAGACATTTTCCAAGGATCAGCAACATCAAGTATATAAATTTTGAGAGGCACAATGGAGG
JMSF034G18+ CAGACATTTTCCAAGGATCAGCAACATCAAGTATATAAATTTTGAGAGGCACAATGGAGG
____________________________________________________________
consensus CAGACATTTTCCAAGGATCAGCAACATCAAGTATATAAATTTTGAGAGGCACAATGGAGG
. : . : . : . : . : . :
rJMSF016L12- AATCCCAGTCAACATATTTCACAGTGTACTTTAGGTAGAGACTTCTTTT
rJMSF011I15- AATCCCAGTCAACATATTTCACAGTGTACTTTAGGTAGAGACTTCTTTTGGTATCATTAT
JMSF034G18+ AATCCCAGTCAACATATTTCACAGTGTACTTTAGGTAGAGACTTCTTTTGGTATCATTAT
____________________________________________________________
consensus AATCCCAGTCAACATATTTCACAGTGTACTTTAGGTAGAGACTTCTTTTGGTATCATTAT
. : . : . : . : . : . :
rJMSF011I15- TATATCCTTCTTTTAACTTGCATTTCATCTTGTCACCGCAACAAAACAC
JMSF034G18+ TATATCCTTCTTTTAACTTGCATTTCATCTTGTCACCGCAACAAAACACGCCTCCAATAT
____________________________________________________________
consensus TATATCCTTCTTTTAACTTGCATTTCATCTTGTCACCGCAACAAAACACGCCTCCAATAT
. : . : . : . : . : . :
JMSF034G18+ AACCTCGTTCTTTATATAACTTTTGCTCATCCATTGTGATATTATACAGGTCACACCTGC
____________________________________________________________
consensus AACCTCGTTCTTTATATAACTTTTGCTCATCCATTGTGATATTATACAGGTCACACCTGC
. : . : . : . : . : . :
JMSF034G18+ ATTCAGTGCATCCAATCTTATCTTCAACACCCCGCGTATCGATTATATGCACGTTAAGTG
____________________________________________________________
consensus ATTCAGTGCATCCAATCTTATCTTCAACACCCCGCGTATCGATTATATGCACGTTAAGTG
. : . : . : . : . : . :
JMSF034G18+ TCCATCCCTCGTCATAACCTTCGGGGACATCTGTTGGGTTCCCAAATTCTACTCCATATG
JMSF031O10+ TCGGGGACATCTGTTGGGTTCCCAACTTCTACTCCATATG
____________________________________________________________
consensus TCCATCCCTCGTCATAACCTTCGGGGACATCTGTTGGGTTCCCAACTTCTACTCCATATG
. : . : . : . : . : . :
JMSF034G18+ GATTTGGGATGTGACTGTCTGTTTTTCTCGTCTCTGCTCCGAGCCCAAAATGTTGTGTAA
JMSF031O10+ GATTTGGGATGTGACTGTCTGTTTTTCTCGTCTCTGCTCCGAGCCCAAAATGTTGTGTAA
____________________________________________________________
consensus GATTTGGGATGTGACTGTCTGTTTTTCTCGTCTCTGCTCCGAGCCCAAAATGTTGTGTAA
. : . : . : . : . : . :
JMSF034G18+ GAGTTGCACAAATTCCAGAGTTCCCCACGACTATATAATCTGATTGGTTAGACCCCAAAC
JMSF031O10+ GAGTTGCACAAATTCCAGAGTTCCCCACGACTATATAATCTGATTGGTTAGACCCCAAAC
____________________________________________________________
consensus GAGTTGCACAAATTCCAGAGTTCCCCACGACTATATAATCTGATTGGTTAGACCCCAAAC
. : . : . : . : . : . :
JMSF034G18+ TTGGCTTTTCAACACCTTGACGCAGATAGGACCTTACAACGGTCCAATGGTGGAGATATG
JMFF040F22+ CGCAGATAGGACCTTACAACGGTCCAATGGTGGAGATATG
JMSF031O10+ TTGGCTTTTCAACACCTTGACGCAGATAGGACCTTACAACGGTCCAATGGTGGAGATATG
JMSF012K08+ TCCAATGGTGGAGATATG
____________________________________________________________
consensus TTGGCTTTTCAACACCTTGACGCAGATAGGACCTTACAACGGTCCAATGGTGGAGATATG
. : . : . : . : . : . :
JMSF034G18+ CCTCGTGTAGAGGGACTGAATTCCCTGCTTCATCAACCA
JMFF040F22+ CCTCGTGTAGAGGGACTGAATTCCCTGCTTCATCAACCACTTCTGCATCAAATCCTTTGA
JMSF031O10+ CCTCGTGTAGAGGGACTGAATTCCCTGCTTCATCAACCACTTCTGCATCAAATCCTTTGA
JMSF012K08+ CCTCGTGTAGAGGGACTGAATTCCCTGCTTCATCAACCACTTCTGCATCAAATCCTTTGA
JMSF016L12+ TGCATCAAATCCTTTGA
____________________________________________________________
consensus CCTCGTGTAGAGGGACTGAATTCCCTGCTTCATCAACCACTTCTGCATCAAATCCTTTGA
. : . : . : . : . : . :
JMFF040F22+ TAGCAATATGACCCTTTGGGAAGTCGATTTTATAATAGTATTCGATTGATACCATTCCAG
JMSF031O10+ TAGCAATATGACCCTTTGGGAAGTCGATTTTATAATAGTATTCGATTGATACCATTCCAG
JMSF011I15+ TAATAGTATTCGATTGATACCATTCCAG
JMSF012K08+ TAGCAATATGACCCTTTGGGAAGTCGATTTTATAATAGTATTCGATTGATACCATTCCAG
JMSF016L12+ TAGCAATATGACCCTTTGGGAAGTCGATTTTATAATAGTATTCGATTGATACCATTCCAG
____________________________________________________________
consensus TAGCAATATGACCCTTTGGGAAGTCGATTTTATAATAGTATTCGATTGATACCATTCCAG
. : . : . : . : . : . :
JMFF040F22+ GTTCTACTTCAACCTTTGGTGATAGGAAGGTAGCTGTTTTCACCCCATTCTTATATCTTA
JMSF031O10+ GTTCTACTTCAACCTTTGGTGATAGGAAGGTAGCTGTTTTCACCCCATTCTTATATCTTA
JMSF011I15+ GTTCTACTTCAACCTTTGGTGATAGGAAGGTAGCTGTTTTCACCCCATTCTTATATCTTA
JMSF012K08+ GTTCTACTTCAACCTTTGGTGATAGGAAGGTAGCTGTTTTCACCCCATTCTTATATCTTA
JMSF016L12+ GTTCTACTTCAACCTTTGGTGATAGGAAGGTAGCTGTTTTCACCCCATTCTTATATCTTA
____________________________________________________________
consensus GTTCTACTTCAACCTTTGGTGATAGGAAGGTAGCTGTTTTCACCCCATTCTTATATCTTA
. : . : . : . : . : . :
JMFF040F22+ AAGTCTTAGCTGCTTGTGAAGTTGGAGATGATGATGTTGCCAATATTAGTAAGATTATTG
JMSF031O10+ AAGTCTTAGCTGCTTGTGAAGTTGGAGATGATGATGTTGCCAATATTAGTAAGATTATTG
JMSF011I15+ AAGTCTTAGCTGCTTGTGAAGTTGGAGATGATGATGTTGCCAATATTAGTAAGATTATTG
JMSF012K08+ AAGTCTTAGCTGCTTGTGAAGTTGGAGATGATGATGTTGCCAATATTAGTAAGATTATTG
JMSF016L12+ AAGTCTTAGCTGCTTGTGAAGTTGGAGATGATGATGTTGCCAATATTAGTAAGATTATTG
____________________________________________________________
consensus AAGTCTTAGCTGCTTGTGAAGTTGGAGATGATGATGTTGCCAATATTAGTAAGATTATTG
. : . : . : . : . : . :
JMFF040F22+ CCAGTGAAAGCATCCACCAATCTAAATTGCGTGACCACATATCTCACTCCCCTATTCTTT
JMSF031O10+ CCAGTGAAAGCATCCACCAATCTAAATTGCGTGACCACATATCTCACTCCCCTATTCTTT
JMSF011I15+ CCAGTGAAAGCATCCACCAATCTAAATTGCGTGACCACATATCTCACTCCCCTATTCTTT
JMSF012K08+ CCAGTGAAAGCATCCACCAATCTAAATTGCGTGACCACATATCTCACTCCCCTATTCTTT
JMSF016L12+ CCAGTGAAAGCATCCACCAATCTAAATTGCGTGACCACATATCTCACTCCCCTATTCTTT
____________________________________________________________
consensus CCAGTGAAAGCATCCACCAATCTAAATTGCGTGACCACATATCTCACTCCCCTATTCTTT
. : . : . : . : . : . :
JMFF040F22+ TCAGATCCTTCACTGC----------CTGATAGTTGCCGGGTGATATGATGAAGAAAACC
JMSF031O10+ TCAGATCCTTCACTGC----------CTGATAGTTGCCGGGTGATATGATGAAGAAAACC
JMSF011I15+ TCAGATCCTTCACTGC----------CTGATAGTTGCCGGGTGATATGATGAAGAAAACC
JMSF012K08+ TCAGATCCTTCACTGC----------CTGATAGTTGCCGGGTGATATGATGAAGAAAACC
JMSF016L12+ TCAGATCCTTCACTGCCTGTTGCCAACTGATAGTTGCCGGGTGATATGATGAAGAAAACC
____________________________________________________________
consensus TCAGATCCTTCACTGC----------CTGATAGTTGCCGGGTGATATGATGAAGAAAACC
. : . : . : . : . : . :
JMFF040F22+ CCAGAAATAAGTGAAGAAACAAAACCAAAGATCGAAGAAACCCACAAGTGTAAACGT
JMSF031O10+ CCAGAAATAAGTGAAGAAACAAAACCAAAGATCGAAGAAACCCACAAGTGTAAACGT
JMSF011I15+ CCAGAAATAAGTGAAGAAACAAAACCAAAGATCGAAGAAACCCACAAGTGTAAACGTGAA
JMSF012K08+ CCAGAAATAAGTGAAGAAACAAAACCAAAGATCGAAGAAACCCACAAGTGTAAACGTGAA
JMSF016L12+ CCAGAAATAAGTGAAGAAACAAAACCAAAGATCGAAGAAACCCACAAGTGTAAACGTGAA
____________________________________________________________
consensus CCAGAAATAAGTGAAGAAACAAAACCAAAGATCGAAGAAACCCACAAGTGTAAACGTGAA
. : . : . : . : . : . :
JMSF011I15+ AGCAATTCAAGTTTAGGATAGCAATATAATG
JMSF012K08+ AGCAATTCAAGTTTAGGATAGCAATATAATGTGGACGAGAAGCGAT
JMSF016L12+ AGCAATTCAAGTTTAGGATAGCAATATAATGTGGACGAGAAGCGATGACCGAGACGCTGC
____________________________________________________________
consensus AGCAATTCAAGTTTAGGATAGCAATATAATGTGGACGAGAAGCGATGACCGAGACGCTGC
. : . : . : . : . : . :
JMSF016L12+ TAAGAGCACATGCCACATTGACCAAATGGCTGTCTCCATCACTCCATAACTTTGTGGCCC
____________________________________________________________
consensus TAAGAGCACATGCCACATTGACCAAATGGCTGTCTCCATCACTCCATAACTTTGTGGCCC