Contig 013312:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF007G04-                                         ATAACGAATTACCAGAATAGAATATAAAA
                      ____________________________________________________________
consensus                                            ATAACGAATTACCAGAATAGAATATAAAA
 
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rJMSF007G04-          ACCTTCAGGTCCATAATTAGCCCGTATGATAAAGGGCATACAACTATATATAAGACTCAT
                      ____________________________________________________________
consensus             ACCTTCAGGTCCATAATTAGCCCGTATGATAAAGGGCATACAACTATATATAAGACTCAT
 
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rJMSF007G04-          AACAGCATAATTATAGAGAAATAATTACAACTATGTGACAGTAACTGATTATAAATACTA
                      ____________________________________________________________
consensus             AACAGCATAATTATAGAGAAATAATTACAACTATGTGACAGTAACTGATTATAAATACTA
 
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rJMSF007G04-          ACTAAAAGTAAAAACTCTTGATACATTCGATTCGATATTATGAATTCTCAAAAAGCTATA
rJMSF016I13-                                                            AAAAGCTATA
                      ____________________________________________________________
consensus             ACTAAAAGTAAAAACTCTTGATACATTCGATTCGATATTATGAATTCTCAAAAAGCTATA
 
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rJMSF007G04-          AACCAGGAAATGGTATAATGCTCCAATACGACTATACGAGTAAAATAAAAACGTTGAGCA
rJMSF016I13-          AACCAGGAAATGGTATAATGCTCCANTACGNCTATACGNGTAAAATAAAAACGTTGAGCA
                      ____________________________________________________________
consensus             AACCAGGAAATGGTATAATGCTCCAATACGACTATACGAGTAAAATAAAAACGTTGAGCA
 
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rJMSF007G04-          AATCAAACAGAAACAATTTACCAATAATCATATCACCGCAGATTCATATTCAAATAGATC
rJMSF016I13-          AATCAAACAGAAACAATTTACCAATAATCATATCACCGCAGATTCATATTCAAATAGATC
                      ____________________________________________________________
consensus             AATCAAACAGAAACAATTTACCAATAATCATATCACCGCAGATTCATATTCAAATAGATC
 
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rJMSF007G04-          TCCAGAAGTGGTTGCGGTTGTTGTTACATCCAGATATAGTCCTTGCGTTGATGACAAAGG
rJMSF016I13-          TCCAGAAGTGGTTGCGGTTGTTGTTACNTCCAGATATAGTCCTTGCGTTGATGACAAAGG
                      ____________________________________________________________
consensus             TCCAGAAGTGGTTGCGGTTGTTGTTACATCCAGATATAGTCCTTGCGTTGATGACAAAGG
 
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rJMSF007G04-          AGATAGACCAGTGACTCGGTGTGTCTTATGGTATAGAAGCATTACTATGATAAAAAAGCC
rJMSF016I13-          AGATAGACCAGTGACTCGGTGTGTCTTATGGTATAGAAGCATTACTATGATAAAAAAGCC
JMFN019P23-                                   CTTATGGTATAGAAGCATTACTATGATAAAAAAGCC
                      ____________________________________________________________
consensus             AGATAGACCAGTGACTCGGTGTGTCTTATGGTATAGAAGCATTACTATGATAAAAAAGCC
 
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rJMSF007G04-          AATAGCCAAACATACATCGATTACTGCTATAACTAAGAGCATGGGAAATTGTGGAAATAC
rJMSF016I13-          AATAGCCAAACATACATCGATTACTGCTATAACTAAGAGCATGGGAAATTGTGGAAATAC
JMFN019P23-           AATAGCCAAACATACATCGATTACTGCTATAACTAAGAGCATGGGAAATTGTGGAAATAC
rJMFF047F19-             AGCCAAACATACATCGATTACTGCTATAACTAAGAGCATGGGAAATTGTGGAAATAC
                      ____________________________________________________________
consensus             AATAGCCAAACATACATCGATTACTGCTATAACTAAGAGCATGGGAAATTGTGGAAATAC
 
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rJMSF007G04-          AAGAGTATAAATACACATTAAATTACAAGTATTATAAACTAAAATTAGAATTGACAAACA
rJMSF016I13-          NAGAGTATNANTACACATTAAATTACAAGTATTATAAACTAAAATTAGAATTGACAAACA
JMFN019P23-           AAGAGTATAAATACACATTAAATTACAAGTATTATAAACTAAAATTAGAATTGACAAACA
rJMFF047F19-          AAGAGTATAAATACACATTAAATTACAAGTATTATAAACTAAAATTAGAATTGACAAACA
                      ____________________________________________________________
consensus             AAGAGTATAAATACACATTAAATTACAAGTATTATAAACTAAAATTAGAATTGACAAACA
 
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rJMSF007G04-          TGAAATTTTCATAAAATGGAAATATAATTCAAATATTCAATTGAATTATTGTATATAAAG
rJMSF016I13-          TGAAATTTTCNTAAAATGGAAATATAATTCAAATATTCAATTGAATTATTGTATATAAAG
JMFN019P23-           TGAAATTTTCATAAAATGGAAATATAATTCAAATATTCAATTGAATTATTGTATATAAAG
rJMFF047F19-          TGAAATTTTCATAAAATGGAAATATAATTCAAATATTCAATTGAATTATTGTATATAAAG
rJMFF001B22-           GAAATTTTCATAAAATGGAAATATAATTCAAATATTCAATTGAATTATTGTATATAAAG
                      ____________________________________________________________
consensus             TGAAATTTTCATAAAATGGAAATATAATTCAAATATTCAATTGAATTATTGTATATAAAG
 
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rJMSF007G04-          ATTACCTCATAAAATCATAAAACAAAATAGATATCGTGTTAGACTATTAACAGGAAACGA
rJMSF016I13-          ATTACCTCNTAAAATCATAAAACAAAATAGATATCGTGTTAGACTATTAACAGGANACGA
JMFN019P23-           ATTACCTCATAAAATCATAAAACAAAATAGATATCGTGTTAGACTATTAACAGGAAACGA
rJMFF047F19-          ATTACCTCATAAAATCATAAAACAAAATAGATATCGTGTTAGACTATTAACAGGAAACGA
rJMFF001B22-          ATTACCTCATAAAATCATAAAACAAAATAGATATCGTGTTAGACTATTAACAGGAAACGA
                      ____________________________________________________________
consensus             ATTACCTCATAAAATCATAAAACAAAATAGATATCGTGTTAGACTATTAACAGGAAACGA
 
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rJMSF007G04-          GCGTTCTAAGAATCTGAGATATGTATACTCCTAGAAAAAGGGATTTAATGCGTTCTGAGA
rJMSF016I13-          GCGTTCTAAGAATCTGAGATATGTATACTCCTAGAAAAAGGGATTTANTGCGTTCTGAGA
JMFN019P23-           GCGTTCTAAGAATCTGAGATATGTATACTCCTAGAAAAAGGGATTTAATGCGTTCTGAGA
rJMFF047F19-          GCGTTCTAAGAATCTGAGATATGTATACTCCTAGAAAAAGGGATTTAATGCGTTCTGAGA
rJMFF001B22-          GCGTTCTAAGAATCTGAGATATGTATACTCCTAGAAAAAGGGATTTAATGCGTTCTGAGA
                      ____________________________________________________________
consensus             GCGTTCTAAGAATCTGAGATATGTATACTCCTAGAAAAAGGGATTTAATGCGTTCTGAGA
 
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rJMSF007G04-          GATATGTATAATCATAATCATAGAA                                   
rJMSF016I13-          GATATGTNTAATCATAATCATAGAAAAAGGGATTTAATAGCGTTAAATTGATAGGAATTA
JMFN019P23-           GATATGTATAATCATAATCATAGAAAAAGGGATTTAATAGCGTTAAATTGATAGGAATTA
rJMFF047F19-          GATATGTATAATCATAATCATAGAAAAAGGGATTTAATAGCGTTAAATTGATAGGAATTA
rJMFF001B22-          GATATGTATAATCATAATCATAGAAAAAGGGATTTAATAGCGTTAAATTGATAGGAATTA
                      ____________________________________________________________
consensus             GATATGTATAATCATAATCATAGAAAAAGGGATTTAATAGCGTTAAATTGATAGGAATTA
 
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rJMSF016I13-          GATGAAGAAATTGACGGTTATACCTCTACTGATGTTGCCGTATTGAATTGATCANACTGT
JMFN019P23-           GATGAAGAAATTGACGGTTATACCTCTACTGATGTTGCCGTATTGAATTGATCAAACTGT
rJMFF047F19-          GATGAAGAAATTGACGGTTATACCTCTACTGATGTTGCCGTATTGAATTGATCAAACTGT
rJMFF001B22-          GATGAAGAAATTGACGGTTATACCTCTACTGATGTTGCCGTATTGAATTGATCAAACTGT
                      ____________________________________________________________
consensus             GATGAAGAAATTGACGGTTATACCTCTACTGATGTTGCCGTATTGAATTGATCAAACTGT
 
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rJMSF016I13-          TAAGCTTTGCTGGTGGTGTTTACGATTGTATAGTGAGATGCTTGCCCTTATTAGA     
JMFN019P23-           TAAGCTTTGCTGGTGGTGTTTACGATTGTGTAGTGAGATGCTTGCCCTTATTAGATCGGA
rJMFF047F19-          TAAGCTTTGCTGGTGGTGTTTACGATTGTGTAGTGAGATGCTTGCCCTTATTAGATCGGA
rJMFF001B22-          TAAGCTTTGCTGGTGGTGTTTACGATTGTGTAGTGAGATGCTTGCCCTTATTAGATCGGA
JMFN038N17+                                                             TTAGATCGGA
                      ____________________________________________________________
consensus             TAAGCTTTGCTGGTGGTGTTTACGATTGTGTAGTGAGATGCTTGCCCTTATTAGATCGGA
 
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JMFN019P23-           CAAGAATCATGATAATCGCAGCTCAAGTCGAGATCTGTGAAAGGCGGGTAGGCAAAAAG 
rJMFF047F19-          CAAGAATCATGATAATCGCAGCTCAAGTCGAGATCTGTGAAAGGCGGGTAGGCAAAAAGG
rJMFF001B22-          CAAGAATCATGATAATCGCAGCTCAAGTCGAGATCTGTGAAAGGCGGGTAGGCAAAAAGG
JMFN038N17+           CAAGAATCATGATAATCGCAGCTCAAGTCGAGATCTGTGAAAGGCGGGTAGGCAAAAAGG
JMFF047F19+                           CGCAGCTCAAGTCGAGATCTGTGAAAGGCGGGTAGGCAAAAAGG
                      ____________________________________________________________
consensus             CAAGAATCATGATAATCGCAGCTCAAGTCGAGATCTGTGAAAGGCGGGTAGGCAAAAAGG
 
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rJMFF047F19-          ACGCAACGCACAGGAGAGGAGGAGCCGGGCAAACCACGTACCACCTCCCCTCCAAAAC-A
rJMFF001B22-          ACGCAACGCACAGGAGAGGAGGAGCCGGGNAAACCACGTACCACCTCCCCTCCAAAACAA
JMFN038N17+           ACGCAACGCACAGGAGAGGAGGAGCCGGGCAAACCACGTACCACCTCCCCTCCAAAACAA
JMFF047F19+           ACGCAACGCACAGGAGAGGAGGAGCCGGGCAAACCACGTACCACCTCCCCTCCAAAACAA
JMSF016I13+                                                                AAAACAA
                      ____________________________________________________________
consensus             ACGCAACGCACAGGAGAGGAGGAGCCGGGCAAACCACGTACCACCTCCCCTCCAAAACAA
 
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rJMFF047F19-          GAAACATAAATTTTATTATCTTTTTTGA                                
rJMFF001B22-          GAAACATAAATTTTATTATCTTTTTTGACCTGCCATGAGAGCGCACCCGTCATGGCAAAG
JMFN038N17+           GAAACATAAATTTTATTATCTTTTTTGACCTGCCATGAGAGCGCACCCGTCATGGCAAAG
JMFF047F19+           GAAACATAAATTTTATTATCTTTTTTGACCTGCCATGAGAGCGCACCCGTCATGGCAAAG
JMSF016I13+           GAAACATAAATTTTATTATCTTTTTTGACCTGCCATGAGAGCGCACCCGTCATGGCAAAG
                      ____________________________________________________________
consensus             GAAACATAAATTTTATTATCTTTTTTGACCTGCCATGAGAGCGCACCCGTCATGGCAAAG
 
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rJMFF001B22-          GTCGACTAAACATCGACACCTTTTTTCACTCCGCTCTCGTTTACCTTTGATTTCATTCTC
JMFN038N17+           GTCGACTAAACATCGACACCTTTTTTCACTCCGCTCTCGTTTACCTTTGATTTCATTCTC
JMFN030P24+                                       CTCCGCTCTCGTTTACCTTTGATTTCATTCTC
JMFF047F19+           GTCGACTAAACATCGACACCTTTTTTCACTCCGCTCTCGTTTACCTTTGATTTCATTCTC
JMSF016I13+           GTCGACTAAACATCGACACCTTTTTTCACTCCGCTCTCGTTTACCTTTGATTTCATTCTC
                      ____________________________________________________________
consensus             GTCGACTAAACATCGACACCTTTTTTCACTCCGCTCTCGTTTACCTTTGATTTCATTCTC
 
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rJMFF001B22-          ATACAGATGCACGCATAACATTAAACTATCATACATGCAGCTGAATATCTGATTAACAAT
JMFN038N17+           ATACAGATGCACGCATAACATTAAACTATCATACATGCAGCTGAATATCTGATTAACAAT
JMFN030P24+           ATACAGATGCACGCATAACATTAAACTATCATACATGCAGCTGAATATCTGATTAACAAT
JMFF047F19+           ATACAGATGCACGCATAACATTAAACTATCATACATGCAGCTGAATATCTGATTAACAAT
JMSF007G04+                                                                   CAAT
JMSF016I13+           ATACAGATGCACGCATAACATTAAACTATCATACATGCAGCTGAATATCTGATTAACAAT
                      ____________________________________________________________
consensus             ATACAGATGCACGCATAACATTAAACTATCATACATGCAGCTGAATATCTGATTAACAAT
 
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rJMFF001B22-          CTTCACCATCNGAACATCAGTGATTCGGAAAGTACTCCGCCGCTCANACTTCGTTCCGGC
JMFN038N17+           CTTCACCATC-GAACATCAGTGATTCGG-AAGTACTCCGCCGCTCAGACTTCGTTCCGGC
JMFN030P24+           CTTCACCATC-GAACATCAGTGATTCGG-AAGTACTCCGCCGCTCAGACTTCGTTCCGGC
JMFF047F19+           CTTCACCATC-GAACATCAGTGATTCGG-AAGTACTCCGCCGCTCAGACTTCGTTCCGGC
JMSF007G04+           CTTCACCATC-GAACATCAGTGATTCGG-AAGTACTCCGCCGCTCAGACTTCGTTCCGGC
JMSF016I13+           CTTCACCATC-GAACATCAGTGATTCGG-AAGTACTCCGCCGCTCAGACTTCGTTCCGGC
                      ____________________________________________________________
consensus             CTTCACCATC-GAACATCAGTGATTCGG-AAGTACTCCGCCGCTCAGACTTCGTTCCGGC
 
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rJMFF001B22-          AGCAAAATTCCAATTCNCTCTCGCGACTCCCTTGGAGACCTAAAGTCT            
JMFN038N17+           AGCAAAATTCCAATTCGCTCTCGCGACTCCCTTGAAGACCTAAAGTCTTGTAGAGAATCA
JMFN030P24+           AGCAAAATTCCAATTCGCTCTCGCGACTCCCTTGAAGACCTAAAGTCTTGTAGAGAATCA
JMFF047F19+           AGCAAAATTCCAATTCGCTCTCGCGACTCCCTTGAAGACCTAAAGTCTTGTAGAGAATCA
JMSF007G04+           AGCAAAATTCCAATTCGCTCTCGCGACTCCCTTGAAGACCTAAAGTCTTGTAGAGAATCA
JMSF016I13+           AGCAAAATTCCAATTCGCTCTCGCGACTCCCTTGAAGACCTAAAGTCTTGTAGAGAATCA
                      ____________________________________________________________
consensus             AGCAAAATTCCAATTCGCTCTCGCGACTCCCTTGAAGACCTAAAGTCTTGTAGAGAATCA
 
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JMFN038N17+           CATCTTTGAACTATGTCTGCAGATCTATCATGGCCTGAATCAGATCAACCGGATCTCCAT
JMFN030P24+           CATCTTTGAACTATGTCTGCAGATCTATCATGGCCTGAATCAGATCAACCGGATCTCCAT
JMFF047F19+           CATCTTTGAACTATGTCTGCAGATCTATCATGGCCTGAATCAGATCAACCGGATCTCCAT
JMSF007G04+           CATCTTTGAACTATGTCTGCAGATCTATCATGGCCTGAATCAGATCAACCGGATCTCCAT
JMSF016I13+           CATCTTTGAACTATGTCTGCAGATCTATCATGGCCTGAATCAGATCAACCGGATCTCCAT
                      ____________________________________________________________
consensus             CATCTTTGAACTATGTCTGCAGATCTATCATGGCCTGAATCAGATCAACCGGATCTCCAT
 
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JMFN038N17+           CGATGAAAAGAAACGACTTCTACTATACCAATCGAAAAACGATGAAGCCATGGTCTACAG
JMFN030P24+           CGATGAAAAGAAACGACTTCTACTATACCAATCGAAAAACGATGAAGCCATGGTCTACAG
JMFF047F19+           CGATGAAAAGAAACGACTTCTACTATACCAATCGAAAAACGATGAAGCCATGGTCTACAG
JMSF007G04+           CGATGAAAAGAAACGACTTCTACTATACCAATCGAAAAACGATGAAGCCATGGTCTACAG
JMSF016I13+           CGATGAAAAGAAACGACTTCTACTATACCAATCGAAAAACGATGAAGCCATGGTCTACAG
                      ____________________________________________________________
consensus             CGATGAAAAGAAACGACTTCTACTATACCAATCGAAAAACGATGAAGCCATGGTCTACAG
 
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JMFN038N17+           ATAGATCACCGGTCGATCTACAACAATCTCAAG-AAAAAATGGCAAAAAGAGAAAAAACA
JMFN030P24+           ATAGATCACCGGTCGATCTACAACAATCTCAAG-AAAAAATGGCAAAAAGAGAAAAAACA
JMFF047F19+           ATAGATCACCGGTCGATCTACAACAATCTCAAGAAAAAAATGGCAAAAAGAGAAAAAACA
JMSF007G04+           ATAGATCACCGGTCGATCTACAACAATCTCAAG-AAAAAATGGCAAAAAGAGAAAAAACA
JMSF016I13+           ATAGATCACCGGTCGATCTACAACAATCTCAAG-AAAAAATGGCAAAAAGAGAAAAAACA
                      ____________________________________________________________
consensus             ATAGATCACCGGTCGATCTACAACAATCTCAAG-AAAAAATGGCAAAAAGAGAAAAAACA
 
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JMFN038N17+           AAGAAGAGATCTAAG                                             
JMFN030P24+           AAGAAGAGATCTAAG                                             
JMFF047F19+           AAGAAGAGATCTAAGAAAAATGAGAGATCTGAGAAGATGAGGTTAGGAGAAATGAA    
JMSF007G04+           AAGAAGAGATCTAAGAAAAATGAGAGATCTGAGAAGATGAGGTTAGGAGAAATGAA    
JMSF016I13+           AAGAAGAGATCTAAGAAAAATGAGAGATCTGAGAAGATGAGGTTAGGAGAAATGAATGGC
                      ____________________________________________________________
consensus             AAGAAGAGATCTAAGAAAAATGAGAGATCTGAGAAGATGAGGTTAGGAGAAATGAATGGC