Contig 013311:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF029G23-                 ATTGCAGATATGCAATAATCAAAGTATATTCATGGTGCATATATATATATATA
                      ____________________________________________________________
consensus                    ATTGCAGATATGCAATAATCAAAGTATATTCATGGTGCATATATATATATATA
 
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rJMSF029G23-          TATATCTATGGGGTAAAAGTTAAAGGTGGTGGGTATGANTGGTGTTGGCGAAGTTAATTC
rJMSF016H01-                   GGGGTAAAAGTTAAAGGTGGTGGGTATGANTGGTGTTGGCGAAGTTAATTC
                      ____________________________________________________________
consensus             TATATCTATGGGGTAAAAGTTAAAGGTGGTGGGTATGANTGGTGTTGGCGAAGTTAATTC
 
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rJMSF029G23-          TGTAAAGTAAATAAAGGTACAACAAAAATTAAGATGTCCAATCATCGTGGTCACATGGAG
rJMSF016H01-          TGTAAAGTAAATAANGGTACAACAAAAATTAAGATGTCCAATCATCGTGGTCACATGGAG
                      ____________________________________________________________
consensus             TGTAAAGTAAATAAAGGTACAACAAAAATTAAGATGTCCAATCATCGTGGTCACATGGAG
 
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rJMSF029G23-          AGCAACCTTCTTGAGCAATGTCAGTTATTTGCAAAGCCGCATCATATATGACTCCGTTTT
rJMSF016H01-          AGCAACCTTCTTGAGCAATGTCAGTTATTTGCAAAGCCGCATCATATATGACTCCGTTTT
                      ____________________________________________________________
consensus             AGCAACCTTCTTGAGCAATGTCAGTTATTTGCAAAGCCGCATCATATATGACTCCGTTTT
 
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rJMSF029G23-          TCCAATCGGCGGGAATTACATTCTTAGCCCAATACCATTTGCCGTCGTATCCTGCGGTCA
rJMSF016H01-          TCCAATCGGCGGGCATTACATTCTTAGCCCAATACCATTTGCCGTCGTATCCTGCGGTCA
                      ____________________________________________________________
consensus             TCCAATCGGCGGGCATTACATTCTTAGCCCAATACCATTTGCCGTCGTATCCTGCGGTCA
 
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rJMSF029G23-          CAACAAATCGGAATTGCAAAGCCCCGCTGGGGACTCTGCTCGTGTCCCAAATAGCTCCAT
rJMSF016H01-          CAACAAATCGGAATTGCAAAGCCCCGCTGGGGACTCTGCTCGTGTCCCAAATAGCTCCAT
                      ____________________________________________________________
consensus             CAACAAATCGGAATTGCAAAGCCCCGCTGGGGACTCTGCTCGTGTCCCAAATAGCTCCAT
 
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rJMSF029G23-          GATTTCTGCTCATAAAGTTCCAGTTTGAGGACCCTACCTGAGCAACGTCAACAGCAACAA
rJMSF016H01-          GATTTCTGCTCATAAAGTTCCAGTTTGAGGACCCTACCTGAGCAACGTCAACAGCAACAA
JMSF029G23+                                                 TGAGCNACGTCAACAGCAACAA
                      ____________________________________________________________
consensus             GATTTCTGCTCATAAAGTTCCAGTTTGAGGACCCTACCTGAGCAACGTCAACAGCAACAA
 
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rJMSF029G23-          TTTCAGTCTGACCACCTTGGTACAGGAATTTGATTGCAAGGTAATTAGGTTTCTGGCTTG
rJMSF016H01-          TTTCAGTCTGACCACCTTGGTACAGGAATTTGATTGCAAGGTAATTAGGTTTCTGGCTTG
JMSF029G23+           TTTCAGTCTGACCACCTTGGTACAGGAATTTGATTGCAAGGTAATTAGGTTTCTGGCTTG
                      ____________________________________________________________
consensus             TTTCAGTCTGACCACCTTGGTACAGGAATTTGATTGCAAGGTAATTAGGTTTCTGGCTTG
 
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rJMSF029G23-          TTTCTTCGACAAAGACCGCCAGATTCTTGGTTTTATAATTACAAGGCACCCTTTTATAGT
rJMSF016H01-          TTTCTTCGACAAAGACCGCCAGATTCTTGGTTTTATAATTACAAGGCACCCTTTTATAGT
JMSF029G23+           TTTCTTCGACAAAGACCGCCAGATTCTTGGTTTTATAATTACAAGGCACCCTTTTATAGT
                      ____________________________________________________________
consensus             TTTCTTCGACAAAGACCGCCAGATTCTTGGTTTTATAATTACAAGGCACCCTTTTATAGT
 
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rJMSF029G23-          CGACATCAACAATGCCAAGCTTGAGGAGGTCTTGATCCTTGCCCTGAGTAGCCATGGCTC
rJMSF016H01-          CGACATCAACAATGCCAAGCTTGAGGAGGTCTTGATCCTTGCCCTGAGTAGCCATGGCTC
JMSF029G23+           CGACATCAACAATGCCAAGCTTGAGGAGGTCTTGATCCTTGCCCTGAGTAGCCATGGCTC
                      ____________________________________________________________
consensus             CGACATCAACAATGCCAAGCTTGAGGAGGTCTTGATCCTTGCCCTGAGTAGCCATGGCTC
 
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rJMSF029G23-          TGAAAGCTCTGCTGCTGACGACAAAATCTGTNTGGTTATTAGTGTTGAGATCAGTANCCA
rJMSF016H01-          TGAAAGCTCTGCTGCTGATGACAAAATCTGTTTGGTTATTAGTGTTGAGATCAGTAACCA
JMSF029G23+           TGAAAGCTCTGCTGCTGACGACAAAATCTGTTTGGTTATTAGTGTTGAGATCAGTAACCA
                      ____________________________________________________________
consensus             TGAAAGCTCTGCTGCTGACGACAAAATCTGTTTGGTTATTAGTGTTGAGATCAGTAACCA
 
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rJMSF029G23-          TGANTGTGGTCCCNTGCTTA                                        
rJMSF016H01-          TGATTGTGGTCCCTTGCTTAGTACACAGATTTGGGTCCTTGCATCTCATCTGAAAACATG
JMSF029G23+           TGATTGTGGTCCCTTGCTTAGTACACAGATTTGGGTCCTTGCATCTCATCTGAAAACATG
                      ____________________________________________________________
consensus             TGATTGTGGTCCCTTGCTTAGTACACAGATTTGGGTCCTTGCATCTCATCTGAAAACATG
 
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rJMSF016H01-          CACCGCAACCATCACCATCCTTGTAAAGGGTAGGGACTGCGGCAGCAAGATGGCCTCCGT
JMSF029G23+           CACCGCAACCATCACCATCCTTGTAAAGGGTAGGGACTGCGGCAGCAAGATGGCCTCCGT
                      ____________________________________________________________
consensus             CACCGCAACCATCACCATCCTTGTAAAGGGTAGGGACTGCGGCAGCAAGATGGCCTCCGT
 
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rJMSF016H01-          TGAAACCAATAGCCATGGAGCCATATCC                                
JMSF029G23+           TGAAACCAATAGCCATGGAGCGATATCCGCAAGCGCCAGACTGGAGGACGGAAGCTTTGG
JMSF016H01+                                              CCAGACTGGAGGACGGAAGCTTTGG
                      ____________________________________________________________
consensus             TGAAACCAATAGCCATGGAGCGATATCCGCAAGCGCCAGACTGGAGGACGGAAGCTTTGG
 
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JMSF029G23+           AAAAGAAAGAGACTTTGGTTTGATGGACGCAGCGATCGCAAGCGGATGCAGAGGAGATGA
JMSF016H01+           AAAAGAAAGAGACTTTGGTTTGATGGACGCAGCGATCGCAAGCGGATGCAGAGGAGATGA
                      ____________________________________________________________
consensus             AAAAGAAAGAGACTTTGGTTTGATGGACGCAGCGATCGCAAGCGGATGCAGAGGAGATGA
 
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JMSF029G23+           GGAGGATGCAGACAAGTAAGCAGAGCGAGAGATGACGATGAGGAGGAGCCATTATATTGT
JMSF016H01+           GGAGGATGCAGACAAGTAAGCAGAGCGAGAGATGACGATGAGGAGGAGCCATTATATTGT
                      ____________________________________________________________
consensus             GGAGGATGCAGACAAGTAAGCAGAGCGAGAGATGACGATGAGGAGGAGCCATTATATTGT
 
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JMSF029G23+           ATTAAAGAAATTAACCCTTAGCTTTGAATTGGAGATCGAGATAGAAATCAGGGGAGAGAA
JMSF016H01+           ATTAAAGAAATTAACCCTTAGCTTTGAATTGGAGATCGAGATAGAAATCAGGGGAGAGAA
                      ____________________________________________________________
consensus             ATTAAAGAAATTAACCCTTAGCTTTGAATTGGAGATCGAGATAGAAATCAGGGGAGAGAA
 
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JMSF029G23+           TATGTGGTCGATCTTGATCTTGATCTTGATCTTGACCTTGAGAGAATTGAAGTACAT   
JMSF016H01+           TATGTGGTCGATCTTGATCTTGATCTTGATCTTGACCTTGAGAGAATTGAAGTACATACC
                      ____________________________________________________________
consensus             TATGTGGTCGATCTTGATCTTGATCTTGATCTTGACCTTGAGAGAATTGAAGTACATACC