Contig 013303:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS146B05Sequence632013303 (4)emb|CDP17304.1|6e-56unnamed protein product [Coffea canephora]
JMSF009N19Sequence320013303 (4)gb|EYU43231.1|5e-16hypothetical protein MIMGU_mgv1a009769mg [Erythranthe guttata]505022463ref|XP_009590530.1|8e-06PREDICTED: josephin-like protein [Nicotiana tomentosiformis]
JMSF015G01Sequence208013303 (4)725013303 (4)ref|XP_009344408.1|2e-92PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD12-like [Pyrus

Alignment

This contig is upended


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rJMSF015G01-                                   ATGATTTGTTGTGACATTGAACATATGTAAATACA
                      ____________________________________________________________
consensus                                      ATGATTTGTTGTGACATTGAACATATGTAAATACA
 
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rJMSF015G01-          CACAATGAATTTGATAATGAATGTTCTGTTTTAATATTAGTCGGGCATCACCCGAATGAA
                      ____________________________________________________________
consensus             CACAATGAATTTGATAATGAATGTTCTGTTTTAATATTAGTCGGGCATCACCCGAATGAA
 
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rJMSF015G01-          ATGTAGAAAAATAAATAAATAAATAAATAATCTATATTCATAACTAGTGATCATCAAGAG
                      ____________________________________________________________
consensus             ATGTAGAAAAATAAATAAATAAATAAATAATCTATATTCATAACTAGTGATCATCAAGAG
 
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rJMSF015G01-          AAATCCACTCTAACTCTAGATCAATTTCTCCTGATTCTACATTCTGCAACTTGAGGAATA
                      ____________________________________________________________
consensus             AAATCCACTCTAACTCTAGATCAATTTCTCCTGATTCTACATTCTGCAACTTGAGGAATA
 
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rJMSF015G01-          CTTCTTGTTTAACCTTCCCATCAACAATGTTGATAGTACTATCCTGAATGAGCGCATTAT
                      ____________________________________________________________
consensus             CTTCTTGTTTAACCTTCCCATCAACAATGTTGATAGTACTATCCTGAATGAGCGCATTAT
 
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rJMSF015G01-          CATGGGATTTCAGCCACTTCCCTATCTGCATGTCACCAAATATTCTGGGATCTCCAAATG
                      ____________________________________________________________
consensus             CATGGGATTTCAGCCACTTCCCTATCTGCATGTCACCAAATATTCTGGGATCTCCAAATG
 
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rJMSF015G01-          CCATGGCTGAGGTTAACATAGGCTGAATGTCAACCTCTGCCTCCCCCATTATATCATCAG
                      ____________________________________________________________
consensus             CCATGGCTGAGGTTAACATAGGCTGAATGTCAACCTCTGCCTCCCCCATTATATCATCAG
 
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rJMSF015G01-          CACTAAATGTGTCATGATCGTATACTTGCAGCTTTAGTGCCCCATGATGTTGAGGAACAG
                      ____________________________________________________________
consensus             CACTAAATGTGTCATGATCGTATACTTGCAGCTTTAGTGCCCCATGATGTTGAGGAACAG
 
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rJMSF015G01-          AAAGCATGAGTTCTTCATTCCAGACAGGATTCAAATTGCTCTTTATTACGTTCGTTCGCA
                      ____________________________________________________________
consensus             AAAGCATGAGTTCTTCATTCCAGACAGGATTCAAATTGCTCTTTATTACGTTCGTTCGCA
 
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rJMSF015G01-          CTGTCTGCTTCCCAAGTGTGAGGAGAACATATGGATCACTTGTGAGCATGTCTCGGATTG
JMFS146B05+                             TGAGGAGAACATATGGATCACTTGTGAGCATGTCTCGGATTG
                      ____________________________________________________________
consensus             CTGTCTGCTTCCCAAGTGTGAGGAGAACATATGGATCACTTGTGAGCATGTCTCGGATTG
 
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rJMSF015G01-          CTAGGTTTGTTCCTTTGATTACCTTAACCTCCAACATTCCGATGAATTCGACCATGCCTA
JMFS146B05+           CTAGGTTTGTTCCTTTGATTACCTTAACCTTCAACATTCCGATGAATTCGACCATGCCTA
                      ____________________________________________________________
consensus             CTAGGTTTGTTCCTTTGATTACCTTAACCTTCAACATTCCGATGAATTCGACCATGCCTA
 
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rJMSF015G01-          CAGAATTGTCCACTGAACTTGAACTCCTAAAGCTTTCCATACTCTTCCTAGATG-AAAAC
JMFS146B05+           CAGAATTGTCCACTGAACTTGAACTCCTAAAGCTTTCCATACTCTTCCTAGATGAAAAAC
                      ____________________________________________________________
consensus             CAGAATTGTCCACTGAACTTGAACTCCTAAAGCTTTCCATACTCTTCCTAGATGAAAAAC
 
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rJMSF015G01-          TCGATTGAAGAGACTGATTCTTTGGAGCTGA                             
JMFS146B05+           TCGATTGAAGAGACTGATTCTTTGGAGCTGACAAGATGCGCAAACTTGGTTTGAGGAAGT
                      ____________________________________________________________
consensus             TCGATTGAAGAGACTGATTCTTTGGAGCTGACAAGATGCGCAAACTTGGTTTGAGGAAGT
 
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JMFS146B05+           CTTGAAGCTCATATTTTGACCTGATAAATTTAGCACGCTGGTCATGGCCGGCATTTGGTC
                      ____________________________________________________________
consensus             CTTGAAGCTCATATTTTGACCTGATAAATTTAGCACGCTGGTCATGGCCGGCATTTGGTC
 
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JMFS146B05+           CAGGTTTAGAAACTCCTTCAGGGATATAAGCTTCATAGATTGAATTTGCGGACGCATTTC
                      ____________________________________________________________
consensus             CAGGTTTAGAAACTCCTTCAGGGATATAAGCTTCATAGATTGAATTTGCGGACGCATTTC
 
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JMFS146B05+           CTCCAACCTCAATCATTGCATCAATTTCATTATCCGACCATTCATCTAAAGTAACAGACA
                      ____________________________________________________________
consensus             CTCCAACCTCAATCATTGCATCAATTTCATTATCCGACCATTCATCTAAAGTAACAGACA
 
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JMFS146B05+           AAACGCCCATTTAGGGTCAGGAGCACCGCAATCAGCACATACACGATTTTCACTTTGGAG
JMSF009N19+               GCCCATTTAGGGTCAGGAGCACCGCAATCAGCACATACACGATTTTCACTTTGGAG
                      ____________________________________________________________
consensus             AAACGCCCATTTAGGGTCAGGAGCACCGCAATCAGCACATACACGATTTTCACTTTGGAG
 
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JMFS146B05+           CATGAGGTCTCTTAGTCTTCTTTTACTTGAAGATGGTCTGCTAAGACCAGTTGCTCGTTG
JMSF009N19+           CATGAGGTCTCTTAGTCTTCTTTTACTTGAAGATGGTCTGCTAAGACCAGTTGCTCGTTG
JMSF015G01+                                        AAGATGGTCTGCTAAGACCAGTTGCTCGTTG
                      ____________________________________________________________
consensus             CATGAGGTCTCTTAGTCTTCTTTTACTTGAAGATGGTCTGCTAAGACCAGTTGCTCGTTG
 
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JMFS146B05+           GCTCATGGCTCTCTACCAATATGCTGCTACCATTCAACAAATTAAAGCACGGATTTGTGA
JMSF009N19+           GCTCATGGCTCTCTACCAATATGCTGCTACCATTCAACAAATTAAAGCACGGATTTGTGA
JMSF015G01+           GCTCATGGCTCTCTACCAATATGCTGCTACCATTCAACAAATTAAAG---GGATTTGTGA
                      ____________________________________________________________
consensus             GCTCATGGCTCTCTACCAATATGCTGCTACCATTCAACAAATTAAAGCACGGATTTGTGA
 
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JMFS146B05+           ATGTTGCCGGTTTTGCTCTCCAGCTGACGGCGAAATGCAGAGACAAGGTA          
JMSF009N19+           ATGTTGCCGGTTTTGCTCTCCAGCTGACGGCGAAATGCAGAGACAAGGTAGAGAGAGAAA
JMSF015G01+           ATGTTGCCGGTTTTGCTCTCCAGCTGACGGCGAAATGCAGAGACAAGGTAGAGAGAGAAA
                      ____________________________________________________________
consensus             ATGTTGCCGGTTTTGCTCTCCAGCTGACGGCGAAATGCAGAGACAAGGTAGAGAGAGAAA
 
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JMSF009N19+           AGTAGAGAGAGAGAGAGAAAAGTAGAGAGAGAC                           
JMSF015G01+           AGTAGAGAGAGAGAGAGAAAAGTAGAGAGAGACGACAGCAAAAAGAAGCGAATGTTTATC
                      ____________________________________________________________
consensus             AGTAGAGAGAGAGAGAGAAAAGTAGAGAGAGACGACAGCAAAAAGAAGCGAATGTTTATC