Contig 013299:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS002C10Sequence463013299 (8)ref|XP_006357886.1|3e-66PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum]
JMFS008G04Sequence600013299 (8)ref|XP_006357886.1|9e-93PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum]
JMFS029A10Sequence594013299 (8)ref|XP_006357886.1|3e-94PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum]
JMFS075G04Sequence627013299 (8)ref|XP_006357886.1|6e-99PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum]
JMFS104B10Sequence594013299 (8)ref|XP_006357886.1|4e-91PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum]
JMFS127G07Sequence600013299 (8)ref|XP_006357886.1|9e-93PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum]
JMSF005C15Sequence236013299 (8)ref|XP_006357886.1|3e-19PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum]
JMSF014C08Sequence486013299 (8)ref|XP_006357886.1|4e-66PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum]781002017 (2)ref|XP_009757679.1|2e-62PREDICTED: heat shock 70 kDa protein 17 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS127G07+ CAGTAAGCAGCCCATTTCTCTCT
JMFS008G04+ CAGTAAGCAGCCCATTTCTCTCT
JMFS104B10+ GCAGCCCATTTCTCTCT
JMFS029A10+ GAGCTCGGCGGCAGTAAGCAGCCCATTTCTCTCT
JMFS075G04+ GCACATTGATCCCCGCGAGCTCGGCGGCAGTAAGCAGCCCATTTCTCTCT
                      ____________________________________________________________
consensus GCACATTGATCCCCGCGAGCTCGGCGGCAGTAAGCAGCCCATTTCTCTCT
 
. : . : . : . : . : . :
JMFS127G07+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCCCCGCACG
JMFS008G04+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCCCCGCACG
JMFS104B10+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCNCCGCACG
JMFS029A10+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCNCCGCACG
JMFS075G04+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCCCCGCACG
                      ____________________________________________________________
consensus GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCCCCGCACG
 
. : . : . : . : . : . :
JMFS127G07+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS008G04+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS104B10+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS029A10+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS075G04+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS002C10+ GCCGTG
JMSF014C08+ GCCGTG
                      ____________________________________________________________
consensus TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
 
. : . : . : . : . : . :
JMFS127G07+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS008G04+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS104B10+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS029A10+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS075G04+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS002C10+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMSF014C08+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
                      ____________________________________________________________
consensus AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
 
. : . : . : . : . : . :
JMFS127G07+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS008G04+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS104B10+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS029A10+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS075G04+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS002C10+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMSF014C08+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
                      ____________________________________________________________
consensus TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
 
. : . : . : . : . : . :
JMFS127G07+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS008G04+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS104B10+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS029A10+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS075G04+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS002C10+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMSF014C08+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
                      ____________________________________________________________
consensus TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
 
. : . : . : . : . : . :
JMFS127G07+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS008G04+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS104B10+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS029A10+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS075G04+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS002C10+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMSF005C15+ CATC
JMSF014C08+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
                      ____________________________________________________________
consensus CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
 
. : . : . : . : . : . :
JMFS127G07+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS008G04+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS104B10+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS029A10+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS075G04+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS002C10+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMSF005C15+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMSF014C08+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
                      ____________________________________________________________
consensus TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
 
. : . : . : . : . : . :
JMFS127G07+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS008G04+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS104B10+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS029A10+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS075G04+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS002C10+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMSF005C15+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMSF014C08+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
                      ____________________________________________________________
consensus ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
 
. : . : . : . : . : . :
JMFS127G07+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS008G04+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS104B10+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS029A10+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS075G04+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS002C10+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMSF005C15+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMSF014C08+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
                      ____________________________________________________________
consensus AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
 
. : . : . : . : . : . :
JMFS127G07+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMFS008G04+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMFS104B10+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMFS029A10+ CCTCCGCAAATGAACGAGTC
JMFS075G04+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMFS002C10+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMSF005C15+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAACTGGGATGAAGGTC
JMSF014C08+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAACTGGGATGAAGGTCGGAGAACTC
                      ____________________________________________________________
consensus CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAACTGGGATGAAGGTCGGAGAACTC