clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS002C10 | Sequence | 463 | 013299 (8) | ref|XP_006357886.1| | 3e-66 | PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum] | |||||
JMFS008G04 | Sequence | 600 | 013299 (8) | ref|XP_006357886.1| | 9e-93 | PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum] | |||||
JMFS029A10 | Sequence | 594 | 013299 (8) | ref|XP_006357886.1| | 3e-94 | PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum] | |||||
JMFS075G04 | Sequence | 627 | 013299 (8) | ref|XP_006357886.1| | 6e-99 | PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum] | |||||
JMFS104B10 | Sequence | 594 | 013299 (8) | ref|XP_006357886.1| | 4e-91 | PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum] | |||||
JMFS127G07 | Sequence | 600 | 013299 (8) | ref|XP_006357886.1| | 9e-93 | PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum] | |||||
JMSF005C15 | Sequence | 236 | 013299 (8) | ref|XP_006357886.1| | 3e-19 | PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum] | |||||
JMSF014C08 | Sequence | 486 | 013299 (8) | ref|XP_006357886.1| | 4e-66 | PREDICTED: heat shock 70 kDa protein 17-like [Solanum tuberosum] | 781 | 002017 (2) | ref|XP_009757679.1| | 2e-62 | PREDICTED: heat shock 70 kDa protein 17 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS127G07+ CAGTAAGCAGCCCATTTCTCTCT
JMFS008G04+ CAGTAAGCAGCCCATTTCTCTCT
JMFS104B10+ GCAGCCCATTTCTCTCT
JMFS029A10+ GAGCTCGGCGGCAGTAAGCAGCCCATTTCTCTCT
JMFS075G04+ GCACATTGATCCCCGCGAGCTCGGCGGCAGTAAGCAGCCCATTTCTCTCT
____________________________________________________________
consensus GCACATTGATCCCCGCGAGCTCGGCGGCAGTAAGCAGCCCATTTCTCTCT
. : . : . : . : . : . :
JMFS127G07+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCCCCGCACG
JMFS008G04+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCCCCGCACG
JMFS104B10+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCNCCGCACG
JMFS029A10+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCNCCGCACG
JMFS075G04+ GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCCCCGCACG
____________________________________________________________
consensus GCGACGCCCATGAATGGAGGCACTGTTATTACTGCATCCTTCACTGAACCGCCCCGCACG
. : . : . : . : . : . :
JMFS127G07+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS008G04+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS104B10+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS029A10+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS075G04+ TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
JMFS002C10+ GCCGTG
JMSF014C08+ GCCGTG
____________________________________________________________
consensus TGCGTCTCCGCGAGCCCAATCGCGTACTTCAACACCATCGCCACCAGCTCCTCTGCCGTG
. : . : . : . : . : . :
JMFS127G07+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS008G04+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS104B10+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS029A10+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS075G04+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMFS002C10+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
JMSF014C08+ AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
____________________________________________________________
consensus AAATTCCCGTTCTCGGTACGGAAAGCCGCGACATTCCTCGTCTCCTCCGGAAAAACGTCG
. : . : . : . : . : . :
JMFS127G07+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS008G04+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS104B10+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS029A10+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS075G04+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMFS002C10+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
JMSF014C08+ TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
____________________________________________________________
consensus TGTTTTAAATACAGGGAGTCTAGGGATTTGACGACGTGATCGTAGGGTTTAGCGATGAGT
. : . : . : . : . : . :
JMFS127G07+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS008G04+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS104B10+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS029A10+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS075G04+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMFS002C10+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
JMSF014C08+ TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
____________________________________________________________
consensus TCTCGAAGATGGGAATAAACCTTGTCCGGATAGCGCGCGAGGAGGCCCGACGCCTCCTCG
. : . : . : . : . : . :
JMFS127G07+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS008G04+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS104B10+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS029A10+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS075G04+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMFS002C10+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
JMSF005C15+ CATC
JMSF014C08+ CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
____________________________________________________________
consensus CCGATTAGCCTCGCCCCGGAATGGAATGCGACTAACGACGGGCTTTTGCGCTTCGACATC
. : . : . : . : . : . :
JMFS127G07+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS008G04+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS104B10+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS029A10+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS075G04+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMFS002C10+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMSF005C15+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
JMSF014C08+ TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
____________________________________________________________
consensus TCATTGATGGCGATCGAGATTGGCGGTTGCCCCGGTTTCAGGTTGACCACGGCGACTTTC
. : . : . : . : . : . :
JMFS127G07+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS008G04+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS104B10+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS029A10+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS075G04+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMFS002C10+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMSF005C15+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
JMSF014C08+ ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
____________________________________________________________
consensus ATGGATTCAGATCCCAGATCTATGCTGGAAACAGCGGCATGACAGCAAATTGAGTTGAGC
. : . : . : . : . : . :
JMFS127G07+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS008G04+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS104B10+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS029A10+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS075G04+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMFS002C10+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMSF005C15+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
JMSF014C08+ AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
____________________________________________________________
consensus AAGAGCAGGGATAAAAATATCCCTATCCGGAAAAGCATTGTGTCCACCGTCGCCGGAACT
. : . : . : . : . : . :
JMFS127G07+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMFS008G04+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMFS104B10+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMFS029A10+ CCTCCGCAAATGAACGAGTC
JMFS075G04+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMFS002C10+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAA
JMSF005C15+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAACTGGGATGAAGGTC
JMSF014C08+ CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAACTGGGATGAAGGTCGGAGAACTC
____________________________________________________________
consensus CCTCCGCAAATGAACGAGTCCGTTACCGGAGATTAAACTGGGATGAAGGTCGGAGAACTC