Contig 013298:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150C05+                                                                     CT
                      ____________________________________________________________
consensus                                                                       CT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150C05+           CATCAATCTGAACTGAAAGTGCTTCAGGCTTCGTTTTTGCAATTTGTTGCATGTTGTAGG
                      ____________________________________________________________
consensus             CATCAATCTGAACTGAAAGTGCTTCAGGCTTCGTTTTTGCAATTTGTTGCATGTTGTAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150C05+           CCCTCTTTTTTTACGTTCAGTATTTAAAGTAGATGGATCGGTCATGATTATTGATAGATA
                      ____________________________________________________________
consensus             CCCTCTTTTTTTACGTTCAGTATTTAAAGTAGATGGATCGGTCATGATTATTGATAGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150C05+           CCTTCTTCACTGCAGCATCAGATATTTGTTTTCCATAGCCGAGTGTGAATGTAACNAGAT
                      ____________________________________________________________
consensus             CCTTCTTCACTGCAGCATCAGATATTTGTTTTCCATAGCCGAGTGTGAATGTAACNAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150C05+           ATCTTGGGTGGGTGATCAAGTCCTCAGTTTCCAGTCAAAATAGCAAGTCGAAGTTAACGG
JMSF014B02+                                         CCAGTCAAAATAGCAAGGCGAAGTTGACGG
                      ____________________________________________________________
consensus             ATCTTGGGTGGGTGATCAAGTCCTCAGTTTCCAGTCAAAATAGCAAGTCGAAGTTGACGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150C05+           GATCCTGAGAGACTCAACCGACTGC-AAAGCACAGGGTTGGATGTTTTTCCAACTTAGTC
JMSF014B02+           GATCCTGAGAGACTCAACCGACTGCGAAAGCACAGGGTTGGATGTTTTTCCAACTTAGTC
                      ____________________________________________________________
consensus             GATCCTGAGAGACTCAACCGACTGCGAAAGCACAGGGTTGGATGTTTTTCCAACTTAGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS150C05+           ATTTCTGATGATGAAAATGATCGGCATCAA                              
JMSF014B02+           ATTTCTGAAGATGAAAATGATTGGCATCAACTCCTTGACCGGGAGACTCGGTGGCCCCGC
                      ____________________________________________________________
consensus             ATTTCTGATGATGAAAATGATTGGCATCAACTCCTTGACCGGGAGACTCGGTGGCCCCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014B02+           TGCTTACGGTGAAAGAGAAGCAGAGACCGTAGTCGTTTCTAAACCCTAAACCTAATAAAA
                      ____________________________________________________________
consensus             TGCTTACGGTGAAAGAGAAGCAGAGACCGTAGTCGTTTCTAAACCCTAAACCTAATAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014B02+           TTAAAAATTAAAAATTAAAAATAAATAAATAAATGAAGATCAAACCTGTGATGGAGGCAG
                      ____________________________________________________________
consensus             TTAAAAATTAAAAATTAAAAATAAATAAATAAATGAAGATCAAACCTGTGATGGAGGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014B02+           TGACGGTGGCTGTGGTGGGCGGAGATAGTGACGGTGGCTGTGGTGGGCGGAGGCAGTGAC
                      ____________________________________________________________
consensus             TGACGGTGGCTGTGGTGGGCGGAGATAGTGACGGTGGCTGTGGTGGGCGGAGGCAGTGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014B02+           GGGCTGTGGAGATGGCTTTTGCGTCGGCAGTTGTGGGGGAGGAAAGGGCTTTCGGCGGCT
                      ____________________________________________________________
consensus             GGGCTGTGGAGATGGCTTTTGCGTCGGCAGTTGTGGGGGAGGAAAGGGCTTTCGGCGGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014B02+           ATGGCGGCATTCGTCGTTGAAGATGGGTGTGTGTTCGGCGTAAATGTGGGAGCGTCTTCT
                      ____________________________________________________________
consensus             ATGGCGGCATTCGTCGTTGAAGATGGGTGTGTGTTCGGCGTAAATGTGGGAGCGTCTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF014B02+           TCGACGGGGCAACGCTCAACAGTCAACACATTTGTTTAATTTTGTCGTTAGATTTGTTTC
                      ____________________________________________________________
consensus             TCGACGGGGCAACGCTCAACAGTCAACACATTTGTTTAATTTTGTCGTTAGATTTGTTTC