Contig 013297:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS167C11Sequence589013297 (2)
JMSF014A10Sequence191013297 (2)734018161gb|AFW84900.1|1e-42hypothetical protein ZEAMMB73_509431 [Zea mays]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS167C11+ CAACCTGTCATCTTGGA
                      ____________________________________________________________
consensus CAACCTGTCATCTTGGA
 
. : . : . : . : . : . :
JMFS167C11+ TATTAGATGCAGCACTGTAGAAGGCATTATCCTTGTCTGAACAGAATTGGCCATGGCCCT
                      ____________________________________________________________
consensus TATTAGATGCAGCACTGTAGAAGGCATTATCCTTGTCTGAACAGAATTGGCCATGGCCCT
 
. : . : . : . : . : . :
JMFS167C11+ CAATTGGTGGCAAGTCAGTCAGGCTCCCACTGCAACTATGCAACGGAGGGTCAAAGATTA
                      ____________________________________________________________
consensus CAATTGGTGGCAAGTCAGTCAGGCTCCCACTGCAACTATGCAACGGAGGGTCAAAGATTA
 
. : . : . : . : . : . :
JMFS167C11+ CTGCTCTCTCGTTTGAGTGAAGTGAACCATCCAAAACTCCACTCCTAGAATCATGTGGTG
                      ____________________________________________________________
consensus CTGCTCTCTCGTTTGAGTGAAGTGAACCATCCAAAACTCCACTCCTAGAATCATGTGGTG
 
. : . : . : . : . : . :
JMFS167C11+ CAAAACTCAGTGATGAATCTTCTGGCCTACTCTGCGAAGAATCGGATTCCGTATCCCCAA
                      ____________________________________________________________
consensus CAAAACTCAGTGATGAATCTTCTGGCCTACTCTGCGAAGAATCGGATTCCGTATCCCCAA
 
. : . : . : . : . : . :
JMFS167C11+ GCAAGTTCCAAAACATCTCCATGTCGACCATTTCAGCGGGAAATTCAACGACTTCAGTTC
                      ____________________________________________________________
consensus GCAAGTTCCAAAACATCTCCATGTCGACCATTTCAGCGGGAAATTCAACGACTTCAGTTC
 
. : . : . : . : . : . :
JMFS167C11+ CTTCGCCGCCGCCGCCTCCTCCTCCTGCGGCGGATTCCCGCAACTCCTCCGGCGACCAAA
                      ____________________________________________________________
consensus CTTCGCCGCCGCCGCCTCCTCCTCCTGCGGCGGATTCCCGCAACTCCTCCGGCGACCAAA
 
. : . : . : . : . : . :
JMFS167C11+ GGTTAGCAGTCCCATCCGCCATCATCATCGCAATATCAATCAATCAATCAATCATTCAGA
                      ____________________________________________________________
consensus GGTTAGCAGTCCCATCCGCCATCATCATCGCAATATCAATCAATCAATCAATCATTCAGA
 
. : . : . : . : . : . :
JMFS167C11+ GCAAAAAAAAAAAACAAAAACAAAAACAGGAAAAATCTAACTCCCAATTCTCTAAAGCAC
JMSF014A10+ CTCTAAAGCAC
                      ____________________________________________________________
consensus GCAAAAAAAAAAAACAAAAACAAAAACAGGAAAAATCTAACTCCCAATTCTCTAAAGCAC
 
. : . : . : . : . : . :
JMFS167C11+ GACTTGCGGTCAACCCCTACACAATCATCCGTCAATGTGAAACCAACTGCGAATCTAGAG
JMSF014A10+ GACTTGCGGTCAACCCCTACACAATCATCCGTCAATGTGAANCCAACTGCGAATCTAGAG
                      ____________________________________________________________
consensus GACTTGCGGTCAACCCCTACACAATCATCCGTCAATGTGAAACCAACTGCGAATCTAGAG
 
. : . : . : . : . : . :
JMFS167C11+ TTTCACTCTGGTTTTGGTAAAGAACGATGAAA
JMSF014A10+ TTTCACTCNGGTTTTGGTAAAGAACGATGAAACGGTCAATATGTGCGTGCTTACGGATGT
                      ____________________________________________________________
consensus TTTCACTCTGGTTTTGGTAAAGAACGATGAAACGGTCAATATGTGCGTGCTTACGGATGT
 
. : . : . : . : . : . :
JMSF014A10+ ACTGGTAAAAAGAACTGAGAAAAGAGAAGAAGGGTATCCATTGAATTTTGAGGGGTNGTA
                      ____________________________________________________________
consensus ACTGGTAAAAAGAACTGAGAAAAGAGAAGAAGGGTATCCATTGAATTTTGAGGGGTNGTA