clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS005E04 | Sequence | 572 | 013296 (6) | ref|XP_009801018.1| | 9e-52 | PREDICTED: putative uncharacterized protein FLJ22184 [Nicotiana sylvestris] ref | |||||
JMFS050E03 | Sequence | 612 | 013296 (6) | ref|XP_004228602.1| | 2e-89 | PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref | |||||
JMFS101F07 | Sequence | 623 | 013296 (6) | ref|XP_004228602.1| | 1e-58 | PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref | |||||
JMSF008D07 | Sequence | 284 | 013296 (6) | 773 | 013919 (4) | ref|XP_004228602.1| | 4e-06 | PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref | |||
JMSF013P06 | Sequence | 439 | 013296 (6) | ref|XP_004228602.1| | 1e-27 | PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref | 705 | 013919 (4) | ref|XP_004228602.1| | 2e-06 | PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref |
JMSF018A18 | Sequence | 233 | 013296 (6) | 774 | 013919 (4) | ref|XP_004228602.1| | 5e-06 | PREDICTED: putative uncharacterized protein FLJ22184 [Solanum lycopersicum] ref |
This contig is upended
. : . : . : . : . : . :
JMFS050E03+ GGTAACTTCGACCTTNTGTCCTGTATCTGCTTTAATACCATAAACTTTTACTTTAGCTCC
____________________________________________________________
consensus GGTAACTTCGACCTTNTGTCCTGTATCTGCTTTAATACCATAAACTTTTACTTTAGCTCC
. : . : . : . : . : . :
JMFS050E03+ AGTTTCCTTTTCCAGTCGTTTATGAGTGTCACTCACATGTCCAAAGATCAAGCCAATGAA
____________________________________________________________
consensus AGTTTCCTTTTCCAGTCGTTTATGAGTGTCACTCACATGTCCAAAGATCAAGCCAATGAA
. : . : . : . : . : . :
JMFS050E03+ ATTGTACCCAGGATGCTCTTTGATAGGGATAGGAACTTTTCCTTCTTTCTGGATAGGTTT
JMFS005E04+ AGGATGCTCTTTGATAGGGATAGGAACTTTTCCTTCTTTCTGGATAGGTTT
JMFS101F07+ CTGGATAGGTTT
____________________________________________________________
consensus ATTGTACCCAGGATGCTCTTTGATAGGGATAGGAACTTTTCCTTCTTTCTGGATAGGTTT
. : . : . : . : . : . :
JMFS050E03+ GTAGCCAGCAGGTGGCTTATAGTTAGGATTTAGTTTTAGAACTTCACCAATGGCTTCTCG
JMFS005E04+ GTAGCCAGCAGGTGGCTTATAGTTAGGATTTAGTTTTAGAACTTCACCAATGGCTTCTCG
JMFS101F07+ GTAGCCAGCAGGTGGCTTATAGTTAGGATTTAGTTTTAGAACTTCACCAATGGCTTCTCG
____________________________________________________________
consensus GTAGCCAGCAGGTGGCTTATAGTTAGGATTTAGTTTTAGAACTTCACCAATGGCTTCTCG
. : . : . : . : . : . :
JMFS050E03+ CTTTTCAAGTTCCAATGATTTTATTTTCTCAGCATCAAGTTTATAATCCAGAATACTAGA
JMFS005E04+ CTTTTCAAGTTCCAATGATTTTATTTTCTCAGCATCAAGTTTATAATCCAGAATACTAGA
JMFS101F07+ CTTTTCAAGTTCCAATGATTTTATTTTCTCAGCATCAAGTTTATAATCCAGAATACTAGA
____________________________________________________________
consensus CTTTTCAAGTTCCAATGATTTTATTTTCTCAGCATCAAGTTTATAATCCAGAATACTAGA
. : . : . : . : . : . :
JMFS050E03+ GGCTGTTAATCTGTCTTGGTTCTCTTCCCAGTCCATAGGTCCTGAACTCAGCTGTTGTGC
JMFS005E04+ GGCTGTTAATCTGTCTTGGTTCTCTTCCCAGTCCATAGGTCCTGAACTCAGCTGTTGTGC
JMFS101F07+ GGCTGTTAATGTGTCTTGGTTCTCTTCCCAGTCCATAGGTCCTGAACTCAGCTGTTGTGC
____________________________________________________________
consensus GGCTGTTAATCTGTCTTGGTTCTCTTCCCAGTCCATAGGTCCTGAACTCAGCTGTTGTGC
. : . : . : . : . : . :
JMFS050E03+ TATTTGATCAACACGAGTCTGATATGCTAAGGCTCTTCCTTTCCTAACAGTTGTATCTTG
JMFS005E04+ TATTTGATCAACACGAGTCTGATATGCTAAGGCTCTTCCTTTCCTAACAGTTGTATCTTG
JMFS101F07+ TATTTGATCAACACGAGTCTGATATGCTAAGGCTCTTCCTTTCCTAACAGTTGTATCTTG
JMSF013P06+ TCCTAACAGTTGTATCTTG
____________________________________________________________
consensus TATTTGATCAACACGAGTCTGATATGCTAAGGCTCTTCCTTTCCTAACAGTTGTATCTTG
. : . : . : . : . : . :
JMFS050E03+ TGTCAGATCAGGGCCCCACTTAGTTTTCCTCCGCACCAGTTTAGTGCTTTCTTCATTTAC
JMFS005E04+ TGTCAGATCAGGGCCCCACTTAGTTTTCCTCCGCACCAGTTTAGTGCTTTCTTCATTTAC
JMFS101F07+ TGTCAGATCAGGGCCCCACTTAGTTTTCCTCCGCACCAGTTTAGTGCTTTCTTCATTTAC
JMSF013P06+ TGTCAGATCAGGGCCCCACTTAGTTTTCCTCCGCACCAGTTTAGTGCTTTCTTCATTTAC
____________________________________________________________
consensus TGTCAGATCAGGGCCCCACTTAGTTTTCCTCCGCACCAGTTTAGTGCTTTCTTCATTTAC
. : . : . : . : . : . :
JMFS050E03+ TGACTCACTACCCTCCTTTTTACCTCCTCGAAGGACAGGAACCATAGAACCTGACAACTT
JMFS005E04+ TGACTCACTACCCTCC-TTTTACCTCCTCGAAGGACAGGAACCATAGAACCTGACAACTT
JMFS101F07+ TGACTCACTACCCTCCTTTTTACCTCCTCGAAGGACAGGAACCATAGAACCTGACAACTT
JMSF013P06+ TGACTCACTACCCTCCTTTTTACCTCCTCGAAGGACAGGAACCATAGAACCTGACAACTT
____________________________________________________________
consensus TGACTCACTACCCTCCTTTTTACCTCCTCGAAGGACAGGAACCATAGAACCTGACAACTT
. : . : . : . : . : . :
JMFS050E03+ GTTCTTTGGTATCACAAACCCAGATTTGTTGGCAAAGATGGAGATCTTTGCAGCACTTGT
JMFS005E04+ GTTCTTTGGTATCACAAACCCAGATTTGTTGGCAAAGATGGAGATCTTTGCAGCACTTGT
JMFS101F07+ GTTCTTTGGTATCACAAACCCAGATTTGTTGGCAAAGATGGAGATCTTTGCAGCACTTGT
JMSF008D07+ AAACCCAGATTTGTTGGCAAAGATGGAGATCTTTGCAGCACTTGT
JMSF013P06+ GTTCTTTGGTATCACAAACCCAGATTTGTTGGCAAAGATGGAGATCTTTGCAGCACTTGT
____________________________________________________________
consensus GTTCTTTGGTATCACAAACCCAGATTTGTTGGCAAAGATGGAGATCTTTGCAGCACTTGT
. : . : . : . : . : . :
JMFS050E03+ TGTTGGAGCCAT
JMFS005E04+ TGTTGGAGCCATTGTAGTGCTCTGCATATTGTGAGATGCTTCCCCAATTTTTATGCTCAT
JMFS101F07+ TGTTGGAGCCATTGTAGTGCTCTGCATATTGTGAGATGCTTCCCCAATTTTTATGCTCAT
JMSF018A18+ AGCCATTGTAGTGCTCTGCATATTGTGAGATGCTTCCCCAATTTTTATGCTCAT
JMSF008D07+ TGTNGGAGCCATTGTAGTGCTCTGCATATTGTGAGATGCTTCCCCAATTTTTATGCTCAT
JMSF013P06+ TGTTGGAGCCATTGTAGTGCTCTGCATATTGTGAGATGCTTCCCCAATTTTTATGCTCAT
____________________________________________________________
consensus TGTTGGAGCCATTGTAGTGCTCTGCATATTGTGAGATGCTTCCCCAATTTTTATGCTCAT
. : . : . : . : . : . :
JMFS005E04+ CTCAACCTTCAAGTAAACTCCACCACTTGCTAAAAAATATGA
JMFS101F07+ CTCAACCTTCAAGTAAACTCCACCACTTGCTAAAAAATATGAAATCCTGTATGGAAAAAG
JMSF018A18+ CTCAACCTTCAAGTAAACTCCACCACTTGCTAAAAAATATGAAATCCTGTATGGAAAAAG
JMSF008D07+ CTCAACCTTCAAGTAAACTCCACCACTTGCTAAAAAATATGAAATCCTGTATGGAAAAAG
JMSF013P06+ CTCAACCTTCAAGTAAACTCCACCACTTGCTAAAAAATATGAAATCCTGTATGGAAAAAG
____________________________________________________________
consensus CTCAACCTTCAAGTAAACTCCACCACTTGCTAAAAAATATGAAATCCTGTATGGAAAAAG
. : . : . : . : . : . :
JMFS101F07+ TTGAGCAGTGTCTGTGTTTTACATTAACTGAATTTTTGGAATGGGGGAGGAATTGGCGAG
JMSF018A18+ TTGAGCAGTGTCTGTGTTTTACATTAACTGAATTTTTGGAATGGGGGAGGAATTGGCGAG
JMSF008D07+ TTGAGCAGTGTCTGTGTTTTACATTAACTGAATTTTTGGAATGGGGGAGGAATTGGCGAG
JMSF013P06+ TTGAGCAGTGTCTGTGTTTTACATTAACTGAATTTTTGGAATGGGGGAGGAATTGGCGAG
____________________________________________________________
consensus TTGAGCAGTGTCTGTGTTTTACATTAACTGAATTTTTGGAATGGGGGAGGAATTGGCGAG
. : . : . : . : . : . :
JMFS101F07+ AGCGCTTTGAG
JMSF018A18+ AGCGCTTTGAGGGATCCGGAGCCCGGAGAAGAAGAAATGAGGGGGGTACTACTCGCCCC
JMSF008D07+ AGCGCTTTGAGGGATCCGGAGCCCGGAGAAGAAGAAATGAGGGGGGTACTACTCGCCCC
JMSF013P06+ AGCGCTTTGAGGGATCCGGAGCCCGGAGAAGAAGAAATGAGGGGGGTACTACTCGCCCCC
____________________________________________________________
consensus AGCGCTTTGAGGGATCCGGAGCCCGGAGAAGAAGAAATGAGGGGGGTACTACTCGCCCCC