Contig 013295:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013M03Sequence483013295 (2)761001311 (3)ref|XP_011088476.1|6e-88PREDICTED: MATE efflux family protein 4, chloroplastic [Sesamum indicum]
JMSF049K10Sequence692013295 (2)ref|XP_009592832.1|2e-57PREDICTED: MATE efflux family protein 4, chloroplastic-like [Nicotiana tomentos800001311 (3)ref|XP_011088476.1|2e-105PREDICTED: MATE efflux family protein 4, chloroplastic [Sesamum indicum]

Alignment

This contig is upended


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JMSF049K10+                                                AAAAAGCAAAGTGGATATTTGGT
                      ____________________________________________________________
consensus                                                  AAAAAGCAAAGTGGATATTTGGT
 
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JMSF049K10+           GTTGNACTTCACTTTTATCCTGTCTAGCTAGCGCAGTAGCAACCAAATTTGAAGTAGCAA
                      ____________________________________________________________
consensus             GTTGNACTTCACTTTTATCCTGTCTAGCTAGCGCAGTAGCAACCAAATTTGAAGTAGCAA
 
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JMSF049K10+           TAGAAAGAAACATAAAAAGATAACTTGTATTATCGCAAAACACTGTCCCTGGTCCTAATG
                      ____________________________________________________________
consensus             TAGAAAGAAACATAAAAAGATAACTTGTATTATCGCAAAACACTGTCCCTGGTCCTAATG
 
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JMSF049K10+           CGGCTAGTTCAATGGAGCTTCCTTGGCCAATGACGGCAGTGTCAATGAGGCTCATCAATG
                      ____________________________________________________________
consensus             CGGCTAGTTCAATGGAGCTTCCTTGGCCAATGACGGCAGTGTCAATGAGGCTCATCAATG
 
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JMSF049K10+           GCCCGCACAACCACAGCCCAACGGCCGGACCAGAAAACTTCACAATCTCCACAATTTGGC
JMSF013M03+                                                                    GGC
                      ____________________________________________________________
consensus             GCCCGCACAACCACAGCCCAACGGCCGGACCAGAAAACTTCACAATCTCCACAATTTGGC
 
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JMSF049K10+           TCCAAATACTCTCATCCGCTGAAAATTCTTGTATATCACTCTTAGACTCTATACTTTTGA
JMSF013M03+           TCCAAATACTCTCATCCGCTGAAAATTCTTGTATATCACTCTTAGACTCTATACTTTTGA
                      ____________________________________________________________
consensus             TCCAAATACTCTCATCCGCTGAAAATTCTTGTATATCACTCTTAGACTCTATACTTTTGA
 
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JMSF049K10+           GTGTTTCTCCATTCTGCATTCCTTTTTCTGCTTCCTCTTCTCCCATTGACGAAACCGAGA
JMSF013M03+           GTGTTTCTCCATTCTGCATTCCTTTTTCTGCTTCCTCTTCTCCCATTGACGAAACCGAGA
                      ____________________________________________________________
consensus             GTGTTTCTCCATTCTGCATTCCTTTTTCTGCTTCCTCTTCTCCCATTGACGAAACCGAGA
 
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JMSF049K10+           CTGTGCTTTGACTGCTTTCTACACTCTGCGTTGACTTCTCGTCTTCATGAAGTATATCAC
JMSF013M03+           CTGTGCTTTGACTGCTTTCTACACTCTGCGTTGACTTCTCGTCTTCATGAAGTATATCAC
                      ____________________________________________________________
consensus             CTGTGCTTTGACTGCTTTCTACACTCTGCGTTGACTTCTCGTCTTCATGAAGTATATCAC
 
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JMSF049K10+           GACTGTGACTGATGCAAGCGGTGATAAGTCGGGTTTGGCGAGCACGGAATCGAGTCGGTA
JMSF013M03+           GACTGTGACTGATGCAAGCGGTGATAAGTCGGGTTTGGCGAGCACGGAATCGAGTCGGTA
                      ____________________________________________________________
consensus             GACTGTGACTGATGCAAGCGGTGATAAGTCGGGTTTGGCGAGCACGGAATCGAGTCGGTA
 
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JMSF049K10+           AACGGGTGGGAGAACCGCCGAAACAATTCAAATGGCAGTCGATGAGGACGCTTCGTTTCA
JMSF013M03+           AACGGGTGGGAGAACCGCCGAAACAATTCAAATGGCAGTCGATGAGGACGCTTCGTTTCA
                      ____________________________________________________________
consensus             AACGGGTGGGAGAACCGCCGAAACAATTCAAATGGCAGTCGATGAGGACGCTTCGTTTCA
 
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JMSF049K10+           ATCTGGGGATTCGGTTTTGTACTGGAAACGAGCTGTGGTATGTTCGAGCTCCGAGATACA
JMSF013M03+           ATCTGGGGATTCGGTTTTGTACTGGAAACGAGCTGTGGTATGTTCGAGCTCCGAGATACA
                      ____________________________________________________________
consensus             ATCTGGGGATTCGGTTTTGTACTGGAAACGAGCTGTGGTATGTTCGAGCTCCGAGATACA
 
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JMSF049K10+           TCTTGGCTCACAGAGCGGCGGCGGATAGCAGCGCCGCCGGAGCAAAAAGTGTACTTTGTG
JMSF013M03+           TCTTGGCTCACAGAGCGGCGGCGGATAGCAGCGCCGCCGGAGCAAAAAGTGTACTTTGTG
                      ____________________________________________________________
consensus             TCTTGGCTCACAGAGCGGCGGCGGATAGCAGCGCCGCCGGAGCAAAAAGTGTACTTTGTG
 
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JMSF049K10+           AATGTGAT                                                    
JMSF013M03+           AATGTGATGACGGGATATACTATTCGCACCAAGATATCGTACTTGAATTTCGCGGCTTTC
                      ____________________________________________________________
consensus             AATGTGATGACGGGATATACTATTCGCACCAAGATATCGTACTTGAATTTCGCGGCTTTC