Contig 013294:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS086E09Sequence635013294 (3)
JMSF009C10Sequence308013294 (3)761005615 (2)
JMSF013F17Sequence473013294 (3)687005615 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS086E09+ TTCATAATTATTGAACTCTATGTTCATAATATAAAACTCTATGTTCATAATTT
                      ____________________________________________________________
consensus TTCATAATTATTGAACTCTATGTTCATAATATAAAACTCTATGTTCATAATTT
 
. : . : . : . : . : . :
JMFS086E09+ NTGAACTTCATATTCACAATTATTGAACTCTATATTCACAATTACAGAACTCTATTATTA
                      ____________________________________________________________
consensus NTGAACTTCATATTCACAATTATTGAACTCTATATTCACAATTACAGAACTCTATTATTA
 
. : . : . : . : . : . :
JMFS086E09+ TAATTATAGAACTCTATTTTCATAATTTTTAAACTCCATATTCACAATTATGAACAGTTT
                      ____________________________________________________________
consensus TAATTATAGAACTCTATTTTCATAATTTTTAAACTCCATATTCACAATTATGAACAGTTT
 
. : . : . : . : . : . :
JMFS086E09+ TGGAACCGTGTCAGAGGTTCCAGATAGACACGGTTCCACAGCATAATTTGCCCCTTGGAT
                      ____________________________________________________________
consensus TGGAACCGTGTCAGAGGTTCCAGATAGACACGGTTCCACAGCATAATTTGCCCCTTGGAT
 
. : . : . : . : . : . :
JMFS086E09+ TATTAGGGGTAACACTTGAGACCTGGGTCGGATCTTTGGTTAGTGGATCCGGTCTTTGGT
                      ____________________________________________________________
consensus TATTAGGGGTAACACTTGAGACCTGGGTCGGATCTTTGGTTAGTGGATCCGGTCTTTGGT
 
. : . : . : . : . : . :
JMFS086E09+ TAATGAATCGGCATTATTAATTAAAGATCCGACCCATCTTACAGATTTAGATTCGTGAGA
JMSF013F17+ TCGGCATTATTAATTAAAGATCCGACCCATCTTACAGATTTAGATTCGTGAGA
                      ____________________________________________________________
consensus TAATGAATCGGCATTATTAATTAAAGATCCGACCCATCTTACAGATTTAGATTCGTGAGA
 
. : . : . : . : . : . :
JMFS086E09+ TGGTCTCACACAAGTTTTTGTAGATTATTAAATTTAACCAATACAATCTAGTGAACGCAC
JMSF013F17+ TGGTCTCACACAAGTTTTTGTAGATTATTAAATTTAACCAATACAATCTAGTGAACGCAC
                      ____________________________________________________________
consensus TGGTCTCACACAAGTTTTTGTAGATTATTAAATTTAACCAATACAATCTAGTGAACGCAC
 
. : . : . : . : . : . :
JMFS086E09+ AATCAAAAAGAGATAAACATTTCGGAGTATAAAAAGGTAAAGGAATTGAGTGATGTTGGA
JMSF013F17+ AATCAAAAAGAGATAAACATTTCGGAGTATAAAAAGGTAAAGGAATTGAGTGATGTTGGA
                      ____________________________________________________________
consensus AATCAAAAAGAGATAAACATTTCGGAGTATAAAAAGGTAAAGGAATTGAGTGATGTTGGA
 
. : . : . : . : . : . :
JMFS086E09+ GAAGTAGGAAACATACCTTAAATTAGGTTGGTGAAGATGGATCGGAAATGGAGTTAGTGA
JMSF009C10+ ATGGAGTTAGTGA
JMSF013F17+ GAAGTAGGAAACATACCTTAAATTAGGTTGGTGAAGATGGATCGGAAATGGAGTTAGTGA
                      ____________________________________________________________
consensus GAAGTAGGAAACATACCTTAAATTAGGTTGGTGAAGATGGATCGGAAATGGAGTTAGTGA
 
. : . : . : . : . : . :
JMFS086E09+ ATTGGGTTTGGGTAATATCAGATGAGAGATTGAAGGTCTGAGTTAGTTGTACTGTTGAAA
JMSF009C10+ ATTGGGTTTGGGTAATATCAGATGAGAGATTGAAGGTCTGAGTTAGTTGTACTGTTGAAA
JMSF013F17+ ATTGGGTTTGGGTAATATCAGATGAGAGATTGAAGGTCTGAGTTAGTTGTACTGTTGAAA
                      ____________________________________________________________
consensus ATTGGGTTTGGGTAATATCAGATGAGAGATTGAAGGTCTGAGTTAGTTGTACTGTTGAAA
 
. : . : . : . : . : . :
JMFS086E09+ TTATGAAGTAGAGTAGATTAGAGTCTCTGAATTGAAACTCAG
JMSF009C10+ TTATGAAGTAGAGTAGATTAGAGTCTCTGAATTGAAACTCAGATCAGATGAGAGTTATTG
JMSF013F17+ TTATGAAGTAGAGTAGATTAGAGTCTCTGAATTGAAACTCAGATCAGATGAGAGTTATTG
                      ____________________________________________________________
consensus TTATGAAGTAGAGTAGATTAGAGTCTCTGAATTGAAACTCAGATCAGATGAGAGTTATTG
 
. : . : . : . : . : . :
JMSF009C10+ AAATGAGTATACTGGTATAGCAGAGATGGGATAAGATCTGGTGAATGAATTATTGATGGG
JMSF013F17+ AAATGAGTATACTGGTATAGCAGAGATGGGATAAGATCTGGTGAATGAATTATTGATGGG
                      ____________________________________________________________
consensus AAATGAGTATACTGGTATAGCAGAGATGGGATAAGATCTGGTGAATGAATTATTGATGGG
 
. : . : . : . : . : . :
JMSF009C10+ ATATTGGGATGAGTAATTCTATACTTCC
JMSF013F17+ ATATTGGGATGAGTAATTCTATACTTCCTATGATTTGGTATGAATACATGTGAATATACC
                      ____________________________________________________________
consensus ATATTGGGATGAGTAATTCTATACTTCCTATGATTTGGTATGAATACATGTGAATATACC