Contig 013293:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF043F12+                                                             CAGCAAGGTG
                      ____________________________________________________________
consensus                                                               CAGCAAGGTG
 
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JMFF043F12+           CAATGGAGTCATCCCATTATTTGCTCTGGCTTCAACAAGAGCACCATGAGAGAGAAGTAA
                      ____________________________________________________________
consensus             CAATGGAGTCATCCCATTATTTGCTCTGGCTTCAACAAGAGCACCATGAGAGAGAAGTAA
 
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JMFF043F12+           CTTTGCAGCTTCATTACATCCATTCTTAGCAGCCATATGCAATGGGGTCTCCCCATACAT
                      ____________________________________________________________
consensus             CTTTGCAGCTTCATTACATCCATTCTTAGCAGCCATATGCAATGGGGTCTCCCCATACAT
 
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JMSF001H06+                                                      AGCAATAGTTTAACAAT
JMFF043F12+           GTTCTTTGCTTCCAACTCCACCTTTTCTGGGCCTTGGAAACCAAGCAATAGTTTAACAAT
                      ____________________________________________________________
consensus             GTTCTTTGCTTCCAACTCCACCTTTTCTGGGCCTTGGAAACCAAGCAATAGTTTAACAAT
 
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JMSF001H06+           CTCAATATTATTGTAACCAGCAGAAACATGAAGTGGTGTCTGTGCCATAACGGGGTTACG
JMFF043F12+           CTCAATATTATTGTAACCAGCAGAAACATGAAGTGGTGTCTGTGCCATAACGGGGTTACG
                      ____________________________________________________________
consensus             CTCAATATTATTGTAACCAGCAGAAACATGAAGTGGTGTCTGTGCCATAACGGGGTTACG
 
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JMSF001H06+           TTCATTGAGGAGAGAAGGGTTGTCATTAAGCATCTTGTGGAAGGCATTGAGATCCCCAGA
JMFF043F12+           TTCATTGAGGAGAGAAGGGTTGTCATTAAGCATCTTGTGGAAGGCATTGAGATCCCCAGA
                      ____________________________________________________________
consensus             TTCATTGAGGAGAGAAGGGTTGTCATTAAGCATCTTGTGGAAGGCATTGAGATCCCCAGA
 
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JMSF001H06+           TTGAGCAAACCCATGGATTGTCGTGGGTCTGGAAGACTTTGACCTCTGATCCCTAACCTT
JMFF043F12+           TTGAGCAAACCCATGGATTGTCGTGGGTCTGGAAGACTTTGACCTCTGATCCCTAACCTT
                      ____________________________________________________________
consensus             TTGAGCAAACCCATGGATTGTCGTGGGTCTGGAAGACTTTGACCTCTGATCCCTAACCTT
 
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JMSF001H06+           ATGCATTATTTTCCTTGTTTCCTATTAGCGTCTTCTCCCCCAATGAAAAATCAACAAAAG
JMFF043F12+           ATGCATTATTTTCCTTGTTTCCTATTAGCGTCTTCTCCCCCAATGAAAAATCAACAAAAG
                      ____________________________________________________________
consensus             ATGCATTATTTTCCTTGTTTCCTATTAGCGTCTTCTCCCCCAATGAAAAATCAACAAAAG
 
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JMSF001H06+           CAAGAATGGAGGCCTTGCCGACAGAGGTTTAAGCGGCGTTTCTGGGGGAAGGGTGGCCGG
JMFF043F12+           CAAGAATGGAGGCCTTGCCGACAGAGGTTTAAGCGGCGTTTCTGGGGGAAGGGTGGCCGG
                      ____________________________________________________________
consensus             CAAGAATGGAGGCCTTGCCGACAGAGGTTTAAGCGGCGTTTCTGGGGGAAGGGTGGCCGG
 
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JMSF001H06+           ACGGTGGAATTGGGGGTTGTCAGTTGTCAGAGGAATTTCGTCAAACAAGTCATGGGTGGT
JMFF043F12+           ACGGTGGAATTGGGGGTTGTCAGTTGTCAGAGGAATTTCGTCAAACAAGTCATGGGTGGT
                      ____________________________________________________________
consensus             ACGGTGGAATTGGGGGTTGTCAGTTGTCAGAGGAATTTCGTCAAACAAGTCATGGGTGGT
 
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JMSF001H06+           CAGG                                                        
JMFF043F12+           CAGGCGAGTGTGGAAATGAAATGAAAAGAAAATAAAAGAAATGGAAGAAAGGAGAAAAAA
JMSF013D22+                    GTGGAAATGAAATGAAAAGAAAATNAAAGAAATGGNAGAAAGGGGAAAAAA
                      ____________________________________________________________
consensus             CAGGCGAGTGTGGAAATGAAATGAAAAGAAAATAAAAGAAATGGAAGAAAGGGGAAAAAA
 
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JMFF043F12+           AAAAAGGGAAATTTCTTCGGTTGCCTGGCCTTG                           
JMSF013D22+           AAAAAGGGAAATTTCTTCGGTTGCCTGGCCTTGGCTGGCTGCCAATTGCTTGCCAGCTTG
                      ____________________________________________________________
consensus             AAAAAGGGAAATTTCTTCGGTTGCCTGGCCTTGGCTGGCTGCCAATTGCTTGCCAGCTTG