Contig 013289:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012O06Sequence497013289 (3)742024495ref|XP_009782011.1|7e-70PREDICTED: zinc finger CCCH domain-containing protein 37 isoform X1 [Nicotiana
JMSF012P05Sequence203013289 (3)
JMSF049B15Sequence672013289 (3)ref|XP_009782012.1|1e-95PREDICTED: zinc finger CCCH domain-containing protein 37 isoform X2 [Nicotiana 779024687gb|KDP37468.1|7e-83hypothetical protein JCGZ_06908 [Jatropha curcas]

Alignment

This contig is upended


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JMSF049B15+                                                              AAACGCACA
                      ____________________________________________________________
consensus                                                                AAACGCACA
 
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JMSF049B15+           TAGAGGTTCCGAAGGCCTTTCAGGTAAGACAAGAACATCAGTATTTTCAAAGGCATCCTT
                      ____________________________________________________________
consensus             TAGAGGTTCCGAAGGCCTTTCAGGTAAGACAAGAACATCAGTATTTTCAAAGGCATCCTT
 
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JMSF049B15+           ATCTTTTGGGTGGTTAAATTTGCACCTAATGCCATACTTGCACTTTTGAGTCTTTAGATA
                      ____________________________________________________________
consensus             ATCTTTTGGGTGGTTAAATTTGCACCTAATGCCATACTTGCACTTTTGAGTCTTTAGATA
 
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JMSF049B15+           ATACGGACAATCTGGCTCTCCTGGTCTCTCTGGAAGAGATTCACTTGTAATGGCTACCTC
                      ____________________________________________________________
consensus             ATACGGACAATCTGGCTCTCCTGGTCTCTCTGGAAGAGATTCACTTGTAATGGCTACCTC
 
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JMSF049B15+           TTTCCAATCTGGGATTCCACCCTCTGGAACCCAAATAGGATGGTCAAACTTGCAGCTATC
                      ____________________________________________________________
consensus             TTTCCAATCTGGGATTCCACCCTCTGGAACCCAAATAGGATGGTCAAACTTGCAGCTATC
 
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JMSF049B15+           TCCAAACTTACAGATTCTTGTGAGCATGTAATGGGCACAGTCCTTCTCTCCAGGCCTCTG
                      ____________________________________________________________
consensus             TCCAAACTTACAGATTCTTGTGAGCATGTAATGGGCACAGTCCTTCTCTCCAGGCCTCTG
 
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JMSF049B15+           GGGATAGATGGGCAAATTGCATGCAGTCTCAAATCTAGGACGCTTGGCTAAAGGATTGCT
                      ____________________________________________________________
consensus             GGGATAGATGGGCAAATTGCATGCAGTCTCAAATCTAGGACGCTTGGCTAAAGGATTGCT
 
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JMSF049B15+           TGAAAACCAAGATTCAGTTTGCCCAACTGTACTATGACCACCCAAAACTGTCTGATGATA
                      ____________________________________________________________
consensus             TGAAAACCAAGATTCAGTTTGCCCAACTGTACTATGACCACCCAAAACTGTCTGATGATA
 
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JMSF049B15+           TAGGGCTTCAGACGAGGGACGCTTCAACCCGGAAAGAAATGGGTCAGCAACAGCCGGTCC
                      ____________________________________________________________
consensus             TAGGGCTTCAGACGAGGGACGCTTCAACCCGGAAAGAAATGGGTCAGCAACAGCCGGTCC
 
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JMSF049B15+           AATATCAACACCAGGAGGACCAGACCATGATGATTGAGGGGCTGTAGGAATTCTACTGCC
JMSF012P05+                                                                   TGCC
JMSF012O06+                                           ATTGAGGGGCTGTAGGAATTCTACTGCC
                      ____________________________________________________________
consensus             AATATCAACACCAGGAGGACCAGACCATGATGATTGAGGGGCTGTAGGAATTCTACTGCC
 
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JMSF049B15+           AGCAGAGGCGAAACTATTATTAGCATAATTAAAGAGCATGGCTAGTAAGTGATGAGTACG
JMSF012P05+           AGCAGAGGCGAAANTATTATTAGCATAATTAAAGAGCATGGCTAGTAAGTGATGAGTACG
JMSF012O06+           AGCAGAGGCGAAACTATTATTAGCATAATTAAAGAGCATGGCTAGTAAGTGATGAGTACG
                      ____________________________________________________________
consensus             AGCAGAGGCGAAACTATTATTAGCATAATTAAAGAGCATGGCTAGTAAGTGATGAGTACG
 
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JMSF049B15+           AGAGGACTTGTAGCCGGAGAGCGGT                                   
JMSF012P05+           AGAGGACTTGTAGCCGGAGAGCGGTGCTGTGGTGGGTTGCACGAAGATAATAGCCAAACA
JMSF012O06+           AGAGGACTTGTAGCCGGAGAGCGGTGCTGTGGTGGGTTGCACGAAGATAATAGCCAAACA
                      ____________________________________________________________
consensus             AGAGGACTTGTAGCCGGAGAGCGGTGCTGTGGTGGGTTGCACGAAGATAATAGCCAAACA
 
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JMSF012P05+           ATGACAAAGTCAAGTTTTCAGCCGGTCTTACACATACGAAGGCTGTTCTTTTCAGATCCA
JMSF012O06+           ATGACAAAGTCAAGTTTTCAGCCGGTCTTACACATACGAAGGCTGTTCTTTTCAGATCCA
                      ____________________________________________________________
consensus             ATGACAAAGTCAAGTTTTCAGCCGGTCTTACACATACGAAGGCTGTTCTTTTCAGATCCA
 
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JMSF012P05+           CNGTAGGCGCATTGATGTG                                         
JMSF012O06+           CCGTAGGCGCATTGATGTGGAGACCTTTTGGTTAGAATCCGGAATAAAAGATGTTAACGG
                      ____________________________________________________________
consensus             CCGTAGGCGCATTGATGTGGAGACCTTTTGGTTAGAATCCGGAATAAAAGATGTTAACGG
 
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JMSF012O06+           CTATGTAGGGAGCTGAAGATGAGTGGAGGAAGCAAAATCGCCAGTTCAAGTCCTGGCAGT
                      ____________________________________________________________
consensus             CTATGTAGGGAGCTGAAGATGAGTGGAGGAAGCAAAATCGCCAGTTCAAGTCCTGGCAGT
 
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JMSF012O06+           GGGGCACCGAGTGACCGGCGTCCGGCGCAGTCAGCTTCGGCGTGGCAGTCGTGGACGATT
                      ____________________________________________________________
consensus             GGGGCACCGAGTGACCGGCGTCCGGCGCAGTCAGCTTCGGCGTGGCAGTCGTGGACGATT
 
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JMSF012O06+           GCCGATTGGGGCAGCAGCGGACCGGCGGTTTAAAATTGAAGTGTTGAACAATGAACCCCC
                      ____________________________________________________________
consensus             GCCGATTGGGGCAGCAGCGGACCGGCGGTTTAAAATTGAAGTGTTGAACAATGAACCCCC