Contig 013288:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012H20Sequence193013288 (4)752013288 (4)emb|CDP04459.1|2e-63unnamed protein product [Coffea canephora]
JMSF039O10Sequence663013288 (4)ref|XP_010110621.1|2e-59putative tyrosine-protein phosphatase [Morus notabilis] gb|EXC27243.1| putative 762013288 (4)ref|XP_007153998.1|3e-61hypothetical protein PHAVU_003G082500g [Phaseolus vulgaris] gb|ESW25992.1| hypot

Alignment

This contig is upended


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rJMSF012H20-                             CTATATATACATAATACAATCCAACATGCAAGAATGGCACT
                      ____________________________________________________________
consensus                                CTATATATACATAATACAATCCAACATGCAAGAATGGCACT
 
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rJMSF012H20-          TGAAATGTACACACACTGACACACACACACACTTATTCATTCATCAACTCTCTGAGCATG
                      ____________________________________________________________
consensus             TGAAATGTACACACACTGACACACACACACACTTATTCATTCATCAACTCTCTGAGCATG
 
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rJMSF012H20-          AAACAATGGCTGGGGCTGCCTGAAGCTGCAAATGTGAAATGACTCTATGAATCGCAAGTC
                      ____________________________________________________________
consensus             AAACAATGGCTGGGGCTGCCTGAAGCTGCAAATGTGAAATGACTCTATGAATCGCAAGTC
 
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rJMSF012H20-          GGACACCCGAGCCTTTGCAGCAGCGAATCTCTGGTACTCGTCGAAGATTGAAGTGAGGCA
                      ____________________________________________________________
consensus             GGACACCCGAGCCTTTGCAGCAGCGAATCTCTGGTACTCGTCGAAGATTGAAGTGAGGCA
 
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rJMSF012H20-          CCATCGCTGCAGTTTTCTCAAGCACCCCACGAGGCACCCGGTCCTTTCCTCGTTTGCAAT
                      ____________________________________________________________
consensus             CCATCGCTGCAGTTTTCTCAAGCACCCCACGAGGCACCCGGTCCTTTCCTCGTTTGCAAT
 
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rJMSF012H20-          GGATTAGCAGTGGATGGTTCCTTTTATCAAGGACAACTTTTAGTGCTTCTCTAATCATGT
                      ____________________________________________________________
consensus             GGATTAGCAGTGGATGGTTCCTTTTATCAAGGACAACTTTTAGTGCTTCTCTAATCATGT
 
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rJMSF012H20-          CTGCCGGGATGTTTACAAATGGTTCCTTGGATCCGTCGATGCCAAACTGAAAAAGGCGGA
rJMSF039O10-                                   CTTGGATCCGTCGATGCCAAACTGAAAAAGGCGGA
JMSF039O10+                                    CTTGGATCCGTCGATGCCAAACTGAAAAAGGCGGA
                      ____________________________________________________________
consensus             CTGCCGGGATGTTTACAAATGGTTCCTTGGATCCGTCGATGCCAAACTGAAAAAGGCGGA
 
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rJMSF012H20-          TTCCATTTGCATTGAGGAACTCAACATTAGCTTGAGGGTAGGGCTCAGGGCACAAACATA
rJMSF039O10-          TTCCATTTGCATTGAGGAACTCAACATTAGCTTGAGGGTAGGGCTCAGGGCACAAACATA
JMSF039O10+           TTCCATTTGCATTGAGGAACTCAACATTAGCTTGAGGGTAGGGCTCAGGGCACAAACATA
                      ____________________________________________________________
consensus             TTCCATTTGCATTGAGGAACTCAACATTAGCTTGAGGGTAGGGCTCAGGGCACAAACATA
 
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rJMSF012H20-          TGATCGAACGGAGGCCGAGGGTCTGCAGGAAATCGAAGTTGTCAGTGTCGGGGAAGCCGG
rJMSF039O10-          TGATCGAACGGAGGCCGAGGGTCTGCAGGAAATCGAAGTTGTCAGTGTCGGGGAAGCCGG
JMSF039O10+           TGATCGAACGGAGGCCGAGGGTCTGCAGGAAATCGAAGTTGTCAGTGTCGGGGAAGCCGG
                      ____________________________________________________________
consensus             TGATCGAACGGAGGCCGAGGGTCTGCAGGAAATCGAAGTTGTCAGTGTCGGGGAAGCCGG
 
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rJMSF012H20-          AGCGGAAGACGCCGTGATCGACCATCGCGAAATTCAGCGGCGGCACGAAGAGCTCGTCGC
rJMSF039O10-          AGCGGGAGACGCCGTGATCGACCATCGCGAAATTCAGCGGCGGCACGAAGAGCTCGTCGC
JMSF039O10+           AGCGGGAGACGCCGTGATCGACCATCGCGAAATTCAGCGGCGGCACGAAGAGCTCGTCGC
                      ____________________________________________________________
consensus             AGCGGGAGACGCCGTGATCGACCATCGCGAAATTCAGCGGCGGCACGAAGAGCTCGTCGC
 
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rJMSF012H20-          CCTCGTCTTCGCCGGCGTGACACACCGGCGGCTCGTGATTCTCCAGCTTCATCGCTTTCG
rJMSF039O10-          CCTCGTCTTCGCCGGCGTGACACACCGGCGGCTCGTGATTCTCCAGCTTCATCGCTTTCG
JMSF039O10+           CCTCGTCTTCGCCGGCGTGACACACCGGCGGCTCGTGATTCTCCAGCTTCATCGCTTTCG
                      ____________________________________________________________
consensus             CCTCGTCTTCGCCGGCGTGACACACCGGCGGCTCGTGATTCTCCAGCTTCATCGCTTTCG
 
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rJMSF012H20-          CCCCCAGAGAAATGCTCCGCCGTATACGACGGCTTACGGATACCTACGCCTGCTTGCGAG
rJMSF039O10-          CCCCCAGAGAAATGCTCCGCCGTATACGACGGCTTACGGATACCTACGCCTGCTTGCGAG
JMSF039O10+           CCCCCAGAGAAATGCTCCGCCGTATACGACGGCTTACGGATACCTACGCCTGCTTGCGAG
JMSF012H20+                                                          GCCTGCTTGCGAG
                      ____________________________________________________________
consensus             CCCCCAGAGAAATGCTCCGCCGTATACGACGGCTTACGGATACCTACGCCTGCTTGCGAG
 
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rJMSF012H20-          CTTGCCGGTGTTGTGAAAGCACAAGTATGCGCAACTTATATATATGTAGGA         
rJMSF039O10-          CTTGCCGGTGTTGTGAAAGCACAAGTATGCGCAACTTATATATATGTAGGAGAGAGAGAG
JMSF039O10+           CTTGCCGGTGTTGTGAAAGCACAAGTATGCGCAACTTATATATATGTAGGAGAGAGAGAG
JMSF012H20+           CTAGCCGGTGTTGTGAAAGCACAAGTATGCGCAACTTATATATATGTAGGAGAGAGAGAG
                      ____________________________________________________________
consensus             CTTGCCGGTGTTGTGAAAGCACAAGTATGCGCAACTTATATATATGTAGGAGAGAGAGAG
 
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rJMSF039O10-          GGGAAAGAAGAAGGAGATGAACAGATGAAAATCGGCGGCGGAATCGAACCTTGGAGCATA
JMSF039O10+           GGGAAAGAAGAAGGAGATGAACAGATGAAAATCGGCGGCGGAATCGAACCTTGGAGCATA
JMSF012H20+           GGGAAAGAAGAAGGAGATGAACAGATGAAAATCGGCGGCGGAATCGAACCTTGGAGCATA
                      ____________________________________________________________
consensus             GGGAAAGAAGAAGGAGATGAACAGATGAAAATCGGCGGCGGAATCGAACCTTGGAGCATA
 
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rJMSF039O10-          CGAGAATCCCGCCGAAAGGCGGCTGGTTAAACGGGGCGGTGAAAATTGGATGGAGCT   
JMSF039O10+           CGAGAATCCCGCCGAAAGGCGGCTGGTTAAACGGGGCGGTGAAGATTGGATGGAGCT   
JMSF012H20+           CGAGAATCCCGCCGAAAGGCGGCTGGTTAAACGGGGCGGTGAAGATTGGATGGAGCTATC
                      ____________________________________________________________
consensus             CGAGAATCCCGCCGAAAGGCGGCTGGTTAAACGGGGCGGTGAAGATTGGATGGAGCTATC