Contig 013287:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007H11Sequence609013287 (8)emb|CDP01760.1|9e-102unnamed protein product [Coffea canephora]
JMFF039D03Sequence518013287 (8)ref|XP_009775121.1|5e-81PREDICTED: eukaryotic translation initiation factor 6-2 [Nicotiana sylvestris] 665013287 (8)ref|XP_009775121.1|4e-124PREDICTED: eukaryotic translation initiation factor 6-2 [Nicotiana sylvestris]
JMSF012G02Sequence231013287 (8)gb|KJB60504.1|8e-09hypothetical protein B456_009G309100 [Gossypium raimondii]726013911 (3)ref|XP_009604635.1|5e-106PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Nicotiana
JMSF017L16Sequence510013287 (8)emb|CDP01760.1|7e-105unnamed protein product [Coffea canephora]792013287 (8)emb|CDP01760.1|1e-159unnamed protein product [Coffea canephora]
JMSF038M14Sequence650013287 (8)emb|CDP01760.1|1e-114unnamed protein product [Coffea canephora]879013287 (8)emb|CDP01760.1|4e-173unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF039D03-                        TTTGATTACNATGACAACATCATTTCACATTACAAACACAAGAACA
                      ____________________________________________________________
consensus                           TTTGATTACNATGACAACATCATTTCACATTACAAACACAAGAACA
 
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rJMFF039D03-          AAGCAAAGAGCAGAAAAATCAATTCCCTTCTATATAGTATTGGTGCCAAGGATGCTTAAA
                      ____________________________________________________________
consensus             AAGCAAAGAGCAGAAAAATCAATTCCCTTCTATATAGTATTGGTGCCAAGGATGCTTAAA
 
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rJMFF039D03-          TGTGAACAAAACTTTAGACATAGCTGTCAATCAACGATTTTCGCATTTCATCGACAATAG
rJMSF017L16-                           ACATAGCTGTCAATCAACGATTTTCGCATTTCATCGACAATAG
rJMSF038M14-                           ACATAGCTGTCAATCAACGATTTTCGCATTTCATCGACAATAG
                      ____________________________________________________________
consensus             TGTGAACAAAACTTTAGACATAGCTGTCAATCAACGATTTTCGCATTTCATCGACAATAG
 
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rJMFF039D03-          CACTAGGTTGAGCCTCCCTCAACTTGAACACGCTCTCAATGACAGACAACTCCGTTGCGG
rJMSF017L16-          CACTAGGTTGAGCCTCCCTCAACTTGAACACGCTCTCAATGACAGACAACTCCGTTGCGG
rJMSF038M14-          CACTAGGTTGAGCCTCCCTCAACTTGAACACGCTCTCAATGACAGACAACTCCGTTGCGG
                      ____________________________________________________________
consensus             CACTAGGTTGAGCCTCCCTCAACTTGAACACGCTCTCAATGACAGACAACTCCGTTGCGG
 
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rJMFF039D03-          TGGTATCAGAGCCACAGAACGCTGTCCAGTCATTCACTGTCAATCCGGCAGCAATCACGT
rJMSF017L16-          TGGTATCAGAGCCACAGAACGCTGTCCAGTCATTCACTGTCAATCCGGCAGCAATCACGT
rJMSF038M14-          TGGTATCAGAGCCACAGAACGCTGTCCAGTCATTCACTGTCAATCCGGCAGCAATCACGT
                      ____________________________________________________________
consensus             TGGTATCAGAGCCACAGAACGCTGTCCAGTCATTCACTGTCAATCCGGCAGCAATCACGT
 
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rJMFF039D03-          CACTCCCACGATTCACAGTTCCAGCCACCAGAGGAACCTGGAGGAGAGTTGAAAGCTCGT
rJMSF017L16-          CACTCCCACGATTCACAGTTCCAGCCACCAGAGGAACCTGGAGGAGAGTTGAAAGCTCGT
rJMSF038M14-          CACTCCCACGATTCACAGTTCCAGCCACCAGAGGAACCTGGAGGAGAGTTGAAAGCTCGT
                      ____________________________________________________________
consensus             CACTCCCACGATTCACAGTTCCAGCCACCAGAGGAACCTGGAGGAGAGTTGAAAGCTCGT
 
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rJMFF039D03-          CCAAGTCTTCAATAGATGTATGAGGATGTACCAATCCACCTCTATTAGAAAAAGCACAAT
rJMSF017L16-          CCAAGTCTTCAATAGATGTATGAGGATGTACCAATCCACCTCTATTAGAAAAAGCACAAT
rJMSF038M14-          CCAAGTCTTCAATAGATGTATGAGGATGTACCAATCCACCTCTATTAGAAAAAGCACAAT
JMFF007H11+                                                       TTAGAAAAAGCACAAT
JMSF017L16+                                                       TTAGAAAAAGCACAAT
JMSF038M14+                 CTTCAATAGATGTATGAGGATGTACCAATCCACCTCTATTAGAAAAAGCACAAT
                      ____________________________________________________________
consensus             CCAAGTCTTCAATAGATGTATGAGGATGTACCAATCCACCTCTATTAGAAAAAGCACAAT
 
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rJMFF039D03-          AGCTGCCAACAAGGATGTTTCCGGCAATTGTCTGCCTAAAGACTTCAACTCCAAGAACAT
rJMSF017L16-          AGCTGCCAACAAGGATGTTTCCGGCAATTGTCTGCCTAAAGACTTCAACTCCAAGAACAT
rJMSF038M14-          AGCTGCCAACAAGGATGTTTCCGGCAATTGTCTGCCTAAAGACTTCAACTCCAAGAACAT
JMFF007H11+           AGNTGCCAACAAGGATGTTTCCGGCAATTGTNTGCCTAAAGACTTCAACTCCAAGAACAT
JMSF017L16+           AGCTGCCAACAAGGATGTTTCCGGCAATTGTCTGCCTAAAGACTTCAACTCCAAGAACAT
JMSF038M14+           AGCTGCCAACAAGGATGTTTCCGGCAATTGTCTGCCTAAAGACTTCAACTCCAAGAACAT
                      ____________________________________________________________
consensus             AGCTGCCAACAAGGATGTTTCCGGCAATTGTCTGCCTAAAGACTTCAACTCCAAGAACAT
 
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rJMFF039D03-          CAGCGATCAACTCTTCAGTTTCCCTATCAAGATCTGTGTGTGTAAGAGCAACATGGTCAT
rJMSF017L16-          CAGCGATCAACTCTTCAGTTTCCCTATCAAGATCTGTGTGTGTAAGAGCAACATGGTCAT
rJMSF038M14-          CAGCGATCAACTCTTCAGTTTCCCTATCAAGATCTGTGTGTGTAAGAGCAACATGGTCAT
JMFF007H11+           CAGCGATCAACTCTTCAGTTTCCCTATCAAGATCTGTGTGTGTAAGAGCAACATGGTCAT
JMFF039D03+                            GTTTCCCTATCAAGATCTGTGTGTGTAAGAGCAACATGGTCAT
JMSF017L16+           CAGCGATCAACTCTTCAGTTTCCCTATCAAGATCTGTGTGTGTAAGAGCAACATGGTCAT
JMSF038M14+           CAGCGATCAACTCTTCAGTTTCCCTATCAAGATCTGTGTGTGTAAGAGCAACATGGTCAT
                      ____________________________________________________________
consensus             CAGCGATCAACTCTTCAGTTTCCCTATCAAGATCTGTGTGTGTAAGAGCAACATGGTCAT
 
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rJMFF039D03-          TGCAAGCAATGCAGTTGCCCAGAGCAGACAATCTCTCATCAACACGCTGAACAACAACAC
rJMSF017L16-          TGCAAGCAATGCAGTTGCCCAGAGCAGACAATCTCTCATCAACACGCTGAACAACAACAC
rJMSF038M14-          TGCAAGCAATGCAGTTGCCCAGAGCAGACAATCTCTCATCAACACGCTGAACAACAACAC
JMFF007H11+           TGCAAGCAACGCAGTTGCCCAGAGCAGACAATCTCTCATCAACACGCTGAACAACAACAC
JMFF039D03+           TGCAAGCAATGCAGTTGCCCAGAGCAGACAATCTCTCATCAACACGCTGAACAACAACAC
JMSF017L16+           TGCAAGCAATGCAGTTGCCCAGAGCAGACAATCTCTCATCAACACGCTGAACAACAACAC
JMSF038M14+           TGCAAGCAATGCAGTTGCCCAGAGCAGACAATCTCTCATCAACACGCTGAACAACAACAC
                      ____________________________________________________________
consensus             TGCAAGCAATGCAGTTGCCCAGAGCAGACAATCTCTCATCAACACGCTGAACAACAACAC
 
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rJMFF039D03-          CATCTGGCAAACTGTTTCTCAAGTGTTGAAGCTCTTGGTCAGTAGTAGTATGAGGCAAAA
rJMSF017L16-          CATCTGGCAAACTGTTTCTCAAGTGTTGAAGCTCTTGGTCAGTAGTAGTATGAGGCAAAA
rJMSF038M14-          CATCTGGCAAACTGTTTCTCAAGTGTTGAAGCTCTTGGTCAGTAGTAGTATGAGGCAAAA
JMFF007H11+           CATCTGGCAAACTGTTTCTCAAGTGTTGAAGCTCTTGGTCAGTAGTAGTATGAGGCAAAA
JMFF039D03+           CATCTGGCAAACTGTTTCTCAAGTGTTGAAGCTCTTGGTCAGTAGTAGTATGAGGCAAAA
JMSF017L16+           CATCTGGCAAACTGTTTCTCAAGTGTTGAAGCTCTTGGTCAGTAGTAGTATGAGGCAAAA
JMSF038M14+           CATCTGGCAAACTGTTTCTCAAGTGTTGAAGCTCTTGGTCAGTAGTAGTATGAGGCAAAA
                      ____________________________________________________________
consensus             CATCTGGCAAACTGTTTCTCAAGTGTTGAAGCTCTTGGTCAGTAGTAGTATGAGGCAAAA
 
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rJMFF039D03-          TAAGCCCATTTTTGTTTCC                                         
rJMSF017L16-          TAAGCCCATTTTTGTTTCCAGCACAAAGCCGTCCAACTATCCGGGTTCCACCTATGGAGG
rJMSF038M14-          TAAGCCCATTTTTGTTTCCAGCACAAAGCCGTCCAACTATCCGGGTTCCACCTATGGAGG
JMFF007H11+           TAAGCCCATTTTTGTTTCCAGCACAAAGCCGTCCAACTATCCGGGTTCCACCTATGGAGG
JMFF039D03+           TAAGCCCATTTTTGTTTCCAGCACAAAGCCGTCCAACTATCCGGGTTCCACCTATGGAGG
JMSF017L16+           TAAGCCCATTTTTGTTTCCAGCACAAAGCCGTCCAACTATCCGGGTTCCACCTATGGAGG
JMSF038M14+           TAAGCCCATTTTTGTTTCCAGCACAAAGCCGTCCAACTATCCGGGTTCCACCTATGGAGG
                      ____________________________________________________________
consensus             TAAGCCCATTTTTGTTTCCAGCACAAAGCCGTCCAACTATCCGGGTTCCACCTATGGAGG
 
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rJMSF017L16-          TTTTAATTACTGGAATGACATCTGCGAGCTCAGATTCGAACGTGCTGTAAAAGTTTTCTG
rJMSF038M14-          TTTTAATTACTGGAATGACATCTGCGAGCTCAGATTCGAACGTGCTGTAAAAGTTTTCTG
JMFF007H11+           TTTTAATTACTGGAATGACATCTGCGAGCTCAGATTCGAACGTGCTGTAAAAGTTTTCTG
JMFF039D03+           TTTTAATTACTGGAATGACATCTGCGAGCTCAGATTCGAACGTGCTGTAAAAGTTTTCTG
JMSF017L16+           TTTTAATTACTGGAATGACATCTGCGAGCTCAGATTCGAACGTGCTGTAAAAGTTTTCTG
JMSF038M14+           TTTTAATTACTGGAATGACATCTGCGAGCTCAGATTCGAACGTGCTGTAAAAGTTTTCTG
                      ____________________________________________________________
consensus             TTTTAATTACTGGAATGACATCTGCGAGCTCAGATTCGAACGTGCTGTAAAAGTTTTCTG
 
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rJMSF017L16-          ATCCACCTATGGCGACCAAGCAATAAGCATTTGTCAGCTTGG                  
rJMSF038M14-          ATCCACCTATGGCGACCAAGCAATAAGCATTTGTCAGCTTGGAGAAGACCCCAATTTCAC
JMFF007H11+           ATCCACCTATGGCGACCAAGCAATAAGCATTTGTCAGCTTGGAGAAGACCCCAATTTCAC
JMFF039D03+           ATCCACCTATGGCGACCAAGCAATAAGCATTTGTCAGCTTGGAGAAGACCCCAATTTCAC
JMSF017L16+           ATCCACCTATGGCGACCAAGCAATAAGCATTTGTCAGCTTGGAGAAGACCCCAATTTCAC
JMSF038M14+           ATCCACCTATGGCGACCAAGCAATAAGCATTTGTCAGCTTGGAGAAGACCCCAATTTCAC
JMSF012G02+                    TGGCGACCAAGCAATAAGCATTTGTCAGCTTGGAGAAGACCCCAATTTCAC
                      ____________________________________________________________
consensus             ATCCACCTATGGCGACCAAGCAATAAGCATTTGTCAGCTTGGAGAAGACCCCAATTTCAC
 
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rJMSF038M14-          ATGAATTCTCGAACTGCAACCTAGTTGCCATGGTATTAACCAAACCAGCGGCTTTCAACT
JMFF007H11+           ATGAATTCTCGAACTGCAACCTAGTTGCCATGGTATTAACCAAACCAGCGGCTTTCAACT
JMFF039D03+           ATGAATTCTCGAACTGCAACCTAGTTGCCATGGTATTAACCAAACCAGCGGCTTTCAACT
JMSF017L16+           ATGAATTCTCGAACTGCAACCTAGTTGCCATGGTATTAACCAAACCAGCGGCTTTCAACT
JMSF038M14+           ATGAATTCTCGAACTGCAACCTAGTTGCCATGGTATTAACCAAACCAGCGGCTTTCAACT
JMSF012G02+           ATGAATTCTCGAACTGCAACCTAGTTGCCATGGTATTAACCAAACCAGCGGCTTTCAACT
                      ____________________________________________________________
consensus             ATGAATTCTCGAACTGCAACCTAGTTGCCATGGTATTAACCAAACCAGCGGCTTTCAACT
 
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rJMSF038M14-          TCTCTG                                                      
JMFF007H11+           TCTCTGAAAGACTGAAACAATTGGCGGCCCTCGTAGCTCAAAACCCTCTCTGGTTCTCTG
JMFF039D03+           TCTCTGAAAGACTGAAACAATTGGCGGCCCTCGTAGCTCAAAACCCTCTCTGGTTCTCTG
JMSF017L16+           TCTCTGAAAGACT                                               
JMSF038M14+           TCTCTGAAAGACTGAAACAATTGGCGGCCCTCGTAGCTCAAAACCCTCTCTGGTTCTCTG
JMSF012G02+           TCTCTGAAAGACTGAAACAATTGGCGGCCCTCGTAGCTCAAAACCCTCTCTGGTTCTCTG
                      ____________________________________________________________
consensus             TCTCTGAAAGACTGAAACAATTGGCGGCCCTCGTAGCTCAAAACCCTCTCTGGTTCTCTG
 
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JMFF007H11+           CAAGCCGCGAAAAAAACCCCTACGGCCCTACCAGGTTCTACTCTGCAAAACCC       
JMFF039D03+           CAAGCCGCGAAAAAAACCCCTACGGCCCTACCAGGTTCTACTCTGCAAAACCC       
JMSF038M14+           CAAGCCGCGAAAAAAACCCCTACGGCCCTACCAGGTTCTACTCTGCAAAACCC       
JMSF012G02+           CAAGCCGCGAAAAAAACCCCTACGGCCCTACCAGGTTCTACTCTGCAAAACCCTTGCTCC
                      ____________________________________________________________
consensus             CAAGCCGCGAAAAAAACCCCTACGGCCCTACCAGGTTCTACTCTGCAAAACCCTTGCTCC