Contig 013286:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-                       GATCATTGTATTGGGTTTCTTCTAATTCTGAAGGCACTGGACATCAA
                      ____________________________________________________________
consensus                          GATCATTGTATTGGGTTTCTTCTAATTCTGAAGGCACTGGACATCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          TTGATGCAGTCTGCCAGAAAGTTGTGTGATAGTATCCCTGGTAACTTTGAAACACCACAG
                      ____________________________________________________________
consensus             TTGATGCAGTCTGCCAGAAAGTTGTGTGATAGTATCCCTGGTAACTTTGAAACACCACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          GAAGACAAAAGAGTGTTGGAATCCGAACTACTACGAAGGGAAATATGCATGCCATTTTCT
                      ____________________________________________________________
consensus             GAAGACAAAAGAGTGTTGGAATCCGAACTACTACGAAGGGAAATATGCATGCCATTTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          GGAAAGCTTCCCACAAAGAAAAGAACAGGCAGAAGATCTTTGAGAAATACCATCCAGCAT
                      ____________________________________________________________
consensus             GGAAAGCTTCCCACAAAGAAAAGAACAGGCAGAAGATCTTTGAGAAATACCATCCAGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          AAGAGTCCTCAAAAAACACTCCAATTCTCCGGTGATCCCTCAAACAGTGTATCAGTAGAT
JMSF012C11+                                                       CAGTGTATCAGTAGAT
                      ____________________________________________________________
consensus             AAGAGTCCTCAAAAAACACTCCAATTCTCCGGTGATCCCTCAAACAGTGTATCAGTAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          CATTGTAATGGGGCTTCTACTAATTCTGAAGGTACTGGACAACAATTGATGCAGTCTGCC
JMSF012C11+           CATTGTAATGGGGCTTCTACTAATTCTGAAGGTACTGGACAACAATTGATGCAGTCTGCC
                      ____________________________________________________________
consensus             CATTGTAATGGGGCTTCTACTAATTCTGAAGGTACTGGACAACAATTGATGCAGTCTGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          AAAAAGTTGTATGGTAATATCCCTGGTAACTTTGAAACACCACAGGAAGATGAAAGAGTG
JMSF012C11+           AAAAAGTTGTATGGTAATATCCCTGGTAACTTTGAAACACCACAGGAAGATGAAAGAGTG
                      ____________________________________________________________
consensus             AAAAAGTTGTATGGTAATATCCCTGGTAACTTTGAAACACCACAGGAAGATGAAAGAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          TTGGAGTCTGAACTACTACCCAGGGAAATAGGCATGCCATTTTCTGGAAAGCTTCCTACA
JMSF012C11+           TTGGAGTCTGAACTACTACCCAGGGAAATAGGCATGCCATTTTCTGGAAAGCTTCCTACA
                      ____________________________________________________________
consensus             TTGGAGTCTGAACTACTACCCAGGGAAATAGGCATGCCATTTTCTGGAAAGCTTCCTACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          AAGAAAAGAACAGTCAGAAGATATTTAAGAAACACCATCCAACATAAAGAATTATATAAT
JMSF012C11+           AAGAAAAGAACAGTCAGAAGATATTTAAGAAACACCATCCAACATAAAGAATTATATAAT
                      ____________________________________________________________
consensus             AAGAAAAGAACAGTCAGAAGATATTTAAGAAACACCATCCAACATAAAGAATTATATAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          GAGAAATCCTTCTCAAGACAGTTAGATGTTGATTTTAATTCATTCAAAGTTTCAAACTGT
JMSF012C11+           GAGAAATCCTTCTCAAGACAGTTAGATGTTGATTTTAATTCATTCAAAGTTTCAAACTGT
                      ____________________________________________________________
consensus             GAGAAATCCTTCTCAAGACAGTTAGATGTTGATTTTAATTCATTCAAAGTTTCAAACTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          GGCTTGGATGAGCAAAGGGGGGAAATTAGGAAAATTTCCTCAGGTACTCATCGAAATAGG
JMSF012C11+           GGCTTGGATGAGCAAAGGGGGGAAATTAGGAAAATTTCCTCAGGTACTCATCGAAATAGG
                      ____________________________________________________________
consensus             GGCTTGGATGAGCAAAGGGGGGAAATTAGGAAAATTTCCTCAGGTACTCATCGAAATAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          AAGCAGTCATCCTCAAGTTCTTTGAAATGGGTTACTGATCAAAGTTTCAAAAAGTGCCCA
JMSF012C11+           AAGCAGTCATCCTCAAGTTCTTTGAAATGGGTTACTGATCAAAGTTTCAAAAAGTGCCCA
                      ____________________________________________________________
consensus             AAGCAGTCATCCTCAAGTTCTTTGAAATGGGTTACTGATCAAAGTTTCAAAAAGTGCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF012C11-          GCGGTTATGAAGTTCAATTTCCCAAAGAAAAGAAGAAAGA                    
JMSF012C11+           GCGGTTATGAAGTTCAATTTCCAAAAGAAAAGAAGAAAGAAAGATGAAGTTATGAAGTCC
                      ____________________________________________________________
consensus             GCGGTTATGAAGTTCAATTTCCCAAAGAAAAGAAGAAAGAAAGATGAAGTTATGAAGTCC