| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF037O09 | Sequence | 572 | 013281 (6) | ref|XP_004231974.1| | 199 | PREDICTED: uncharacterized protein LOC101251835 [Solanum lycopersicum] | 635 | 013281 (6) | ref|XP_004231974.1| | 76.6 | PREDICTED: uncharacterized protein LOC101251835 [Solanum lycopersicum] |
| JMSF011M19 | Sequence | 327 | 013281 (6) | gb|KDO81285.1| | 1e-24 | hypothetical protein CISIN_1g048210mg, partial [Citrus sinensis] | 734 | 013281 (6) | ref|XP_004231974.1| | 175 | PREDICTED: uncharacterized protein LOC101251835 [Solanum lycopersicum] |
| JMSF019J02 | Sequence | 442 | 013281 (6) | ref|XP_004231974.1| | 166 | PREDICTED: uncharacterized protein LOC101251835 [Solanum lycopersicum] | 731 | 013281 (6) | ref|XP_004231974.1| | 167 | PREDICTED: uncharacterized protein LOC101251835 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF037O09- AATAACCATTTTTAACAAAGAATAATA
____________________________________________________________
consensus AATAACCATTTTTAACAAAGAATAATA
. : . : . : . : . : . :
rJMFF037O09- ATCATGACACCAACAAAACCGAAACAAAAGCCCAA-TCATAATAATAATTACTTAATGGT
rJMSF019J02- GACACCAACAAAACCGAAACAAAAGCCCAATTCATAATAATAATTACTTAATGGT
rJMSF011M19- TCATAATAATAATTACTTAATGGT
____________________________________________________________
consensus ATCATGACACCAACAAAACCGAAACAAAAGCCCAATTCATAATAATAATTACTTAATGGT
. : . : . : . : . : . :
rJMFF037O09- AGTATTTACTTCCCCTGTACCTTTGATGGTAAATATACGGTAAAAAGTTGGAAACCCAAA
rJMSF019J02- AGTATTTACTTCCCCTGTACCTTTGATGGTAAATATACGGTAAAAAGTTGGAAACCCAAA
rJMSF011M19- AGTATTTACTTCCCCTGTACCTTTGATGGTAAATATACGGTAAAAAGTTGGAAACCCAAA
____________________________________________________________
consensus AGTATTTACTTCCCCTGTACCTTTGATGGTAAATATACGGTAAAAAGTTGGAAACCCAAA
. : . : . : . : . : . :
rJMFF037O09- ATGGTAATACTTAAGCGGTGGGATGATCGCCATTGACTGAGTAGTTGGGTTCTCCGGTAG
rJMSF019J02- ATGGTAATACTTAAGCGGTGGGATGATCGCCATTGACTGAGTAGTTGGGTTCTCCGGTAG
rJMSF011M19- ATGGTAATACTTAAGCGGTGGGATGATCGCCATTGACTGAGTAGTTGGGTTCTCCGGTAG
____________________________________________________________
consensus ATGGTAATACTTAAGCGGTGGGATGATCGCCATTGACTGAGTAGTTGGGTTCTCCGGTAG
. : . : . : . : . : . :
rJMFF037O09- ACACCATTGCCGGCTTCTGCTCCGGAACGGGGACGGTTGGCATCGCCGGAACAAATTTGT
rJMSF019J02- ACACCATTGCCGGCTTCTGCTCCGGAACGGGGACGGTTGGCATCGCCGGAACAAATTTGT
rJMSF011M19- ACACCATTGCCGGCTTCTGCTCCGGAACGGGGACGGTTGGCATCGCCGGAACAAATTTGT
____________________________________________________________
consensus ACACCATTGCCGGCTTCTGCTCCGGAACGGGGACGGTTGGCATCGCCGGAACAAATTTGT
. : . : . : . : . : . :
rJMFF037O09- AAATTGGGTGTTCCCGGTTTTTGTCACCGCCGAACTGCCCGACGGCGGTATGGAATCCAC
rJMSF019J02- AAATTGGGTGTTCCCGGTTTTTGTCACCGCCGAACTGCCCGACGGCGGTATGGAATCCAC
rJMSF011M19- AAATTGGGTGTTCCCGGTTTTTGTCACCGCCGAACTGCCCGACGGCGGTATGGAATCCAC
____________________________________________________________
consensus AAATTGGGTGTTCCCGGTTTTTGTCACCGCCGAACTGCCCGACGGCGGTATGGAATCCAC
. : . : . : . : . : . :
rJMFF037O09- CCGCCATCATGGGTAATCCGTAAACCATTTTCATCCCGTTTGCATAGACGACACCACTGG
rJMSF019J02- CCGCCATCATGGGTAATCCGTAAACCATTTTCATCCCGTTTGCATAGACGACACCACTGG
rJMSF011M19- CCGCCATCATGGGTAATCCGTAAACCATTTTCATCCCGTTTGCATAGACGACACCACTGG
____________________________________________________________
consensus CCGCCATCATGGGTAATCCGTAAACCATTTTCATCCCGTTTGCATAGACGACACCACTGG
. : . : . : . : . : . :
rJMFF037O09- TCACGTGAGCTTCATGTAGGTGTGGTGGGAGATGAGTCTGAAGCAGCATCAGCTTGTTAC
rJMSF019J02- TCACGTGAGCTTCATGTAGGTGTGGTGGGAGATGAGTCTGAAGCAGCATCAGCTTGTTAC
rJMSF011M19- TCACGTGAGCTTCATGTAGGTGTGGTGGGAGATGAGTCTGAAGCAGCATCAGCTTGTTAC
____________________________________________________________
consensus TCACGTGAGCTTCATGTAGGTGTGGTGGGAGATGAGTCTGAAGCAGCATCAGCTTGTTAC
. : . : . : . : . : . :
rJMFF037O09- CCGATCCAGAATTCCCGGGTACGGCACCATTTTCCTTGTGTGTTTCCGGGCCGGGAATTT
rJMSF019J02- CCGATCCAGAATTCCCGGGTACGGCACCATTTTCCTTGTGTGTTTCCGGGCCGGGAATTT
rJMSF011M19- CCGATCCAGAATTCCCGGGTACGGCACCATTTTCCTTGTGTGTTTCCGGGCCGGGAATTT
____________________________________________________________
consensus CCGATCCAGAATTCCCGGGTACGGCACCATTTTCCTTGTGTGTTTCCGGGCCGGGAATTT
. : . : . : . : . : . :
rJMFF037O09- CGGGGACAGAACATTCCTCCAGCTACAGGGATGTGCAATTGGAGAAGATCGTGCGACGTC
rJMSF019J02- CGGGGACAG-ACATTCCTCCAGCTACAGGGATGTGCAATTGGAGAAGATCGTGCGACGTC
rJMSF011M19- CGGGGACAG-ACATTCCTCCAGCTACAGGGATGTGCAATTGGAGAAGATCGTGCGACGTC
JMFF037O09+ ACAGGGATGTGCAATTGGAGAAGATCGTGCGACGTC
____________________________________________________________
consensus CGGGGACAG-ACATTCCTCCAGCTACAGGGATGTGCAATTGGAGAAGATCGTGCGACGTC
. : . : . : . : . : . :
rJMFF037O09- GGCGTG-ATACTCGGCTGGTAATCCGTATCGAATCCGAACAGGAAATCCGGATTCAGCGG
rJMSF019J02- GGCGTG-ATACTCGGCTGGTAATCCGTATCGAATCCGAACAGGAAATCCGGATTCAGCGG
rJMSF011M19- GGCGTG-ATACTCGGCTGGTAATCCGTATCGAATCCGAACAGGAAATCCGGATTCAGCGG
JMFF037O09+ GGCGTGAATACTCGGCTGGTAATCCGTATCGAATCCGAACAGGAAATCCGGATTCAGCGG
____________________________________________________________
consensus GGCGTG-ATACTCGGCTGGTAATCCGTATCGAATCCGAACAGGAAATCCGGATTCAGCGG
. : . : . : . : . : . :
rJMFF037O09- CGCATCGGAG
rJMSF019J02- CGCATCGGAGTCGGGTTTGGCGGGGCGGTTCGGGTTGAACAGGAAGAGCCTCAAGCGAGC
rJMSF011M19- CGCATCGGAGTCGGGTTTGGCGGGGCGGTTCGGGTTGAACAGGAAGAGCCTCAAGCGAGC
JMFF037O09+ CGCATCGGAGTCGGGTTTGGCGGGGCGGTTCGGGTTGAACAGGAAGAGCCTCAAGCGAGC
JMSF019J02+ AACAGGAAGAGCCTCAAGCGAGC
____________________________________________________________
consensus CGCATCGGAGTCGGGTTTGGCGGGGCGGTTCGGGTTGAACAGGAAGAGCCTCAAGCGAGC
. : . : . : . : . : . :
rJMSF019J02- CGGCTTGGCGGAACCCTTGTGCATGCGGTCGTACTCAACCATCATGTGCTCCACATCATC
rJMSF011M19- CGGCTTGGCGGAACCCTTGTGCATGCGGTCGTACTCAACCATCATGTGCTCCACATCATC
JMFF037O09+ CGGCTTGGCGGAACCCTTGTGCATGCGGTCGTACTCAACCATCATGTGCTCCACATCATC
JMSF019J02+ CGGCTNGGCGGAACCCTTGTGCATGCGGTCGTACTCAACCATCATGTGCTCCACATCATC
____________________________________________________________
consensus CGGCTTGGCGGAACCCTTGTGCATGCGGTCGTACTCAACCATCATGTGCTCCACATCATC
. : . : . : . : . : . :
rJMSF019J02- GTCGTCGATCA
rJMSF011M19- GTCGTCGATCANAGTCACCAAAGCGTCCAGA
JMFF037O09+ GTCGTCGATCAGAGTCACCAAAGCGTCCAGATCTTCGCCCGGCAACTGGTACTTTATACA
JMSF019J02+ GTCGTCGATCAGAGTCACCAAAGCGTCCAGATCTTCGCCCGGCAACTGGTACTTTATACA
JMSF011M19+ GGCAACTGGTACTTTATACA
____________________________________________________________
consensus GTCGTCGATCAGAGTCACCAAAGCGTCCAGATCTTCGCCCGGCAACTGGTACTTTATACA
. : . : . : . : . : . :
JMFF037O09+ AATCTCGCTGCAGTTACAGAGAGAGCTCAGCTTGGAGGAAATCTCCGAAAACCTGATTTT
JMSF019J02+ AATCTCGCTGCAGTTACAGAGAGAGCTCAGCTTGGAGGAAATCTCCGAAAACCTGATTTT
JMSF011M19+ AATCTCGCTGCAGTTACAGAGAGAGCTCAGCTTGGAGGAAATCTCCGAAAACCTGATTTT
____________________________________________________________
consensus AATCTCGCTGCAGTTACAGAGAGAGCTCAGCTTGGAGGAAATCTCCGAAAACCTGATTTT
. : . : . : . : . : . :
JMFF037O09+ CCGATCGACGGTGAGGATTTTGGTGTCTCCGCCGACGTACGCCAGCTGATTGTCCCGCTG
JMSF019J02+ CCGATCGACGGTGAGGATTTTGGTGTCTCCGCCGACGTACGCCAGCTGATTGTCCCGCTG
JMSF011M19+ CCGATCGACGGTGAGGATTTTGGTGTCTCCGCCGACGTACGCCAGCTGATTGTCCCGCTG
____________________________________________________________
consensus CCGATCGACGGTGAGGATTTTGGTGTCTCCGCCGACGTACGCCAGCTGATTGTCCCGCTG
. : . : . : . : . : . :
JMFF037O09+ CCGCGGCTGAATCTTCCCGCCGTAGCTGCACATCAGTTTCACCTTAGCCTTACATTTCGA
JMSF019J02+ CCGCGGCTGAATCTTCCCGCCGTAGCTGCACATCAGTTTCACCTTAGCCTTACATTTCGA
JMSF011M19+ CCGCGGCTGAATCTTCCCGCCGTAGCTGCACATCAGTTTCACCTTAGCCTTACATTTCGA
____________________________________________________________
consensus CCGCGGCTGAATCTTCCCGCCGTAGCTGCACATCAGTTTCACCTTAGCCTTACATTTCGA
. : . : . : . : . : . :
JMFF037O09+ ACCTTCGCCGTCGCCGTCGCCGCCGCCAGAAGAACAATTGATACTCTTCTGATTCTCCAT
JMSF019J02+ ACCTTCGCCGTCGCCGTCGCCGCCGCCAGAAGAACAATTGATACTCTTCTGATTCTCCAT
JMSF011M19+ ACCTTCGCCGTCGCCGTCGCCGCTGCCAGAAGAACAATTGATACTCTTCTGATTCTCCAT
____________________________________________________________
consensus ACCTTCGCCGTCGCCGTCGCCGCCGCCAGAAGAACAATTGATACTCTTCTGATTCTCCAT
. : . : . : . : . : . :
JMFF037O09+ CGACGATCTCTATCCCAGAGCGTAGCAGCAGAGAACTGGCGAAGTGAGTATTCAC
JMSF019J02+ CGACGATCTCTATCCCAGAGCGTAGCAGCAGAGAACTGGCGAAGTGAGTATTCAC
JMSF011M19+ CGACGATCTCTATCCCAGAGCGTAGCAGCAGAGAACTGGCGAAGTGAGTATTCACAATGC
____________________________________________________________
consensus CGACGATCTCTATCCCAGAGCGTAGCAGCAGAGAACTGGCGAAGTGAGTATTCACAATGC