Contig 013279:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS007D06+                                             CAAGTATTAAAATGCAGCAATTTACA
                      ____________________________________________________________
consensus                                               CAAGTATTAAAATGCAGCAATTTACA
 
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JMFS007D06+           ATGNCAAAGGCCATTTCTTGTTCTTCTGTTTCCCTCATCCACCAATTGACCCAAAAGAAG
                      ____________________________________________________________
consensus             ATGNCAAAGGCCATTTCTTGTTCTTCTGTTTCCCTCATCCACCAATTGACCCAAAAGAAG
 
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JMFS007D06+           AAAAACCATTACTTTCACTCAAGCAGGGGAAATGAGAGAAATGCAATAAATCAACTAGTG
                      ____________________________________________________________
consensus             AAAAACCATTACTTTCACTCAAGCAGGGGAAATGAGAGAAATGCAATAAATCAACTAGTG
 
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JMFS007D06+           AATAAAATCTTTGTTTGCCTCATAGTTTTCATCAAAATCAGCACTTGATCAGTTGATCAC
                      ____________________________________________________________
consensus             AATAAAATCTTTGTTTGCCTCATAGTTTTCATCAAAATCAGCACTTGATCAGTTGATCAC
 
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JMFS007D06+           ACTAAATTCACATCATCATACAAGAGGAAACAGAAACACAACAAAGCACAGCATCAACGA
                      ____________________________________________________________
consensus             ACTAAATTCACATCATCATACAAGAGGAAACAGAAACACAACAAAGCACAGCATCAACGA
 
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JMFS007D06+           TCCAACAACTCCCACAGACCCACAGAATCGATCTTTAAACCCATCATGCTTCCCTATGAA
                      ____________________________________________________________
consensus             TCCAACAACTCCCACAGACCCACAGAATCGATCTTTAAACCCATCATGCTTCCCTATGAA
 
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JMFS007D06+           TGATTGATCACAGCAGGAGTTCAAAAACCAAACGATATAAATAGAAAATTACCCAAAAAA
JMSF019H22+                                                               CCAAAAAA
JMSF037D13+                                                             ACCCAAAAAA
                      ____________________________________________________________
consensus             TGATTGATCACAGCAGGAGTTCAAAAACCAAACGATATAAATAGAAAATTACCCAAAAAA
 
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JMFS007D06+           GCAAATTTCCAATTCAAGACAACAACTCCTTATCGATCCCCATTTGAAGATCAGAAGAGC
JMSF019H22+           GCAAATTTCCAATTCAAGACAACAACTCCTTATCGATCCCCATTTGAAGATCAGAAGAGC
JMSF037D13+           GCAAATTTCCAATTCAAGACAACAACTCCTTATCGATCCCCATTTGAAGATCAGAAGAGC
JMSF011K16+                                                             TCAGAAGAGC
                      ____________________________________________________________
consensus             GCAAATTTCCAATTCAAGACAACAACTCCTTATCGATCCCCATTTGAAGATCAGAAGAGC
 
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JMFS007D06+           AGCATCGATGAAGCGGAGAGAACAAAAGATCTGGGAGTGATCTAGAAATGCTAGAGTGAT
JMSF019H22+           AGCATCGATGAAGCGGAGAGAACAAGAGATCTGGGAGTGATCTAGAAATGCTAGAGTGAT
JMSF018E07+                                                 GATCTAGAAATGCTAGAGTGAT
JMSF037D13+           AGCATCGATGAAGCGGAGAGAACAAGAGATCTGGGAGTGATCTAGAAATGCTAGAGTGAT
JMSF011K16+           AGCATCGATGAAGCGGAGAGANCAAGAGATCTGGGAGTGATCTAGAAATGCTAGAGTGAT
                      ____________________________________________________________
consensus             AGCATCGATGAAGCGGAGAGAACAAGAGATCTGGGAGTGATCTAGAAATGCTAGAGTGAT
 
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JMFS007D06+           GAATAAAGGGATTGGGAACTTGAGGAGTAACCGATGACGGTTTTCAAGGATTAAAAAAGA
JMSF019H22+           GAATAAAGGGATTGGGAACTTGAGGAGTAACCGATGACGGTTTTCAAGGATTAAAAAAGA
JMSF018E07+           GAATAAAGGGATTGGGAACTTGAGGAGTAACCGATGACGGTTTTCAAGGATTAAAAAAGA
JMSF037D13+           GAATAAAGGGATTGGGAACTTGAGGAGTAACCGATGACGGTTTTCAAGGATTAAAAAAGA
JMSF011K16+           GAATAAAGGGATTGGGAACTTGAGGAGTAACCGATGACGGTTTTCAAGGATTAAAAAAGA
                      ____________________________________________________________
consensus             GAATAAAGGGATTGGGAACTTGAGGAGTAACCGATGACGGTTTTCAAGGATTAAAAAAGA
 
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JMFS007D06+           CGAAATTATGCACGAGTTTTGGCAAGGAGGATGGGAGGGAGTTGGGTAGTGGTTACGCGG
JMSF019H22+           CGAAATTATGCACGAGTTTTGGCAAGGAGGATGGGAGGGAGTTGGGTAGTGGTTACGCGG
JMSF018E07+           CGAAATTATGCACGAGTTTTGGCAAGGAGGATGGGAGGGAGTTGGGTAGTGGTTACGCGG
JMSF037D13+           CGAAATTATGCACGAGTTTTGGCAAGGAGGATGGGAGGGAGTTGGGTAGTGGTTACGCGG
JMSF011K16+           CGAAATTATGCACGAGTTTTGGCAAGGAGGATGGGAGGGAGTTGGGTAGTGGTTACGCGG
                      ____________________________________________________________
consensus             CGAAATTATGCACGAGTTTTGGCAAGGAGGATGGGAGGGAGTTGGGTAGTGGTTACGCGG
 
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JMFS007D06+           ATTGGTGTTGAACGGATAGCGGGTGAG                                 
JMSF019H22+           ATTGGTGTTGAACGGATAGCGGGTGAGGAAGAAAAGGCCAAAGGATGATGCAGAAGGTGT
JMSF018E07+           ATTGGTGTTGAACGGATAGCGGGTGAGGAAGAAAAGGCCAAAGGATGATGCAGAAGGTGT
JMSF037D13+           ATTGGTGTTGAACGGATAGCGGGTGAGGAAGAAAAGGCCAAAGGATGATGCAGAAGGTGT
JMSF011K16+           ATTGGTGTTGAACGGATAGCGGGTGAGGAAGAAAAGGCCAAAGGATGATGCAGAAGGTGT
                      ____________________________________________________________
consensus             ATTGGTGTTGAACGGATAGCGGGTGAGGAAGAAAAGGCCAAAGGATGATGCAGAAGGTGT
 
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JMSF019H22+           GTCAAGAACAGCAAAGCTTCTTTATTTCGCAAAAATGGAAAAAATAAATAAATGATATAT
JMSF018E07+           GTCAAGAACAGCAAAGCTTCTTTATTTCGCAAAAATGGAAAAAATAAATAAATGATATAT
JMSF037D13+           GTCAAGAACAGCAAAGCTTCTTTATTTCGCAAAAATGGAAAAAATAAATAAATGATATAT
JMSF011K16+           GTCAAGAACAGCAAAGCTTCTTTATTTCGCAAAAATGGAAAAAATAAATAAATGATATAT
                      ____________________________________________________________
consensus             GTCAAGAACAGCAAAGCTTCTTTATTTCGCAAAAATGGAAAAAATAAATAAATGATATAT
 
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JMSF019H22+           AAATGGAGGAGAAAACGTCGAGTGACAGGGCCACCCGCCCAACGCCTTAA          
JMSF018E07+           AAATGGAGGAGAAAACGTCGAGTGACAGGGCCACCCGCCCAACGCCTTAA          
JMSF037D13+           AAATGGAGGAGAAAACGTCGAGTGACAGGGCCACCCGCCCAACGCCTTAA          
JMSF011K16+           AAATGGAGGAGAAAACGTCGAGTGACAGGGCCACCCGCCCAACGCCTTAATGCTAAACCC
                      ____________________________________________________________
consensus             AAATGGAGGAGAAAACGTCGAGTGACAGGGCCACCCGCCCAACGCCTTAATGCTAAACCC