clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF005M09 | Sequence | 507 | 013272 (5) | ref|XP_010318446.1| | 3e-80 | PREDICTED: 26S protease regulatory subunit 7 homolog A isoform X2 [Solanum lyco | 729 | 004100 (9) | emb|CAN80220.1| | 4e-120 | hypothetical protein VITISV_027893 [Vitis vinifera] |
JMFF011A13 | Sequence | 513 | 013272 (5) | gb|KDO53742.1| | 2e-116 | hypothetical protein CISIN_1g014332mg [Citrus sinensis] | 729 | 004100 (9) | emb|CAN80220.1| | 2e-106 | hypothetical protein VITISV_027893 [Vitis vinifera] |
JMFF042L18 | Sequence | 645 | 013272 (5) | ref|XP_010318446.1| | 2e-112 | PREDICTED: 26S protease regulatory subunit 7 homolog A isoform X2 [Solanum lyco | 612 | 004100 (9) | emb|CAN80220.1| | 4e-68 | hypothetical protein VITISV_027893 [Vitis vinifera] |
JMSF009B23 | Sequence | 268 | 013272 (5) | ref|XP_006493392.1| | 3e-54 | PREDICTED: 26S protease regulatory subunit 7-like [Citrus sinensis] | 770 | 004100 (9) | gb|ABR25957.1| | 1e-132 | 26S protease regulatory subunit 7 [Oryza sativa Indica Group] |
JMSF011A09 | Sequence | 202 | 013272 (5) | ref|XP_010318446.1| | 3e-17 | PREDICTED: 26S protease regulatory subunit 7 homolog A isoform X2 [Solanum lyco | 779 | 004100 (9) | gb|ACU19621.1| | 5e-135 | unknown [Glycine max] |
This contig is upended
. : . : . : . : . : . :
JMFF011A13+ TATTAGCCACTGCCCTAGCCAGTAGTGTTTTCCCTGT
____________________________________________________________
consensus TATTAGCCACTGCCCTAGCCAGTAGTGTTTTCCCTGT
. : . : . : . : . : . :
JMFF011A13+ TCCAGGAGGACCATAGCAAAGAACACCNTTAGGTGGGTCAATTCCGAGCTTCACAAACTT
____________________________________________________________
consensus TCCAGGAGGACCATAGCAAAGAACACCNTTAGGTGGGTCAATTCCGAGCTTCACAAACTT
. : . : . : . : . : . :
JMFF011A13+ TTCTGGGTGGAGCATTGGCAGTTCAACCACCTCTCGCATCTTTTCAATTTGTTCCTTGCA
JMFF042L18+ TTGGCAGTTCAACCACCTCTCGCATCTNTTCAATTTGTTCCTTGCA
____________________________________________________________
consensus TTCTGGGTGGAGCATTGGCAGTTCAACCACCTCTCGCATCTTTTCAATTTGTTCCTTGCA
. : . : . : . : . : . :
JMFF011A13+ TCCACCAACATCATTGTAGGTCACATCAGGCTTTTCCTCAACTGTCATCATGGTGACACT
JMFF042L18+ TCCACCAACATCATNGTAGGTCACATCAGGCTTTTCCTCAACTGTCATCATGGTGACACT
____________________________________________________________
consensus TCCACCAACATCATTGTAGGTCACATCAGGCTTTTCCTCAACTGTCATCATGGTGACACT
. : . : . : . : . : . :
JMFF011A13+ TGGATCAATTTTGGGAGGCAAAGGAATCTGGATTTGATATTTATTCCGATCAACTCCAAC
JMFF042L18+ TGGATCAATTTTGGGAGGCAAAGGAATCTGGATNTGATATTTATTCCGATCAACTCCAAC
JMSF009B23+ TCCGATCAACTCCAAC
JMFF005M09+ TGATATTTATTCCGATCAACTCCAAC
____________________________________________________________
consensus TGGATCAATTTTGGGAGGCAAAGGAATCTGGATTTGATATTTATTCCGATCAACTCCAAC
. : . : . : . : . : . :
JMFF011A13+ TCGCATGCCCTCTTCAATATCAGTTGGTGAAACTTTGTCACCCAATCCAACAACAAACTT
JMFF042L18+ TCGCATGCCCTCTTCAATATCAGTTGGTGAAACTTTGTCACCCAATCCAACAACAAACTT
JMSF009B23+ TCGCATGCCCTCTTCAATATCAGTTGGTGAAACTTTGTCACCCAATCCAACAACAAACTT
JMFF005M09+ TCGCATGCCCTCTTCAATATCAGTTGGTGAAACTTTGTCACCCAATCCAACAACAAACTT
____________________________________________________________
consensus TCGCATGCCCTCTTCAATATCAGTTGGTGAAACTTTGTCACCCAATCCAACAACAAACTT
. : . : . : . : . : . :
JMFF011A13+ TGCTATTTGCTTCACATTTATCACATATTTTGCATCTTCAGTATTAGGACTGATTATTTT
JMFF042L18+ TGCTATTTGCTTCACATTTATCACATATTTTGCATCTTCAGTATTAGGACTGATTATTTT
JMSF009B23+ TGCTATTTGCTTCACATTTATCACATATTTTGCATCTTCAGTATTAGGACTGATTATTTT
JMFF005M09+ TGCTATTTGCTTCACATTTATCACATATTTTGCATCTTCAGTATTAGGACTGATTATTTT
____________________________________________________________
consensus TGCTATTTGCTTCACATTTATCACATATTTTGCATCTTCAGTATTAGGACTGATTATTTT
. : . : . : . : . : . :
JMFF011A13+ TGTACATCTTGCCACCTGAAGGGGTTGCTCCTCCTGCATCATTTGCTTATCAGAAACCAA
JMFF042L18+ TGTACATCTTGCCACCTGAAGGGGTTGCTCCTCCTGCATCATTTGCTTATCAGAAACCAA
JMSF009B23+ TGTACATCTTGCCACCTGAAGGGGTTGCTCCTCCTGCATCATTTGCTTATCAGAAACCAA
JMFF005M09+ TGTACATCTTGCCACCTGAAGGGGTTGCTCCTCCTGCATCATTTGCTTATCAGAAACCAA
____________________________________________________________
consensus TGTACATCTTGCCACCTGAAGGGGTTGCTCCTCCTGCATCATTTGCTTATCAGAAACCAA
. : . : . : . : . : . :
JMFF011A13+ ATCCCATTGGCTTGGTGCAGCTAAGCCAGTGTCAGATTCCTTAATACCACATAAAT
JMFF042L18+ ATCCCATTGGCTTGGTGCAGCTAAGCCAGTGTCAGATTCCTTAATACCACATAAATCATT
JMSF009B23+ ATCCCATTGGCTTGGTGCAGCTAAGCCAGTGTCAGATTCCTTAATACCACATAAATCATT
JMFF005M09+ ATCCCATTGGCTTGGTGCAGCTAAGCCAGTGTCAGATTCCTTAATACCACATAAATCATT
____________________________________________________________
consensus ATCCCATTGGCTTGGTGCAGCTAAGCCAGTGTCAGATTCCTTAATACCACATAAATCATT
. : . : . : . : . : . :
JMFF042L18+ AATCTTTTTAGCCATTTCCTTGATTTCCTTTTCAGCTTTCTTTATGCTTGTTGAATAAGG
JMSF009B23+ AATCTTTTTAGC
JMFF005M09+ AATCTTTTTAGCCATTTCCTTGATTTCCTTTTCAGCTTTCTTTATGCTTGTTGAATAAGG
JMSF011A09+ TCTTTATGCTTGTTGAATAAGG
____________________________________________________________
consensus AATCTTTTTAGCCATTTCCTTGATTTCCTTTTCAGCTTTCTTTATGCTTGTTGAATAAGG
. : . : . : . : . : . :
JMFF042L18+ TCCCAGACCATATGTCTTAAGGAGAGCAATATCGTCCTCATCGAGCGGCCTAGGGTTCTT
JMFF005M09+ TCCCAGACCATATGTCTTAAGGAGAGCAATATCGTCCTCATCGAGCGGCCTAGGGTTCTT
JMSF011A09+ TCCCAGACCATATGTCTTAAGGAGAGCAATATCGTCCTCATCGAGCGGCCTAGGGTTCTT
____________________________________________________________
consensus TCCCAGACCATATGTCTTAAGGAGAGCAATATCGTCCTCATCGAGCGGCCTAGGGTTCTT
. : . : . : . : . : . :
JMFF042L18+ CTCGTCCTTGATCTCATCCTCCACATCCCGGGCGGGTGCCATGCTTCCGAGATTCCTTTC
JMFF005M09+ CTCGTCCTTGATCTCATCCTCCACATCCCGGGCGGGTGCCATGCTTCCGAGATTCCTTTC
JMSF011A09+ CTCGTCCTTGATCTCATCCTCCACATCCCGGGCGGGTGCCATGCTTCCGAGATTCCTTTC
____________________________________________________________
consensus CTCGTCCTTGATCTCATCCTCCACATCCCGGGCGGGTGCCATGCTTCCGAGATTCCTTTC
. : . : . : . : . : . :
JMFF042L18+ TTCTTCTTCTCTTCTTCCTCCTAACAATCGCAGAGTTGAGAAAGTTTGGAGAACAA
JMFF005M09+ TTCTTCTTCTCTTCTTCCTCCTAACAATCGCAGAGTTGAGAAAGTTTGGAGAACAA
JMSF011A09+ TTCTTCTTCTCTTCTTCCTCCTAACAATCGCAGAGTTGAGAAAGTTTGGAGAACAAGCCC
____________________________________________________________
consensus TTCTTCTTCTCTTCTTCCTCCTAACAATCGCAGAGTTGAGAAAGTTTGGAGAACAAGCCC