Contig 013267:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042I03Sequence657013267 (3)ref|XP_009797960.1|2e-121PREDICTED: ALBINO3-like protein 1, chloroplastic [Nicotiana sylvestris]450012408 (2)
JMFS143C05Sequence626013267 (3)ref|XP_009797960.1|3e-80PREDICTED: ALBINO3-like protein 1, chloroplastic [Nicotiana sylvestris]
JMSF010L08Sequence367013267 (3)ref|XP_011086703.1|9e-14PREDICTED: ALBINO3-like protein 1, chloroplastic [Sesamum indicum]769012408 (2)ref|XP_009797960.1|6e-04PREDICTED: ALBINO3-like protein 1, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF042I03+                   ATTGGCAACATTAGAAAGGGCTCTGTACAGCCCAATCCATATAGGAATAGTA
                      ____________________________________________________________
consensus                     ATTGGCAACATTAGAAAGGGCTCTGTACAGCCCAATCCATATAGGAATAGTA
 
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JMFF042I03+           GCAAGCGTTGGCAGACACCCTGCCAATGGGTTTATGCCAGCCAATTTATATAAGCGGGCA
                      ____________________________________________________________
consensus             GCAAGCGTTGGCAGACACCCTGCCAATGGGTTTATGCCAGCCAATTTATATAAGCGGGCA
 
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JMFF042I03+           GTTTCGAGTTGAACTTTCTCCTGATCACCACCATAATGTTCCTGAATAGCCTTTATTTGG
                      ____________________________________________________________
consensus             GTTTCGAGTTGAACTTTCTCCTGATCACCACCATAATGTTCCTGAATAGCCTTTATTTGG
 
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JMFF042I03+           GGAGCCAAAGATCTCATTGCCATTGCAGATTCCACCTGCTTCTTTGTCAGAGGGAAAGTG
JMFS143C05+                      TCTCATTGCCATTGCAGATTCCACCTGCTTCTTTGTCAGAGGGAAAGTG
                      ____________________________________________________________
consensus             GGAGCCAAAGATCTCATTGCCATTGCAGATTCCACCTGCTTCTTTGTCAGAGGGAAAGTG
 
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JMFF042I03+           ACAGCCTTTACTAGTACAGTAAGCAGTATAATTGCAAAACCATAAGCATAGGGCACATGA
JMFS143C05+           ACAGCCTTTACTAGTACAGTAAGCAGTATAATTGCAAAACCATAAGCATAGGGCACATGA
                      ____________________________________________________________
consensus             ACAGCCTTTACTAGTACAGTAAGCAGTATAATTGCAAAACCATAAGCATAGGGCACATGA
 
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JMFF042I03+           AGAGTAGAAAGTCCATCCTTCAGCACCTTCAAAACTGCCTCCATCGTATTGGCGATTCCA
JMFS143C05+           AGAGTAGAAAGTCCATCCTTCAGCACCTTCAAAACTGCCTCCATCGTATTGGCGATTCCA
                      ____________________________________________________________
consensus             AGAGTAGAAAGTCCATCCTTCAGCACCTTCAAAACTGCCTCCATCGTATTGGCGATTCCA
 
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JMFF042I03+           GATAGCCAGTCACTATTCTGTTTAGCAGTTTCTGCAGTAGCAGCAGCTGAAACCGTATCG
JMFS143C05+           GATAGCCAGTCACTATTCTGTTTAGCAGTTTCTGCAGTAGCAGCAGCTGAAACCGTATCG
                      ____________________________________________________________
consensus             GATAGCCAGTCACTATTCTGTTTAGCAGTTTCTGCAGTAGCAGCAGCTGAAACCGTATCG
 
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JMFF042I03+           GGGGAACCCGAAACCGCAGCATCAGCGATAGTATACAAGACCCCCTCAACTCGAGCAAAT
JMFS143C05+           GGGGAACCCGAAACCGCAGCATCAGCGATAGTATACAAGACCCCCTCAACTCGAGCAAAT
                      ____________________________________________________________
consensus             GGGGAACCCGAAACCGCAGCATCAGCGATAGTATACAAGACCCCCTCAACTCGAGCAAAT
 
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JMFF042I03+           AAGTTCTTCATTACTACCTCAGCATCTTCAGGGTCTGGAAATGGAACCTGACCCAGTCCG
JMFS143C05+           AAGTTCTTCATTACTACCTCAGCATCTTCAGGGTCTGGAAATGGAACCTGACCCAGTCCG
JMSF010L08+                                                                CAGTCCG
                      ____________________________________________________________
consensus             AAGTTCTTCATTACTACCTCAGCATCTTCAGGGTCTGGAAATGGAACCTGACCCAGTCCG
 
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JMFF042I03+           AACCGTGCCACGCCCAGCGTGCCCCGTAGGAAGGGCTTGTGAGGTGGAAGATTTCGGAAA
JMFS143C05+           AACCGTGCCACGCCCAGCGTGCCCCGTAGGAAGGGCTTGTGAGGTGGAAGATTTCGGAAA
JMSF010L08+           AACCGTGCCACGCCCAGCGTGCCCCGTAGGAAGGGCTTGTGAGGTGGAAGATTTCGGAAA
                      ____________________________________________________________
consensus             AACCGTGCCACGCCCAGCGTGCCCCGTAGGAAGGGCTTGTGAGGTGGAAGATTTCGGAAA
 
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JMFF042I03+           TGGGTCCGGGTGGGAATTGGGGCTAGGGTTCTAGTTTGGCATGGAAATGGTGATAGGATT
JMFS143C05+           TGGGTCCGGGTGGGAATTGGGGCTAGGGTTCTAGTTTGGCATGGAAATGGTGATAGGATT
JMSF010L08+           TGGGTCCGGGTGGGAATTGGGGCTAGGGTTCTAGTTTGGCATGGAAATGGTGATAGGATT
                      ____________________________________________________________
consensus             TGGGTCCGGGTGGGAATTGGGGCTAGGGTTCTAGTTTGGCATGGAAATGGTGATAGGATT
 
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JMFF042I03+           ATCTT                                                       
JMFS143C05+           ATCTTGGGTCCGAGTGAGAGCACAAAAGTTCCCATTTCTAGTGTAATTTGATTTGAATCG
JMSF010L08+           ATCTTGGGTCCGAGTGAGAGCACAAAAGTTCCCATTTCTAGTGTAATTTGATTTGAATCG
                      ____________________________________________________________
consensus             ATCTTGGGTCCGAGTGAGAGCACAAAAGTTCCCATTTCTAGTGTAATTTGATTTGAATCG
 
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JMFS143C05+           GATTCTTTTGTCTTTCGAGCTGTAAAACCCTAAATATTCCCGGAATGAATTGGATTCGAA
JMSF010L08+           GATTCTTTTGTCTTTCGAGCTGTAAAACCCTAAATATTCCCGGAATGAATTGGATTCGAA
                      ____________________________________________________________
consensus             GATTCTTTTGTCTTTCGAGCTGTAAAACCCTAAATATTCCCGGAATGAATTGGATTCGAA
 
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JMFS143C05+           CAAGAAACTGCTTCTTCTCCCGAAATTTGACGAAGGC                       
JMSF010L08+           CAAGAAACTGCTTCTTCTCCCGAAATTTGACGAAGGCTAAGACGAATGTGGAATTTAGTC
                      ____________________________________________________________
consensus             CAAGAAACTGCTTCTTCTCCCGAAATTTGACGAAGGCTAAGACGAATGTGGAATTTAGTC
 
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JMSF010L08+           CAGAAGTCGCGGAGTCAAAGGGAAAGAGAGGAAAATCTTTTTAGTTCATCTGTGAAAATC
                      ____________________________________________________________
consensus             CAGAAGTCGCGGAGTCAAAGGGAAAGAGAGGAAAATCTTTTTAGTTCATCTGTGAAAATC