Contig 013263:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF027K23-                                                          AATGTGCCATGA
                      ____________________________________________________________
consensus                                                             AATGTGCCATGA
 
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rJMSF027K23-          ATATCTCCATCTTACAATTCTGGATGTATGGTATAACAA-GTGATTTTGTGTTCAGGGAA
rJMSF010D03-                        CAATTCTGGATGTATGGTATAACAAGGTGATTTTGTGTTCAGGGAA
                      ____________________________________________________________
consensus             ATATCTCCATCTTACAATTCTGGATGTATGGTATAACAAGGTGATTTTGTGTTCAGGGAA
 
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rJMSF027K23-          GGGAAGACAGCTAAACTACTATAGTGTGCTAGACAGAACATGATCATCAATTTCATCAAA
rJMSF010D03-          GGGAAGACAGCTAAACTACTATAGTGTGCTAGACAGAACATGATCATCAATTTCATCAAA
                      ____________________________________________________________
consensus             GGGAAGACAGCTAAACTACTATAGTGTGCTAGACAGAACATGATCATCAATTTCATCAAA
 
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rJMSF027K23-          CGCTCAGACTAAGGTTAAAACCATCACATATTTACGAGTAACCTTAAATGCCACTGGGCA
rJMSF010D03-          CGCTCAGACTAAGGTTAAAACCATCACATATTTACGAGTAACCTTAAATGCCACTGGGCA
                      ____________________________________________________________
consensus             CGCTCAGACTAAGGTTAAAACCATCACATATTTACGAGTAACCTTAAATGCCACTGGGCA
 
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rJMSF027K23-          GTGATCCTTTTCAAAGCCTGCACACAATGAGGTTGTTGGATTATAGAGGTTTGTCCTGGC
rJMSF010D03-          GTGATCCTTTTCAAAGCCTGCACACAATGAGGTTGTTGGATTATAGAGGTTTGTCCTGGC
                      ____________________________________________________________
consensus             GTGATCCTTTTCAAAGCCTGCACACAATGAGGTTGTTGGATTATAGAGGTTTGTCCTGGC
 
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rJMSF027K23-          TTGGTGATTGTAGATTTCCTCGATTGAGAAACCACGCCCACCCGCCCAAGTTCTAAGCAA
rJMSF010D03-          TTGGTGATTGTAGATTTCCTCGATTGAGAAACCACGCCCACCCGCCCAAGTTCTAAGCAA
                      ____________________________________________________________
consensus             TTGGTGATTGTAGATTTCCTCGATTGAGAAACCACGCCCACCCGCCCAAGTTCTAAGCAA
 
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rJMSF027K23-          CTTGGAGCATATCATATCAAATTCTTTTGTGCGTTCCGGCCAAATATGGTGTAGTATGCA
rJMSF010D03-          CTTGGAGCATATCATATCAAATTCTTTTGTGCGTTCCGGCCAAATATGGTGTAGTATGCA
                      ____________________________________________________________
consensus             CTTGGAGCATATCATATCAAATTCTTTTGTGCGTTCCGGCCAAATATGGTGTAGTATGCA
 
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rJMSF027K23-          CTCCCCGACTCAATGCTTGAGCCAGTAGTTGCGTAGTTGAGACATGTGTAACAATATCTC
rJMSF010D03-          CTCCCCGACTCAATGCTTGAGCCAGTAGTTGCGTAGTTGAGACATGTGTAACAATATCTC
                      ____________________________________________________________
consensus             CTCCCCGACTCAATGCTTGAGCCAGTAGTTGCGTAGTTGAGACATGTGTAACAATATCTC
 
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rJMSF027K23-          GTCTCGGCCTTGGTGGGTTACACTGCTCGTCATAATCCAAGGCGGAGTTGTTTGGAAGAA
rJMSF010D03-          GTCTCGGCCTTGGTGGGTTACACTGCTCGTCATAATCCAAGGCGGAGTTGTTTGGAAGAA
                      ____________________________________________________________
consensus             GTCTCGGCCTTGGTGGGTTACACTGCTCGTCATAATCCAAGGCGGAGTTGTTTGGAAGAA
 
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rJMSF027K23-          GTTTTGTATTAACTCTTGAAAATCTTGCACATTCTCTTCAGGTCTTTTTCCTCCATTCTT
rJMSF010D03-          GTTTTGTATTAACTCTTGAAAATCTTGCACATTCTCTTCAGGTCTTTTTCCTCCATTCTT
                      ____________________________________________________________
consensus             GTTTTGTATTAACTCTTGAAAATCTTGCACATTCTCTTCAGGTCTTTTTCCTCCATTCTT
 
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rJMSF027K23-          AGCCTTTTTCCGCTTATCACATTTCGTGAAGATTATTGTCATTGGAATCTGATTTTGTCC
rJMSF010D03-          AGCCTTTTTCCGCTTATCACATTTCGTGAAGATTATTGTCATTGGAATCTGATTTTGTCC
                      ____________________________________________________________
consensus             AGCCTTTTTCCGCTTATCACATTTCGTGAAGATTATTGTCATTGGAATCTGATTTTGTCC
 
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rJMSF027K23-          AAGCCAGCTTGCATATTCAAGGTCAATCGGTTTCGCAGGGATGCTAGCATCTATGAGAAG
rJMSF010D03-          AAGCCAGCTTGCATATTCAAGGTCAATCGGTTTCGCAGGGATGCTAGCATCTATGAGAAG
JMSF027K23+                                          TTCGCAGGGATGCTAGCATCTATGAGAAG
                      ____________________________________________________________
consensus             AAGCCAGCTTGCATATTCAAGGTCAATCGGTTTCGCAGGGATGCTAGCATCTATGAGAAG
 
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rJMSF027K23-          GAATACTGAGACG                                               
rJMSF010D03-          GAATACTGAGACGAGAGTTGATCGGTTCAAAAAATAATCTTTCGTAAACTTGTCCCAATC
JMSF027K23+           GAATACTGAGACGAGAGTTGATCGGTTCAAAAAATAATCTTTCGTAAACTTGTCCCAATC
                      ____________________________________________________________
consensus             GAATACTGAGACGAGAGTTGATCGGTTCAAAAAATAATCTTTCGTAAACTTGTCCCAATC
 
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rJMSF010D03-          TGTCCTA                                                     
JMSF027K23+           TGTCCTAAGTTCTTGTGGTGCTGATGCATACCCGTATCCAGGCAAATCAACAAGATACCA
                      ____________________________________________________________
consensus             TGTCCTAAGTTCTTGTGGTGCTGATGCATACCCGTATCCAGGCAAATCAACAAGATACCA
 
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JMSF027K23+           GTTACCGTTGATCCTGAAATGGTTGATGCATTGTGTCTTGCCAGGTTTCTTGGAAGTAAG
                      ____________________________________________________________
consensus             GTTACCGTTGATCCTGAAATGGTTGATGCATTGTGTCTTGCCAGGTTTCTTGGAAGTAAG
 
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JMSF027K23+           AGCAAGCTTTTTACGCCTAACCAGAGAGTTAAGCAGCGAAGATTTCCCCACATTAGACCT
                      ____________________________________________________________
consensus             AGCAAGCTTTTTACGCCTAACCAGAGAGTTAAGCAGCGAAGATTTCCCCACATTAGACCT
 
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JMSF027K23+           CCCAACGAGCGCGAACTCCGGCAACCCGTCGCCGGGGCAGTCTTCGGTATTCACACTGCT
                      ____________________________________________________________
consensus             CCCAACGAGCGCGAACTCCGGCAACCCGTCGCCGGGGCAGTCTTCGGTATTCACACTGCT
 
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JMSF027K23+           CTTCACAAACTCCGCCTGCCCCACCTGAGCATCCCCGGCATACTTGCTAAGCACAATGTT
                      ____________________________________________________________
consensus             CTTCACAAACTCCGCCTGCCCCACCTGAGCATCCCCGGCATACTTGCTAAGCACAATGTT
 
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JMSF027K23+           AGAGCCCTTGAGGATCCGGGCACTCAACGGCGTCGTTTCGGATGAGACATCCGTTTCCGG
JMSF010D03+                                                                     GG
                      ____________________________________________________________
consensus             AGAGCCCTTGAGGATCCGGGCACTCAACGGCGTCGTTTCGGATGAGACATCCGTTTCCGG
 
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JMSF027K23+           CGGAACGAAGAGTTTTTCGAGGGAGATTTCGACCGGGCCGGGCTCATCCGGGCTGTTCAA
JMSF010D03+           CGGAACGAAGAGTTTTTCGAGGGAGATTTCGACCGGGCCGGGCTCATCCGGGCTGTTCAA
                      ____________________________________________________________
consensus             CGGAACGAAGAGTTTTTCGAGGGAGATTTCGACCGGGCCGGGCTCATCCGGGCTGTTCAA
 
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JMSF027K23+           CTGTGGGTTTTGGAGGAGAGTAGCGGTAGAGAAGTGGGCGACCGGGCCGGATATGGGCTT
JMSF010D03+           CTGTGGGTTTTGGAGGAGAGTAGCGGTAGAGAAGTGGGCGACCGGGCCGGATATGGGCTT
                      ____________________________________________________________
consensus             CTGTGGGTTTTGGAGGAGAGTAGCGGTAGAGAAGTGGGCGACCGGGCCGGATATGGGCTT
 
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JMSF027K23+           GGATGAGAGGGTGGAGGTGAAAAGGAGTTTGGGTTTGGGAGCGAGTGAGGAGAAATGAAA
JMSF010D03+           GGATGAGAGGGTTGAGGTGAAAAGGAGTTTGGGTTTGGGAGCGAGTGAGGAGAAATGAAA
                      ____________________________________________________________
consensus             GGATGAGAGGGTTGAGGTGAAAAGGAGTTTGGGTTTGGGAGCGAGTGAGGAGAAATGAAA
 
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JMSF027K23+           ATGGAGCTTTGGGAGATAATTGATGAACATGGGGCCGGGCTCGGG               
JMSF010D03+           ATGGAGCTTTGGGAGATAATTGATGAACATGGGGCCGGGCTCGGGTGGAACTGAGTGAAG
                      ____________________________________________________________
consensus             ATGGAGCTTTGGGAGATAATTGATGAACATGGGGCCGGGCTCGGGTGGAACTGAGTGAAG
 
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JMSF010D03+           TTGCAGAAGAGGGTTTATGAGGTTGAAGAGTTGAAGCGGAGAAGAAGACCGAAATTCCTC
                      ____________________________________________________________
consensus             TTGCAGAAGAGGGTTTATGAGGTTGAAGAGTTGAAGCGGAGAAGAAGACCGAAATTCCTC