Contig 013260:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF039I07+                                                              CATTAGAAT
                      ____________________________________________________________
consensus                                                                CATTAGAAT
 
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JMSF039I07+           TGTATGATGGGTCTTCTTCTGGTGTAGAGTCATCGGAGAAAACTGTTGCGATTGAAAGAC
                      ____________________________________________________________
consensus             TGTATGATGGGTCTTCTTCTGGTGTAGAGTCATCGGAGAAAACTGTTGCGATTGAAAGAC
 
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JMSF039I07+           ACAACATCGGCCCAGAGATTTTCCGCATTTCTTTGGCCAGAGGCTTGAAAGGAAACCATC
                      ____________________________________________________________
consensus             ACAACATCGGCCCAGAGATTTTCCGCATTTCTTTGGCCAGAGGCTTGAAAGGAAACCATC
 
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JMSF039I07+           TCTGCAACCACTTAAATGGTGGATAACATATAACTTGTAATGCCTGAAGACCACGCCAAA
                      ____________________________________________________________
consensus             TCTGCAACCACTTAAATGGTGGATAACATATAACTTGTAATGCCTGAAGACCACGCCAAA
 
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JMSF039I07+           TGAGAGGACACTTTGACGTGGAGAACCTCCTCACAATTTCAAGTGCAGCAGTGGTAATTA
                      ____________________________________________________________
consensus             TGAGAGGACACTTTGACGTGGAGAACCTCCTCACAATTTCAAGTGCAGCAGTGGTAATTA
 
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JMSF039I07+           AAAACTCAACAACATTACCCACAGCTCCACTAGAATGCACACATTTCTTCACCGATGTAA
                      ____________________________________________________________
consensus             AAAACTCAACAACATTACCCACAGCTCCACTAGAATGCACACATTTCTTCACCGATGTAA
 
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JMSF039I07+           TACAGTTCAGAGCCTTTGCTGTGAAGTGCTGAGAGGCCGTAGCAACTAAATAACTTCTCG
                      ____________________________________________________________
consensus             TACAGTTCAGAGCCTTTGCTGTGAAGTGCTGAGAGGCCGTAGCAACTAAATAACTTCTCG
 
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JMSF039I07+           GTAACTTATTTTTACTGCTCATAATCTTTGCATTCGACCTTTGTGTCGGGTGTGAGTACG
JMFF006J14+           GTAACTTATTTTTACTGCTCATAATCTTTGCATTCGACCTTTGTGTCGGGTGTGAGTACG
                      ____________________________________________________________
consensus             GTAACTTATTTTTACTGCTCATAATCTTTGCATTCGACCTTTGTGTCGGGTGTGAGTACG
 
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JMSF039I07+           ATTCAGCCGATTCGTCTCCCATCTCTCCGTCCATTAAAATGATTATCAACAAAAGCTTAA
JMFF006J14+           ATTCAGCCGATTCGTCTCCCATCTCTCCGTCCATTAAAATGATTATCAACAAAAGCTTAA
                      ____________________________________________________________
consensus             ATTCAGCCGATTCGTCTCCCATCTCTCCGTCCATTAAAATGATTATCAACAAAAGCTTAA
 
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JMSF039I07+           CAAATCCTTATATAGGTCGAGGATTCCGTCACTTCATTCAAAAATTGGCATTACATAACA
JMFF006J14+           CAAATCCTTATATAGGTCGAGGATTCCGTCACTTCATTCAAAAATTGGCATTACATAACA
                      ____________________________________________________________
consensus             CAAATCCTTATATAGGTCGAGGATTCCGTCACTTCATTCAAAAATTGGCATTACATAACA
 
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JMSF039I07+           TCACTTGATGTATGTGCAATCTTTTGAATGATTCTTTTCCCCTTCCGGTTTTGTGATTGG
JMFF006J14+           TCACTTGATGTATGTGCAATCTTTTGAATGATTCTTTTCCCCTTCCGGTTTTGTGATTGG
                      ____________________________________________________________
consensus             TCACTTGATGTATGTGCAATCTTTTGAATGATTCTTTTCCCCTTCCGGTTTTGTGATTGG
 
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JMSF039I07+           TGAAACAAAAACGTTTTGATTGGAAGCTATATGCCTTGCTAGGGTTTAAAAGAGGAGAGA
JMFF006J14+           TGAAACAAAAACGTTTTGATTGGAAGCTGTATGCCTTGCTAGGGTTTAAAAGAGGAGAGA
                      ____________________________________________________________
consensus             TGAAACAAAAACGTTTTGATTGGAAGCTGTATGCCTTGCTAGGGTTTAAAAGAGGAGAGA
 
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JMSF039I07+           GGATAAGTCAGCGGCGTTAGCTTCCTTTCCGATTTCCGA                     
JMFF006J14+           GGATAAGTCAGCGGCGTTAGCTTCCTTTCCGATTTCCGATATAATTGCTATACTTGGCTT
JMSF009M22+                                           TTTCCGATATAATTGCTATACTTGGCTT
                      ____________________________________________________________
consensus             GGATAAGTCAGCGGCGTTAGCTTCCTTTCCGATTTCCGATATAATTGCTATACTTGGCTT
 
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JMFF006J14+           GTGGGGAAGGCGATTGATGATCGATGAAAGCGACGGTTGATGGAGGGAAAATGCACGTGC
JMSF009M22+           GTGGGGAAGGCGATTGATGATCGATGAAAGCGACGGTTGATGGAGGGAAAATGCACGTGC
                      ____________________________________________________________
consensus             GTGGGGAAGGCGATTGATGATCGATGAAAGCGACGGTTGATGGAGGGAAAATGCACGTGC
 
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JMFF006J14+           TTCTCCTACGCGCCGGTCCACGTTTATCGCTGTGAATTGTGATCCTCCCAGAAGATACTG
JMSF009M22+           TTCTCCTACGCGCCGGTCCACGTTTATCGCTGTGAATTGTGATCCTCCCAGAAGATACTG
                      ____________________________________________________________
consensus             TTCTCCTACGCGCCGGTCCACGTTTATCGCTGTGAATTGTGATCCTCCCAGAAGATACTG
 
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JMFF006J14+           AATCTTCTTCAATTCTTCATCCACCCATTAGGTTTTGGAGAAGACAGAATCAGGGAAC  
JMSF009M22+           AATCTTCTTCAATTCTTCATCCACCCATTAGGTTTTGGAGAAGACAGAATCAGGGAACCA
                      ____________________________________________________________
consensus             AATCTTCTTCAATTCTTCATCCACCCATTAGGTTTTGGAGAAGACAGAATCAGGGAACCA