| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF029C05 | Sequence | 556 | 013258 (9) | gb|AID67112.1| | 2e-51 | YAB5 protein [Solanum sisymbriifolium] | 723 | 013258 (9) | gb|AID67113.1| | 3e-72 | YAB5 protein [Solanum aethiopicum] |
| JMFF029C06 | Sequence | 237 | 013258 (9) | ref|XP_003542627.1| | 4e-05 | PREDICTED: axial regulator YABBY 5-like [Glycine max] gb|KHN22110.1| Axial regul | 517 | 013258 (9) | ref|XP_002285328.1| | 1e-46 | PREDICTED: axial regulator YABBY 5 isoform X1 [Vitis vinifera] emb|CBI28225.3| u |
| JMFN036M23 | Sequence | 596 | 013258 (9) | gb|AID67112.1| | 1e-50 | YAB5 protein [Solanum sisymbriifolium] | |||||
| JMSF009K10 | Sequence | 436 | 013258 (9) | ref|XP_003542627.1| | 1e-25 | PREDICTED: axial regulator YABBY 5-like [Glycine max] gb|KHN22110.1| Axial regul | 664 | 013258 (9) | gb|AID67113.1| | 6e-65 | YAB5 protein [Solanum aethiopicum] |
| JMSF022I09 | Sequence | 678 | 013258 (9) | gb|AID67112.1| | 1e-85 | YAB5 protein [Solanum sisymbriifolium] | 789 | 013258 (9) | ref|XP_002285328.1| | 8e-87 | PREDICTED: axial regulator YABBY 5 isoform X1 [Vitis vinifera] emb|CBI28225.3| u |
This contig is upended
. : . : . : . : . : . :
rJMSF009K10- GTTGATATATTT
rJMFF029C06- TATATTT
rJMFF029C05- CATTAAAATTGAAATATTATAAACAACAGACAATCATAGCTTGTTGATATATTT
rJMSF022I09- GTTGATATATTT
____________________________________________________________
consensus CATTAAAATTGAAATATTATAAACAACAGACAATCATAGCTTGTTGATATATTT
. : . : . : . : . : . :
rJMSF009K10- CACAATATAATCAATAGCTCAACTCTTTGTCTTAATTGTTTCAAAGTACAATAATAACGG
rJMFF029C06- CAAAATATAATCAATAGCTCAACTCTTTGTCTTAATTGTTTCAAAGTACAATAATAACGG
rJMFF029C05- CACAATATAATCAATAGCTCAACTCTTTGTCTTAATTGTTTCAAAGTACAATAATAACGG
rJMSF022I09- CACAATATAATCAATAGCTCAACTCTTTGTCTTAATTGTTTCAAAGTACAATAATAACGG
____________________________________________________________
consensus CACAATATAATCAATAGCTCAACTCTTTGTCTTAATTGTTTCAAAGTACAATAATAACGG
. : . : . : . : . : . :
rJMSF009K10- CTATATATAAAAAAACATACATATTTAGGGCCACTGTTATCATCAACCATGAGAGAATAA
rJMFF029C06- CTATATATAAAAAAACATACATATTTAGGGCCACTGTTATCATCAACCATGAGAGAATAA
rJMFF029C05- CTATATATAAAAAAACATACATATTTAGGGCCACTGTTATCATCAACCATGAGAGAATAA
rJMSF022I09- CTATATATAAAAAAACATACATATTTAGGGCCACTGTTATCATCAACCATGAGAGAATAA
____________________________________________________________
consensus CTATATATAAAAAAACATACATATTTAGGGCCACTGTTATCATCAACCATGAGAGAATAA
. : . : . : . : . : . :
rJMSF009K10- GTTATACAATTCAAGGAGTTTTTATGTCTTCAACTGTTCAATACTGCAGCCCTTTGCAAA
rJMFF029C06- GTTATACAATTCAAGGAGTTTTTATGTCTTCAACTGTTCAATACTGCAGCCCTTTGCAAA
rJMFF029C05- GTTATACAATTCAAGGAGTTTTTATGTCTTCAACTGTTCAATACTGCAGCCCTTTGCAAA
rJMSF022I09- GTTATACAATTCAAGGAGTTTTTATGTCTTCAACTGTTCAATACTGCAGCCCTTTGCAAA
____________________________________________________________
consensus GTTATACAATTCAAGGAGTTTTTATGTCTTCAACTGTTCAATACTGCAGCCCTTTGCAAA
. : . : . : . : . : . :
rJMSF009K10- GACGCTTTCCAGTTCCCTCAGAAACCCCAAGCTTAGGTTGATTGTTGTTGGAATCCAGCA
rJMFF029C06- GACGCTTTCCAGTTCCCTCAGAAACCCCAAGCTTAGGTTGATTGTTGTTGGAATCCAACA
rJMFF029C05- GACGCTTTCCAGTTCCCTCAGAAACCCCAAGCTTAGGTTGATTGTTGTTGGAATCCAGCA
rJMSF022I09- GACGCTTTCCAGTTCCCTCAGAAACCCCAAGCTTAGGTTGATTGTTGTTGGAATCCAGCA
JMSF022I09+ TGTTGGAATCCAGCA
____________________________________________________________
consensus GACGCTTTCCAGTTCCCTCAGAAACCCCAAGCTTAGGTTGATTGTTGTTGGAATCCAGCA
. : . : . : . : . : . :
rJMSF009K10- TGAGACCAAAGTGAATGTGAGGGAAGTGTGCCCAATTTTTGGCAGCAGTACTAAATGCTT
rJMFF029C06- TGANACCAAAGTGAATGTGAGGGAAGTGTGCCCAATTTTTGGCAGCAGTACTAAATGCTT
rJMFF029C05- TGAGACCAAAGTGAATGTGAGGGAAGTGTGCCCAATTTTTGGCAGCAGTACTAAATGCTT
rJMSF022I09- TGAGACCAAAGTGAATGTGAGGGAAGTGTGCCCAATTTTTGGCAGCAGTACTAAATGCTT
JMSF022I09+ TGAGACCAAAGTGAATGTGAGGGAAGTGTGCCCAATTTTTGGCAGCAGTACTAAATGCTT
____________________________________________________________
consensus TGAGACCAAAGTGAATGTGAGGGAAGTGTGCCCAATTTTTGGCAGCAGTACTAAATGCTT
. : . : . : . : . : . :
rJMSF009K10- CCCTGTGGCTGATATCTGGGTTATTAGCCTTGATCCTCTGAATCTCTTCTTTTATGAATT
rJMFF029C06- CCCTGTGGCTGATATCTGGGTTATTAGCCTTGATCCTCTGAATCTCTTCTTTTATGAATT
rJMFF029C05- CCCTGTGGCTGATATCTGGGTTATTAGCCTTGATCCTCTGAATCTCTTCTTTTATGAATT
rJMSF022I09- CCCTGTGGCTGATATCTGGGTTATTAGCCTTGATCCTCTGAATCTCTTCTTTTATGAATT
JMSF022I09+ CCCTGTGGCTGATATCTGGGTTATTAGCCTTGATCCTCTGAATCTCTTCTTTTATGAATT
JMFF029C05+ TTATGAATT
JMFN036M23+ TGAATT
____________________________________________________________
consensus CCCTGTGGCTGATATCTGGGTTATTAGCCTTGATCCTCTGAATCTCTTCTTTTATGAATT
. : . : . : . : . : . :
rJMSF009K10- GGTTATATGCAGAAGGCACTCTAGCCCTCTTCTCGGGAGGTCGGTTCACAATTCTTTCTT
rJMFF029C06- GGTTATATGCAGAAGGCACTCTAGCCCTCTTCTCGGGAGGTCGGTTCACAATTCTTTCTT
rJMFF029C05- GGTTATATGCAGAAGGCACTCTAGCCCTCTTCTCGGGAGGTCGGTTCACAATTCTTTCTT
rJMSF022I09- GGTTATATGCAGAAGGCACTCTAGCCCTCTTCTCGGGAGGTCGGTTCACAATTCTTTCTT
JMSF022I09+ GGTTATATGCAGAAGGCACTCTAGCCCTCTTCTCGGGAGGTCGGTTCACAATTCTTTCTT
JMFF029C05+ GGTTATATGCAGAAGGCACTCTAGCCCTCTTCTCGGGAGGTCGGTTCACAATTCTTTCTT
JMFN036M23+ GGTTATATGCAGAAGGCACTCTAGCCCTCTTCTCGGGAGGTCGGTTCACAATTCTTTCTT
____________________________________________________________
consensus GGTTATATGCAGAAGGCACTCTAGCCCTCTTCTCGGGAGGTCGGTTCACAATTCTTTCTT
. : . : . : . : . : . :
rJMSF009K10- CAATGCTGGTGGTTATTGGTGGTCGTGTTGGCATCTTGTGATTGAATTTGGAAGAGGAGC
rJMFF029C06- CAATGCTGGTGGTTATTGGNGGNCGNGNTGNCATCTTGTGATTGAATTTGGAAGAGGAGC
rJMFF029C05- CAATGCTGGTGGTTATTGGTGGTCGTGTTGGCATCTTGTGATTGAATTTGGAAGAGGAGC
rJMSF022I09- CAATGCTGGTGGTTATTGGTGGTCGTGTTGGCATCTTGTGATTGAATTTGGAAGAGGAGC
JMSF022I09+ CAATGCTGGTGGTTATTGGTGGTCGTGTTGGCATCTTGTGATTGAATTTGGAAGAGGAGC
JMFF029C05+ CAATGCTGGTGGTTATTGGTGGTCGTGTTGGCATCTTGTGATTGAATTTGGAAGAGGAGC
JMFN036M23+ CAATGCTGGTGGTTATTGGTGGTCGTGTTGGCATCTTGTGATTGAATNTGGAAGAGGAGC
____________________________________________________________
consensus CAATGCTGGTGGTTATTGGTGGTCGTGTTGGCATCTTGTGATTGAATTTGGAAGAGGAGC
. : . : . : . : . : . :
rJMSF009K10- CATTCCCCATGTACTCAGGAGAAGTATAGTTGGGCACCTGAGCACGGTGATCTTGCCATG
rJMFF029C06- CATTCCCCATGTACTCANGAGAAGTATA
rJMFF029C05- CATTCCCCATGTACTCAGGAGAAGTATAGTTGGGCACCTGAGCACGGTGATCTTGCCATG
rJMSF022I09- CATTCCCCATGTACTCAGGAGAAGTATAGTTGGGCACCTGAGCACGGTGATCTTGCCATG
JMSF022I09+ CATTCCCCATGTACTCAGGAGAAGTATAGTTGGGCACCTGAGCACGGTGATCTTGCCATG
JMFF029C05+ CATTCCCCATGTACTCAGGAGAAGTATAGTTGGGCACCTGAGCACGGTGATCTTGCCATG
JMFN036M23+ CATTCCCCATGTACTCAGGAGAAGTATAGTTGGGCACCTGAGCACGGTGATCTTGCCATG
JMSF009K10+ CGGTGATCTTGCCATG
____________________________________________________________
consensus CATTCCCCATGTACTCAGGAGAAGTATAGTTGGGCACCTGAGCACGGTGATCTTGCCATG
. : . : . : . : . : . :
rJMSF009K10- GAGAAGATGGAGGAGATGAAGAGGAGAGAGAGTGATGAAAGGCAGCAGCCATGTTCACAG
rJMFF029C05- GAGAAGATGGAGGAGATGAAGAGGAGAGAGAGTGATGAAAGGCAGCAGCCATGTTCACAG
rJMSF022I09- GAGAAGATGGAGGAGATGAAGAGGAGAGAGAGTGATGAAAGGCAGCAGCCATGTTCACAG
JMSF022I09+ GAGAAGATGGAGGAGATGAAGAGGAGAGAGAGTGATGAAAGGCAGCAGCCATGTTCACAG
JMFF029C05+ GAGAAGATGGAGGAGATGAAGAGGAGAGAGAGTGATGAAAGGCAGCAGCCATGTTCACAG
JMFN036M23+ GAGAAGATGGAGGAGATGAAGAGGAGAGAGAGTGATGAAAGGCAGCAGCCATGTTCACAG
JMSF009K10+ GAGAAGATNGAGGAGATGAAGANGAGAGNGAGTGATGAAAGGCAGCAGCCATGTTCACAG
____________________________________________________________
consensus GAGAAGATGGAGGAGATGAAGAGGAGAGAGAGTGATGAAAGGCAGCAGCCATGTTCACAG
. : . : . : . : . : . :
rJMSF009K10- ACCACAGATTTGTGCAGTGCCCACATCGGACGGTC
rJMFF029C05- ACCACAGATTTGTGCAGTGCCCACATCGGACGGTCACAATTTCATACAGGCTGCTGCATG
rJMSF022I09- ACCACAGATTTGTGCAGTGCCCACATCGGACGGTCACAATTTCATACAGGCTGCTGCATG
JMSF022I09+ ACCACAGATTTGTGCAGTGCCCACATCGGACGGTCACAATTTCATACAGGCTGCTGCATG
JMFF029C05+ ACCACAGATTTGTGCAGTGCCCACATCGGACGGTCACAATTTCATACCNGCTGCTGCATG
JMFN036M23+ ACCACAGATTTGTGCAGTGCCCACATCGGACGGTCACAATTTCATACAGGCTGCTGCATG
JMSF009K10+ ACCACAGATTTGTGCAGTGCCCACATCGGACGGTCACAATTTCATACAGGCTNCTGCATG
____________________________________________________________
consensus ACCACAGATTTGTGCAGTGCCCACATCGGACGGTCACAATTTCATACAGGCTGCTGCATG
. : . : . : . : . : . :
rJMFF029C05- GAACACTCA
rJMSF022I09- GAACACTCACCGCGAGGACGATGTTGCAGAAGTTGCAAGGGATGTAGCAGAGTTGTTCAG
JMSF022I09+ GAACACTCACCGCGAGGACGATGTTGCAGAAGTTGCAAGGGATGTAGCAGAGTTGTTCAG
JMFF029C06+ CGCGAGGACGATGTTGCAGAAGTTGCAAGGGATGTAGCAGAGTTGTTCAG
JMFF029C05+ GAACACTCACCGCGAGGACGATGTTGCAGAAGTTGCAAGGGATGTAGCAGAGTTGTTCAG
JMFN036M23+ GAACACTCACCGCGAGGACGATGTTGCAGAAGTTGCAAGGGATGTAGCAGAGTTGTTCAG
JMSF009K10+ GAACACTCACCGCGAGGACGATGTTGCAGAAGTTGCAAGGGATGTAGCAGAGTTGTTCAG
____________________________________________________________
consensus GAACACTCACCGCGAGGACGATGTTGCAGAAGTTGCAAGGGATGTAGCAGAGTTGTTCAG
. : . : . : . : . : . :
rJMSF022I09- GGGCGGCGGCAGCGTTGCAGGTTGACATGTTTACTGAGGAAAATCTT
JMSF022I09+ GGGCGGCGGCAGCGTTGCAGGTTGACATGTTTACTGAGGAAAATCTTGGGTTGAATATAA
JMFF029C06+ GGGCGGCGGCAGCGTTGCANGTTGACATGTTTAATGAGGAAAATCNTGGGTTGAATATAA
JMFF029C05+ GGGCGGCGGCAGCGTTGCAGGTTGACATGTTTACTGAGGAAAATCTTGGGTTGAATATAA
JMFN036M23+ GGGCGGCGGCAGCGTTGCAGGTTGACATGTTTACTGAGGAAAATCTTGGGTTGAATATAA
JMSF009K10+ GGGCGGCGGCAGCGTTGCAGGTTGACATGTTTACTGAGGAAAATCTTGGGTTGAATATAA
____________________________________________________________
consensus GGGCGGCGGCAGCGTTGCAGGTTGACATGTTTACTGAGGAAAATCTTGGGTTGAATATAA
. : . : . : . : . : . :
JMSF022I09+ TGAGTGATGGTGAAGAAGAAGAAGAAGAAATTACATAAAATGATGAATTGGTAGAACTTA
JMFF029C06+ TGAGTGATGGTGAAGAAGAAGAAGAAGAAATTACATAAAATGATGAATNGGTAGAANTTA
JMFF029C05+ TGAGTGATGGTGAAGAAGAAGAAGAAGAAATTACATAAAATGATGAATTGGTAGAACTTA
JMFN036M23+ TGAGTGATGGTGAAGAAGAAGAAGAAGAAATTACATAAAATGATGAATTGGTAGAACTTA
JMSF009K10+ TGAGTGATGGTGAAGAAGAAGAAGAAGAAATTACATAAAATGATGAATTGGTAGAACTTA
____________________________________________________________
consensus TGAGTGATGGTGAAGAAGAAGAAGAAGAAATTACATAAAATGATGAATTGGTAGAACTTA
. : . : . : . : . : . :
JMSF022I09+ TATATATGGAATTGAAGAGGAGAATTGAAGGCTATTTGGTTCTTGATCTCTGGGCTGCAG
JMFF029C06+ TATATATGGAATTGAAGAGGAGAATTGAAGGCTATTTGGTTCTTGATCTCTGGGCTGCAG
JMFF029C05+ TATATATGGAATTGAAGAGGAGAATTGAAGGCTATTTGGTTCTTGATCTCTGGGCTGCAG
JMFN036M23+ TATATATGGAATTGAAGAGGAGAATTGAAGGCTATTTGGTTCTTGATCTCTGGGCTGCAG
JMSF009K10+ TATATATGGAATTGAAGAGGAGAATTGAAGGCTATTTGGTTCTTGATCTCTGGGCTGCAG
____________________________________________________________
consensus TATATATGGAATTGAAGAGGAGAATTGAAGGCTATTTGGTTCTTGATCTCTGGGCTGCAG
. : . : . : . : . : . :
JMSF022I09+ CT
JMFF029C06+ CTAGAAC
JMFF029C05+ CTAGAAC
JMFN036M23+ CTAGAACAAAGGTAGTGAAAGTGGGGAAACTTGAATATAAAGAGAGAGAA
JMSF009K10+ CTAGAACAAAGGTAGTGAAAGTGGGGAAACTTGAATATAAAGAGAGAGAACTTTATTCTC
____________________________________________________________
consensus CTAGAACAAAGGTAGTGAAAGTGGGGAAACTTGAATATAAAGAGAGAGAACTTTATTCTC