Contig 013256:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047E04Sequence414013256 (3)ref|XP_008655101.1|1e-19PREDICTED: CTP synthase isoform X1 [Zea mays]383004135 (5)
JMSF009G22Sequence288013256 (3)787004135 (5)ref|XP_009592741.1|3e-56PREDICTED: CTP synthase-like isoform X3 [Nicotiana tomentosiformis]
JMSF028E05Sequence627013256 (3)ref|XP_008386738.1|3e-52PREDICTED: CTP synthase-like [Malus domestica]732004135 (5)ref|XP_009592741.1|5e-49PREDICTED: CTP synthase-like isoform X3 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF028E05+ TACTGATTCAATCCAATTCTTAATGGCAT
                      ____________________________________________________________
consensus TACTGATTCAATCCAATTCTTAATGGCAT
 
. : . : . : . : . : . :
JMSF028E05+ CAGTAATGTGTGGGACAACCTGAACAGTTTTTCCAAGATAGTCACCTCTCCGTTCCTTCT
                      ____________________________________________________________
consensus CAGTAATGTGTGGGACAACCTGAACAGTTTTTCCAAGATAGTCACCTCTCCGTTCCTTCT
 
. : . : . : . : . : . :
JMFF047E04+ AT
JMSF028E05+ CAAGCACAGACTGATATATCTTTCCTGTTGTAATATTGTTGTCCCTCGTAAGTGTGACAT
                      ____________________________________________________________
consensus CAAGCACAGACTGATATATCTTTCCTGTTGTAATATTGTTGTCCCTCGTAAGTGTGACAT
 
. : . : . : . : . : . :
JMFF047E04+ CTAAAAACCGTTCATAATTGCCCAAATCTAGATCAACCTCTCCACCATCGTCAAGCACAA
JMSF028E05+ CTAAAAACCGTTCATAATTGCCCAAATCTAGATCAACCTCTCCACCATCGTCAAGCACAA
                      ____________________________________________________________
consensus CTAAAAACCGTTCATAATTGCCCAAATCTAGATCAACCTCTCCACCATCGTCAAGCACAA
 
. : . : . : . : . : . :
JMFF047E04+ AAACTTCCCCATGCTCGAAAGGAGACATTGTACCGGCATCAGTGTTCAAGTATGGATCAA
JMSF028E05+ AAACTTCCCCATGCTCGAAAGGAGACATTGTACCGGCATCAGTGTTCAAATATGGATCAA
                      ____________________________________________________________
consensus AAACTTCCCCATGCTCGAAAGGAGACATTGTACCGGCATCAGTGTTCAAGTATGGATCAA
 
. : . : . : . : . : . :
JMFF047E04+ TTTTGATGGAGGTAACGCGAAGGCCGCAGGCTTTGAGAACAACACCGATACTGCTGGCAG
JMSF028E05+ TTTTGATGGAGGTAACGCGAAGGCCGCAGGCTTTGAGAACAACACCGATACTGCTGGCAG
                      ____________________________________________________________
consensus TTTTGATGGAGGTAACGCGAAGGCCGCAGGCTTTGAGAACAACACCGATACTGCTGGCAG
 
. : . : . : . : . : . :
JMFF047E04+ TGACACCCTTGCCGAGGCCACTCACCACTCCTCCGGTCACCAAAACGTACTTCATTCTTC
JMSF028E05+ TGACACCCTTGCCGAGGCCACTCACCACTCCTCCGGTCACCAAAACGTACTTCATTCTTC
JMSF009G22+ CGAGGCCACTCACCACTCCTCCGGTCACCAAAACGTACTTCATTCTTC
                      ____________________________________________________________
consensus TGACACCCTTGCCGAGGCCACTCACCACTCCTCCGGTCACCAAAACGTACTTCATTCTTC
 
. : . : . : . : . : . :
JMFF047E04+ CTTGCTTGGGTGTTTTTGGGCTTAGGGTATCGCAGTTGAGTTATCGGTTTGCTGTGATTG
JMSF028E05+ CTTGCTTGGGTGTTTTTGGGCTTAGGGTATCGCAGTTGAGTTATCGGTTTGCTGTGATTG
JMSF009G22+ CTTGCTTGGGTGTTTTTGGGCTTAGGGTATCGCAGTTGAGTTATCGGTTTGCTGTGATTG
                      ____________________________________________________________
consensus CTTGCTTGGGTGTTTTTGGGCTTAGGGTATCGCAGTTGAGTTATCGGTTTGCTGTGATTG
 
. : . : . : . : . : . :
JMFF047E04+ TGCCGCCGACCAACCACCCGCGTTAATGTCTGGGCAGGAAGGTTTATTATAAAGGTTCGA
JMSF028E05+ TGCCGCCGACCAACCACCCGCGTTAATGTCTGGGCAGGAAGGTTTATTATAAAGGTTCGA
JMSF009G22+ TGCCGCCGACCAACCACCCGCGTTAATGTCTGGGCAGGAAGGTTTATTATAAAGGTTCGA
                      ____________________________________________________________
consensus TGCCGCCGACCAACCACCCGCGTTAATGTCTGGGCAGGAAGGTTTATTATAAAGGTTCGA
 
. : . : . : . : . : . :
JMFF047E04+ CGAGTCTTTGAACTGTGGACGGTTGAAGAACC
JMSF028E05+ CGAGTCTTTGAACTGTGGACGGTTGAAGAACCCAAGTCTAATTGTCAAACGCTCTGCAGT
JMSF009G22+ CGAGTCTTTGAACTGTGGACGGTTGAAGAACCCAAGTCTAATTGTCAAACGCTCTGCAGT
                      ____________________________________________________________
consensus CGAGTCTTTGAACTGTGGACGGTTGAAGAACCCAAGTCTAATTGTCAAACGCTCTGCAGT
 
. : . : . : . : . : . :
JMSF028E05+ CGCTGTCCCTGTTTTTCATTTATATACGACGGCCTGATGGGTCTCTTCTCCGCC
JMSF009G22+ CGCTGTCCCTGTTTTTCATTTATATACGACGGCCTGATGGGTCTCTTCTCCGCCCGTATC
                      ____________________________________________________________
consensus CGCTGTCCCTGTTTTTCATTTATATACGACGGCCTGATGGGTCTCTTCTCCGCCCGTATC