Contig 013253:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF008P14-                                TATTGACAACTGATCAGCTTCAGAANACGAAGCACAAT
rJMSF040B03-                                                          ACGAAGCACAAT
rJMSF040A02-                                                          ACGAAGCACAAT
                      ____________________________________________________________
consensus                                   TATTGACAACTGATCAGCTTCAGAANACGAAGCACAAT
 
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rJMSF008P14-          TTACNAATGCAAATAGTAAAAAAAATAAAAAATAATGGAGATGATGTATTATTAACATAA
rJMSF040B03-          TTACAAATGCAAATAGTAAAAAAAATAAAAAATAATGGAGATGATGTATTATTAACATAA
rJMSF040A02-          TTACAAATGCAAATAGTAAAAAAAATAAAAAATAATGGAGATGATGTATTATTAACATAA
                      ____________________________________________________________
consensus             TTACAAATGCAAATAGTAAAAAAAATAAAAAATAATGGAGATGATGTATTATTAACATAA
 
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rJMSF008P14-          CAAATAGACTTACAAACTGAAATTGTACATCATTTGTAAACAAGTAGAAGATCCAGTTTC
rJMSF040B03-          CAAATAGACTTACAAACTGAAATTGTACATCATTTGTAAACAAGTAGAAGATCCAGTTTC
rJMSF040A02-          CAAATAGACTTACAAACTGAAATTGTACATCATTTGTAAACAAGTAGAAGATCCAGTTTC
                      ____________________________________________________________
consensus             CAAATAGACTTACAAACTGAAATTGTACATCATTTGTAAACAAGTAGAAGATCCAGTTTC
 
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rJMSF008P14-          AGGAAGAGAAAAGCTCTTACAAAACTTACGCTGCCAGGGTCAGGGGGCCAGGCAGCAGCA
rJMSF040B03-          AGGAAGAGAAAAGCTCTTACAAAACTTACGCTGCCAGGGTCAGGGGGCCAGGCAGCAGCA
rJMSF040A02-          AGGAAGAGAAAAGCTCTTACAAAACTTACGCTGCCAGGGTCAGGGGGCCAGGCAGCAGCA
                      ____________________________________________________________
consensus             AGGAAGAGAAAAGCTCTTACAAAACTTACGCTGCCAGGGTCAGGGGGCCAGGCAGCAGCA
 
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rJMSF008P14-          GAAGCACAAGATCACAACTCGGAATGAAAGGGCATCTCGTGAATCGTGATGACGTTATTT
rJMSF040B03-          GAAGCACAAGATCACAACTCGGAATGAAAGGGCATCTCGTGAATCGTGATGACGTTATTT
rJMSF040A02-          GAAGCACAAGATCACAACTCGGAATGAAAGGGCATCTCGTGAATCGTGATGACGTTATTT
                      ____________________________________________________________
consensus             GAAGCACAAGATCACAACTCGGAATGAAAGGGCATCTCGTGAATCGTGATGACGTTATTT
 
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rJMSF008P14-          ACAAGAGCTCCAAGAAACAATGTGTTGGGCAAAGAGTTTAGGCGTTCTAAGCAATCCACG
rJMSF040B03-          ACAAGAGCTCCAAGAAACAATGTGTTGGGCAAAGAGTTTAGGCGTTCTAAGCAATCCACG
rJMSF040A02-          ACAAGAGCTCCAAGAAACAATGTGTTGGGCAAAGAGTTTAGGCGTTCTAAGCAATCCACG
                      ____________________________________________________________
consensus             ACAAGAGCTCCAAGAAACAATGTGTTGGGCAAAGAGTTTAGGCGTTCTAAGCAATCCACG
 
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rJMSF008P14-          CAAAGTGCCATGGGGCATCTGTGTTAGGCAACAAATCATCCACACCACAGTGCTGTCGCT
rJMSF040B03-          CAAAGTGCCATGGGGCATCTGTGTTAGGCAACAAATCATCCACACCACAGTGCTGTCGCT
rJMSF040A02-          CAAAGTGCCATGGGGCATCTGTGTTAGGCAACAAATCATCCACACCACAGTGCTGTCGCT
                      ____________________________________________________________
consensus             CAAAGTGCCATGGGGCATCTGTGTTAGGCAACAAATCATCCACACCACAGTGCTGTCGCT
 
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rJMSF008P14-          TATGACCTCCTTAATTGGTCACAAGTGAAAAACGGATGCTTGAGTGCATTTCGAGCTGTC
rJMSF040B03-          TATGACCTCCTTAATTGGTCACAAGTGAAAAACGGATGCTTGAGTGCATTTCGAGCTGTC
rJMSF040A02-          TATGACCTCCTTAATTGGTCACAAGTGAAAAACGGATGCTTGAGTGCATTTCGAGCTGTC
                      ____________________________________________________________
consensus             TATGACCTCCTTAATTGGTCACAAGTGAAAAACGGATGCTTGAGTGCATTTCGAGCTGTC
 
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rJMSF008P14-          ATCCTTATAGACGGGTCATATCTAAGTAGTCCTTGCAGGAGGTCGATAAGATCACCTGCT
rJMSF040B03-          ATCCTTATAGACGGGTCATATCTAAGTAGTCCTTGCAGGAGGTCGATAAGATCACCTGCT
rJMSF040A02-          ATCCTTATAGACGGGTCATATCTAAGTAGTCCTTGCAGGAGGTCGATAAGATCACCTGCT
                      ____________________________________________________________
consensus             ATCCTTATAGACGGGTCATATCTAAGTAGTCCTTGCAGGAGGTCGATAAGATCACCTGCT
 
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rJMSF008P14-          GAGTGATCAACATGCTGCATCACCAAGTTCTGAAGACGAGGTAATTTCATGACAGACTTA
rJMSF040B03-          GAGTGATCAACATGCTGCATCACCAAGTTCTGAAGACGAGGTAATTTCATGACAGACTTA
rJMSF040A02-          GAGTGATCAACATGCTGCATCACCAAGTTCTGAAGACGAGGTAATTTCATGACAGACTTA
                      ____________________________________________________________
consensus             GAGTGATCAACATGCTGCATCACCAAGTTCTGAAGACGAGGTAATTTCATGACAGACTTA
 
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rJMSF008P14-          ATGCTATTCCTTGATGTTGCACCTTCTGGCCAGTCAAGTCTACCCCTTTTCACATATTTC
rJMSF040B03-          ATGCTATTCCTTGATGTTGCACCTTCTGGCCAGTCAAGTCTACCCCTTTTCACATATTTC
rJMSF040A02-          ATGCTATTCCTTGATGTTGCACCTTCTGGCCAGTCAAGTCTACCCCTTTTCACATATTTC
                      ____________________________________________________________
consensus             ATGCTATTCCTTGATGTTGCACCTTCTGGCCAGTCAAGTCTACCCCTTTTCACATATTTC
 
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rJMSF008P14-          TCAGCATGTCGATCAGCTCTTTTCAAAATGTGCAGTGGCAAAGGACCCAAAACTCTCTCC
rJMSF040B03-          TCAGCATGTCGATCAGCTCTTTTCAAAATGTGCAGTGGCAAAGGACCCAAAACTCTCTCC
rJMSF040A02-          TCAGCATGTCGATCAGCTCTTTTCAAAATGTGCAGTGGCAAAGGACCCAAAACTCTCTCC
                      ____________________________________________________________
consensus             TCAGCATGTCGATCAGCTCTTTTCAAAATGTGCAGTGGCAAAGGACCCAAAACTCTCTCC
 
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rJMSF008P14-          ATCATGGCAAGGTGCTCTANGTTTTCATGTGTTTGG                        
rJMSF040B03-          ATCATGGCAAGGTGCTCTAAGTTTTCATGTGTTTGGAACAAAGCTTCACCCGAGCACAGT
rJMSF040A02-          ATCATGGCAAGGTGCTCTAAGTTTTCATGTGTTTGGAACAAAGCTTCACCCGAGCACAGT
JMFS110E07+                                         GTTTGGAGCAAAGCTTCACCCGAGCACAGT
                      ____________________________________________________________
consensus             ATCATGGCAAGGTGCTCTAAGTTTTCATGTGTTTGGAACAAAGCTTCACCCGAGCACAGT
 
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rJMSF040B03-          TCTACCAATATACATCCAACACTCCACATATCACATGGGTAGCTCCATCCAAGACCCAGG
rJMSF040A02-          TCTACCAATATACATCCAACACTCCACATATCACATGGGTAGCTCCATCCAAGACCCAGG
JMFS110E07+           TCTAGCAATATACATCCAACACTCCACATATCACATGGGTAGCTCCATCCAAGACCCAGG
                      ____________________________________________________________
consensus             TCTACCAATATACATCCAACACTCCACATATCACATGGGTAGCTCCATCCAAGACCCAGG
 
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rJMSF040B03-          ATAACCTCAGGT                                                
rJMSF040A02-          ATAACCTCAGGTGCACGGTAATGTCTAGTAGAGACAATATAGTTGTGATCTTGACGCTCA
JMFS110E07+           ATACCCTCAGGTGCACGGTAATGTCTAGTAGAGACAATATAGTTGTGATCTTGACGCTCA
                      ____________________________________________________________
consensus             ATAACCTCAGGTGCACGGTAATGTCTAGTAGAGACAATATAGTTGTGATCTTGACGCTCA
 
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rJMSF040A02-          TAAGCTGTGCTACCAAAATCAATCACTTTGATAGCACTTGATTTTGGTAACC        
JMFS110E07+           TAAGCTGTGCTACCAAAATCAATCACTTTGATAGCACTTGATTTTGGTAACCTCTTATAG
                      ____________________________________________________________
consensus             TAAGCTGTGCTACCAAAATCAATCACTTTGATAGCACTTGATTTTGGTAACCTCTTATAG
 
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JMFS110E07+           AATGATCCATCTATTGGTGGCCATGGTGCAAACTTGTAGTCAGGGACTCTTATGTAGTCT
                      ____________________________________________________________
consensus             AATGATCCATCTATTGGTGGCCATGGTGCAAACTTGTAGTCAGGGACTCTTATGTAGTCT
 
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JMFS110E07+           GGAGATACAAAGAGTATATTCTCAGGCTTCAAATCAGTGTGGATTAGACGCATATCATGC
                      ____________________________________________________________
consensus             GGAGATACAAAGAGTATATTCTCAGGCTTCAAATCAGTGTGGATTAGACGCATATCATGC
 
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JMFS110E07+           ATGAATGCTACACATTCCAACAGTTGTCTGGCAATCTCGCGAACTAGGTCAGCTGGAAAT
                      ____________________________________________________________
consensus             ATGAATGCTACACATTCCAACAGTTGTCTGGCAATCTCGCGAACTAGGTCAGCTGGAAAT
 
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JMFS110E07+           GAGCGATAATTGTTTTTCCGTAGACAATCGAATAAACTTGGTCCAAGCTTCTCAAACACT
JMSF040A02+                                                                    ACT
                      ____________________________________________________________
consensus             GAGCGATAATTGTTTTTCCGTAGACAATCGAATAAACTTGGTCCAAGCTTCTCAAACACT
 
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JMFS110E07+           AAACATATATGGTTCCGGTAATCAAACCAGTTCCGTAATTGAACACATCGACTGCCACTC
JMSF040A02+           AAACATATATGGTTACGGTAATCAAACCAGTTCCGTAATTGAACACAACGACTGCCACTC
                      ____________________________________________________________
consensus             AAACATATATGGTTCCGGTAATCAAACCAGTTCCGTAATTGAACACATCGACTGCCACTC
 
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JMFS110E07+           CTGTCATATCTTCCAAGCAACTGAAGCACATCAACTTCTACCATTGCAGCCTCACGATAC
JMSF040A02+           CTGTCATATCTTCCAAGCAACTGAAGCACATCAACTTCTACCATTGCAGCCTCACGATAC
                      ____________________________________________________________
consensus             CTGTCATATCTTCCAAGCAACTGAAGCACATCAACTTCTACCATTGCAGCCTCACGATAC
 
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JMFS110E07+           TTTTTAATGCTGCGGACAATTTTTATAGCAACCAACTCCTTATGATCCCTATCCCAGCAT
JMSF040A02+           TTTTTAATGCTGCGGACAATTTTTATAGCAACCAACTCCTTCTGATCCCTATCCCAGCAT
                      ____________________________________________________________
consensus             TTTTTAATGCTGCGGACAATTTTTATAGCAACCAACTCCTTCTGATCCCTATCCCAGCAT
 
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JMFS110E07+           TCCAGAACTTGACCAAAGGTA                                       
JMSF040A02+           TCCAGAACTCGACCAAAGGTACCTTCCCCAATCTTCCTAAGGATCTTATAGCGGGTAGTT
                      ____________________________________________________________
consensus             TCCAGAACTTGACCAAAGGTACCTTCCCCAATCTTCCTAAGGATCTTATAGCGGGTAGTT
 
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JMSF040A02+           AAATTTTCTCCCAGCTCAAATATGTAATGCCCATCTTTGTCATCATCTCGCCATGGGGGA
                      ____________________________________________________________
consensus             AAATTTTCTCCCAGCTCAAATATGTAATGCCCATCTTTGTCATCATCTCGCCATGGGGGA
 
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JMSF040A02+           GAGCCTTTTTGAGCCAGTCCCTTTACATATACATTATCATGATGAGAAAGTACTCTTCCA
                      ____________________________________________________________
consensus             GAGCCTTTTTGAGCCAGTCCCTTTACATATACATTATCATGATGAGAAAGTACTCTTCCA
 
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JMSF040A02+           TGTGCATAGCTTGACACAGTGCCAACCTCTTGCCCATAATATATCCCTGGCTGAGCCTTG
JMSF008P14+                        ACACAGTGCCAACCTCTTGCCCATAATATATCCCTGGCTGAGCCTTG
                      ____________________________________________________________
consensus             TGTGCATAGCTTGACACAGTGCCAACCTCTTGCCCATAATATATCCCTGGCTGAGCCTTG
 
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JMSF040A02+           GGAGTATGAGAAGGGTCCCAATCTAATCTGGCTCGTTTCTTAGGGCGACGATCCATGTAA
JMSF008P14+           GGAGTATGAGAAGGGTCCCAATCTAATCTGGCTCGTTTCTTAGGGCGACGATCCATGTAA
                      ____________________________________________________________
consensus             GGAGTATGAGAAGGGTCCCAATCTAATCTGGCTCGTTTCTTAGGGCGACGATCCATGTAA
 
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JMSF040A02+           GCCTGAGGATAGTCAGCCATGAGATCTGTTTCCATGGATTAATCATTCACAGAGATTAGA
JMSF008P14+           GCCTGAGGATAGTCAGCCATGAGATCTGTTTCCATGGATTAATCATTCACAGAGATTAGA
                      ____________________________________________________________
consensus             GCCTGAGGATAGTCAGCCATGAGATCTGTTTCCATGGATTAATCATTCACAGAGATTAGA
 
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JMSF040A02+           TACAGAAAGCACGACATAGAGAGAGAAAAAGGAGAGAGAAACCCTAACCG          
JMSF008P14+           TACAGAAAGCACGACATAGAGAGAGAAAAAGGAGAGAGAAACCCTAACCGTAGGTAAACC
                      ____________________________________________________________
consensus             TACAGAAAGCACGACATAGAGAGAGAAAAAGGAGAGAGAAACCCTAACCGTAGGTAAACC