Contig 013252:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN018C10+                    AAAAATCTATATATGATATATATCACATTTCTGATTCAAATTACATTCTAA
rJMSF008K18-                                                         AATTACATTCTAA
                      ____________________________________________________________
consensus                      AAAAATCTATATATGATATATATCACATTTCTGATTCAAATTACATTCTAA
 
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JMFN018C10+           TTCAAATACACAGATCATAGAGAGAGAGAGAGAGACAACATGTAAGATAGATATATGGTG
rJMSF008K18-          TTCAAATACACAGATCATAGAGAGAGAGAGAGAGACAACATGTAAGATAGATATATGGTG
                      ____________________________________________________________
consensus             TTCAAATACACAGATCATAGAGAGAGAGAGAGAGACAACATGTAAGATAGATATATGGTG
 
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JMFN018C10+           CATATGATCTGATCTCTCCGATCTCCTCATCAAAACTTGTCTGCAGGTTCATCCATGGCG
rJMSF008K18-          CATATGATCTGATCTCTCCGATCTCCTCATCAAAACTTGTCTGCAGGTTCATCCATGGCG
                      ____________________________________________________________
consensus             CATATGATCTGATCTCTCCGATCTCCTCATCAAAACTTGTCTGCAGGTTCATCCATGGCG
 
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JMFN018C10+           GAAATTAACCCTCCCTTTTTCAAGAATCGTCTCGGTGCTTATTCCAGCGCACAAGCATGC
rJMSF008K18-          GAAATTAACCCTCCCTTTTTCAAGAATCGTCTCGGTGCTTATTCCAGCGCACAAGCATGC
                      ____________________________________________________________
consensus             GAAATTAACCCTCCCTTTTTCAAGAATCGTCTCGGTGCTTATTCCAGCGCACAAGCATGC
 
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JMFN018C10+           CGATGCATCGCTTGACGATGTAGAACTTCGCCTTCTGCTCCTTGGCCAAGTTGCTGCACT
rJMSF008K18-          CGATGCATCGCTTGACGATGTAGAACTTCGCCTTCTGCTCCTTGGCCAAGTTGCTGCACT
JMSF008K18+                                                 TCCTTGGCCAAGTTGCTGCACT
                      ____________________________________________________________
consensus             CGATGCATCGCTTGACGATGTAGAACTTCGCCTTCTGCTCCTTGGCCAAGTTGCTGCACT
 
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JMFN018C10+           TGCGCGTGAACTGGGACGAGCTTTTCGAGAATCGAGATTTCGAAGAAGAAGAAGGATTCT
rJMSF008K18-          TGCGCGTGAACTGGGACGAGCTTTTCGAGAATCGAGATTTCGAAGAAGAAGAAGGATTCT
JMSF008K18+           TGCGCGTGAACTGGGACGAGCTTTTCGAGAATCGAGATTTCGAAGAAGAAGAAGGATTCT
                      ____________________________________________________________
consensus             TGCGCGTGAACTGGGACGAGCTTTTCGAGAATCGAGATTTCGAAGAAGAAGAAGGATTCT
 
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JMFN018C10+           TCTGCGAAAAGCTCCTGGGAAGAGGATGGTTTGAAGTTGAAGGGCTTGCTTGAGAGAAGC
rJMSF008K18-          TCTGCGAAAAGCTCCTGGGAAGAGGATGGTTTGAAGTTGAAGGGCTTGCTTGAGAGAAGC
JMSF008K18+           TCTGCGAAAAGCTCCTGGGAAGAGGATGGTTTGAAGTTGAAGGGCTTGCTTGAGAGAAGC
                      ____________________________________________________________
consensus             TCTGCGAAAAGCTCCTGGGAAGAGGATGGTTTGAAGTTGAAGGGCTTGCTTGAGAGAAGC
 
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JMFN018C10+           TCCTCATTAATGTCGGATTGCTCGAGCTCGAATATGAATGGCTGTATGGATCATCCCTCG
rJMSF008K18-          TCCTCATTAATGTCGGATTGCTCGAGCTCGAATATGAATGGCTGTATGGATCATCCCTCG
JMSF008K18+           TCCTCATTAATGTCGGATTGCTCGAGCTCGAATATGAATGGCTGTATGGATCATCCCTCG
                      ____________________________________________________________
consensus             TCCTCATTAATGTCGGATTGCTCGAGCTCGAATATGAATGGCTGTATGGATCATCCCTCG
 
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JMFN018C10+           ACAGCTTCCATTTCTCGTCCATGTAATACTCCATTGATGAACACCTAAGCTAAG      
rJMSF008K18-          ACAGCTTCCATTTCTCGTCCATGTAATACTCCATTGATGAACACCTAAGCTAAGAAAGAG
JMSF008K18+           ACAGCTTCCATTTCTCGTCCANGTAATACTCCANTGATGAACACCTAAGCTAAGAAAGAG
                      ____________________________________________________________
consensus             ACAGCTTCCATTTCTCGTCCATGTAATACTCCATTGATGAACACCTAAGCTAAGAAAGAG
 
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rJMSF008K18-          AGA                                                         
JMSF008K18+           AGAGAGAGAGAGAGAGAGAGAGAGAAAGGGTGTTGAATTGGTTGATGAGACTAGACCGTC
                      ____________________________________________________________
consensus             AGAGAGAGAGAGAGAGAGAGAGAGAAAGGGTGTTGAATTGGTTGATGAGACTAGACCGTC