clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF024B15 | Sequence | 506 | 013251 (9) | ref|XP_009757548.1| | 5e-74 | PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris] | 718 | 012462 (9) | ref|XP_006359499.1| | 1e-50 | PREDICTED: heparanase-like protein 3-like [Solanum tuberosum] |
JMFF027N13 | Sequence | 415 | 013251 (9) | ref|XP_009757548.1| | 1e-50 | PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris] | 676 | 012462 (9) | ref|XP_006359499.1| | 8e-51 | PREDICTED: heparanase-like protein 3-like [Solanum tuberosum] |
JMFF048D22 | Sequence | 412 | 013251 (9) | ref|XP_009757548.1| | 8e-43 | PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris] | 346 | 012462 (9) | ref|XP_009409980.1| | 9e-05 | PREDICTED: heparanase-like protein 3 [Musa acuminata subsp. malaccensis] |
JMFS119G11 | Sequence | 627 | 013251 (9) | ref|XP_007013614.1| | 5e-46 | Glucuronidase 3 isoform 2 [Theobroma cacao] gb|EOY31233.1| Glucuronidase 3 isofo | |||||
JMSF008J17 | Sequence | 384 | 013251 (9) | 741 | 012462 (9) | ref|XP_006359499.1| | 3e-85 | PREDICTED: heparanase-like protein 3-like [Solanum tuberosum] | |||
JMSF009C03 | Sequence | 319 | 013251 (9) | 751 | 012462 (9) | ref|XP_006359499.1| | 2e-87 | PREDICTED: heparanase-like protein 3-like [Solanum tuberosum] | |||
JMSF016P07 | Sequence | 415 | 013251 (9) | 773 | 012462 (9) | ref|XP_006359499.1| | 6e-85 | PREDICTED: heparanase-like protein 3-like [Solanum tuberosum] | |||
JMSF036E03 | Sequence | 675 | 013251 (9) | ref|XP_009757548.1| | 5e-78 | PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris] | 707 | 012462 (9) | ref|XP_006359499.1| | 7e-71 | PREDICTED: heparanase-like protein 3-like [Solanum tuberosum] |
JMSF045L01 | Sequence | 759 | 013251 (9) | ref|XP_009757548.1| | 8e-98 | PREDICTED: heparanase-like protein 3 [Nicotiana sylvestris] | 847 | 012462 (9) | ref|XP_006359499.1| | 3e-82 | PREDICTED: heparanase-like protein 3-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS119G11+ AGACACTGGGT
____________________________________________________________
consensus AGACACTGGGT
. : . : . : . : . : . :
JMFS119G11+ GGTGGACATGGCCCTTTTAAGCCCTTTATCGGCCACTGCCCAACAACCCCCAGACACCAC
____________________________________________________________
consensus GGTGGACATGGCCCTTTTAAGCCCTTTATCGGCCACTGCCCAACAACCCCCAGACACCAC
. : . : . : . : . : . :
JMFS119G11+ CGGGTGCTAGACTTGGCCTTTCNCAGGCTTCGCCTAACAAATAGTTTTACTTAAAGCAGA
____________________________________________________________
consensus CGGGTGCTAGACTTGGCCTTTCNCAGGCTTCGCCTAACAAATAGTTTTACTTAAAGCAGA
. : . : . : . : . : . :
JMFS119G11+ GAATCAAAGATAGATGCTGATGTTTGGAATATACACAATATACAAAATGTTGCAGTGCTA
____________________________________________________________
consensus GAATCAAAGATAGATGCTGATGTTTGGAATATACACAATATACAAAATGTTGCAGTGCTA
. : . : . : . : . : . :
JMFS119G11+ AGAAATAGCGACTTCTCTGATCTTACCCAACTCCCACCCGTGGATAGTGTAACCCTTTTC
____________________________________________________________
consensus AGAAATAGCGACTTCTCTGATCTTACCCAACTCCCACCCGTGGATAGTGTAACCCTTTTC
. : . : . : . : . : . :
JMFS119G11+ GACAGTATATTTCATAAGAGATTCAGCGTTTGTTGAATCCCAGGCTCCAACAGCAGAAGC
____________________________________________________________
consensus GACAGTATATTTCATAAGAGATTCAGCGTTTGTTGAATCCCAGGCTCCAACAGCAGAAGC
. : . : . : . : . : . :
JMFS119G11+ ATCGGACCGTATAGATCTTCCCGTGAGAGCGTTCAAGCCAAAAATGATAACAGCTCTGAG
____________________________________________________________
consensus ATCGGACCGTATAGATCTTCCCGTGAGAGCGTTCAAGCCAAAAATGATAACAGCTCTGAG
. : . : . : . : . : . :
JMFS119G11+ TAGAACACGCAAAGATGATACATACAGTTAGGAGTGCTGACATATATAAGCTGGACAAGG
____________________________________________________________
consensus TAGAACACGCAAAGATGATACATACAGTTAGGAGTGCTGACATATATAAGCTGGACAAGG
. : . : . : . : . : . :
JMFS119G11+ AATGAATCTCGTTGGTTACCCGGATTTATTAAAGAACACATTTAGCTCGTCCCATCTAGA
JMFF024B15+ CCGGATTTATTAAAGAACACATTTAGCTCGTCCCATCTAGA
JMSF036E03+ CCGGATTTATTAAAGAACACATTTAGCTCGTCCCATCTAGA
JMSF045L01+ CCGGATTTATTAAAGAACACATTTAGCTCGTCCCATCTAGA
____________________________________________________________
consensus AATGAATCTCGTTGGTTACCCGGATTTATTAAAGAACACATTTAGCTCGTCCCATCTAGA
. : . : . : . : . : . :
JMFS119G11+ CAACGGCAAACACCCTTGACTGAAAGAAAATATTTCTGATGTGTTTGAAACAAATGAAGT
JMFF024B15+ CAACGGCAAACACCCTTGACTGAAAGAAAATATTTCTGATGTGTTTGAAACAAATGAAGT
JMFF027N13+ TGAAAGAAAATATTTCTGATGTGTTTGAAACAAATGAAGT
JMFF048D22+ AAAGAAAATATTTCTGATGTGTTTGAAACAAATGAAGT
JMSF036E03+ CAACGGCAAACACCCTTGACTGAAAGAAAATATTTCTGATGTGTTTGAAACAAATGAAGT
JMSF045L01+ CAACGGCAAACACCCTTGACTGAAAGAAAATATTTCTGATGTGTTTGAAACAAATGAAGT
____________________________________________________________
consensus CAACGGCAAACACCCTTGACTGAAAGAAAATATTTCTGATGTGTTTGAAACAAATGAAGT
. : . : . : . : . : . :
JMFS119G11+ GCAAGGTACACGATCATCTTTAGTTTGGTAGACGACCTTATCTTGCAAAGTGCCACCCAA
JMFF024B15+ GCAAGGTACACGATCATCTTTAGTTTGGTAGACGACCTTATCTTGCAAAGTGCCACCCAA
JMFF027N13+ GCAAGGTACACGATCATCTTTAGTTNGGTAGACGACCTTATCTTGCAAAGTGCCACCCAA
JMFF048D22+ GCAAGGTACACGATCATCTTTAG-TTGGTAGACGACCTTATCTTGCAAAGTGCCACCCAA
JMSF036E03+ GCAAGGTACACGATCATCTTTAGTTTGGTAGACGACCTTATCTTGCAAAGTGCCACCCAA
JMSF045L01+ GCAAGGTACACGATCATCTTTAGTTTGGTAGACGACCTTATCTTGCAAAGTGCCACCCAA
____________________________________________________________
consensus GCAAGGTACACGATCATCTTTAGTTTGGTAGACGACCTTATCTTGCAAAGTGCCACCCAA
. : . : . : . : . : . :
JMFS119G11+ CCGAATTTTTAAAGGT
JMFF024B15+ CCGAATTTTTAAAGGTGAGAATGCTTTTATTGCATTTAAAAAAATAATGTTACTAAGATC
JMFF027N13+ CCGAATTTTTAAAGGTGAGAATGCTTTTATTGCATTTAAAAAAATAATGTTACTAAGATC
JMFF048D22+ CCGAATTTTTAAAGGTGAGAATGCTTTTATTGCATTTAAAAAAATAATGTTACTAAGATC
JMSF036E03+ CCGAATTTTTAAAGGTGAGAATGCTTTTATTGCATTTAAAAAAATAATGTTACTAAGATC
JMSF045L01+ CCGAATTTTTAAAGGTGAGAATGCTTTTATTGCATTTAAAAAAATAATGTTACTAAGATC
____________________________________________________________
consensus CCGAATTTTTAAAGGTGAGAATGCTTTTATTGCATTTAAAAAAATAATGTTACTAAGATC
. : . : . : . : . : . :
JMFF024B15+ CAAATTTAGCAGAGAAGCATGGCCCCAAGCACAGGTTCCATAGTCACACTTCTCAGGTGG
JMFF027N13+ CAAATTTAGCAGAGAAGCATGGCCCCAAGCACAGGTTCCATAGTCACACTTCTCAGGTGG
JMFF048D22+ CAAATTTAGCAGAGAAGCATGGCCCCAAGCACAGGTTCCATAGTCACACTTCTCAGGTGG
JMSF036E03+ CAAATTTAGCAGAGAAGCATGGCCCCAAGCACAGGTTCCATAGTCACACTTCTCAGGTGG
JMSF045L01+ CAAATTTAGCAGAGAAGCATGGCCCCAAGCACAGGTTCCATAGTCACACTTCTCAGGTGG
____________________________________________________________
consensus CAAATTTAGCAGAGAAGCATGGCCCCAAGCACAGGTTCCATAGTCACACTTCTCAGGTGG
. : . : . : . : . : . :
JMFF024B15+ CCACCAATCCAAGGTAGCACATATGAAATCACTGTCTGTCCTCCCAATCCTACTTTTCCC
JMFF027N13+ CCACCAATCCAAGGTAGCACATATGAAATCACTGTCTGTCCTCCCAATCCTACTTTTCCC
JMFF048D22+ CCACCAATCCAAGGTAGCACATATGAAATCACTGTCTGTCCTCCCAATCCTACTTTTCCC
JMSF036E03+ CCACCAATCCAAGGTAGCACATATGAAATCACTGTCTGTCCTCCCAATCCTACTTTTCCC
JMSF045L01+ CCACCAATCCAAGGTAGCACATATGAAATCACTGTCTGTCCTCCCAATCCTACTTTTCCC
JMSF016P07+ TCCTACTTTTCCC
____________________________________________________________
consensus CCACCAATCCAAGGTAGCACATATGAAATCACTGTCTGTCCTCCCAATCCTACTTTTCCC
. : . : . : . : . : . :
JMFF024B15+ ATCCACATATACACTACCTTTATCACCAAGAGTTTCAGACCCAGAAATCAAGCTCACATT
JMFF027N13+ ATCCACATATACACTACCTTTATCACCAAGAG-TTCAGACCCAGAAATCAAGCTCACATT
JMFF048D22+ ATCCACATATACACTACCTTTATCACCAAGAGTTTCAGACCCAGAAATCAAGCTCACATT
JMSF036E03+ ATCCACATATACACTACCTTTATCACCAAGAGTTTCAGACCCAGAAATCAAGCTCACATT
JMSF045L01+ ATCCACATATACACTACCTTTATCACCAAGAGTTTCAGACCCAGAAATCAAGCTCACATT
JMSF009C03+ GTTTCAGACCCAGAAATCAAGCTCACATT
JMSF016P07+ ATCCACATATACACTACCTTTATCACCAAGAGTTTCAGACCCAGAAATCAAGCTCACATT
JMSF008J17+ AGACCCAGAANTCAAGCTCACATT
____________________________________________________________
consensus ATCCACATATACACTACCTTTATCACCAAGAGTTTCAGACCCAGAAATCAAGCTCACATT
. : . : . : . : . : . :
JMFF024B15+ GAACACCCCCAAAACCAATATCCACAACCTCATTTGCAAAAACCATGAATGACCCATTGT
JMFF027N13+ GAACACCCCCAAAACCAATATCCACAACCTCATTTGCAAAAACCATGAATGACCCATTGT
JMFF048D22+ GAACACCCCCAAAACCAATATCCACAACCTCATTTGCAAAAACCATGAATGACCCATTGT
JMSF036E03+ GAACACCCCCAAAACCAATATCCACAACCTCATTTGCAAAAACCATGAATGACCCATTGT
JMSF045L01+ GAACACCCCCAAAACCAATATCCACAACCTCATTTGCAAAAACCATGAATGACCCATTGT
JMSF009C03+ GAACACCCCCAAAACCAATATCCACAACCTCATTTGCAAAAACCATGAATGACCCATTGT
JMSF016P07+ GAACACCCCCAAAACCAATATCCACAACCTCATTTGCAAAAACCATGAATGACCCATTGT
JMSF008J17+ GAACACCCCCAAAACCAATATCCACAACCTCATTTGCAAAAACCATGAATGACCCATTGT
____________________________________________________________
consensus GAACACCCCCAAAACCAATATCCACAACCTCATTTGCAAAAACCATGAATGACCCATTGT
. : . : . : . : . : . :
JMFF024B15+ GGGAACTTAACCC
JMFF027N13+ GGGAACTTGACCC
JMFF048D22+ GGGAACT
JMSF036E03+ GGGAACTTGACCCAAGAAGCCCAAGATCTACACAGATCTATTTATGCGGCACTAGTAGTA
JMSF045L01+ GGGAACTTGACCCAAGAAGCCCAAGATCTACACAGATCTATTTATGCGGCACTAGTAGTA
JMSF009C03+ GGGAACTTGACCCAAGAAGCCCAAGATCTACACAGATCTATTTATGCGGCACTAGTAGTA
JMSF016P07+ GGGAACTTGACCCAAGAAGCCCAAGATCTACACAGATCTATTTATGCGGCACTAGTAGTA
JMSF008J17+ GGGAACTTGACCCAAGAAGCCCAAGATCTACACAGATCTATTTATGCGGCACTAGTAGTA
____________________________________________________________
consensus GGGAACTTGACCCAAGAAGCCCAAGATCTACACAGATCTATTTATGCGGCACTAGTAGTA
. : . : . : . : . : . :
JMSF036E03+ AGGGGAAAAGAAAAAAACACCAAAACACATGGCTTGCTTGCTGCCAAACTTGCCATTGGA
JMSF045L01+ AGGGGAAAAGAAAAAAACACCAAAACACATGGCTTGCTTGCTGCCAAACTTGCCATTGGA
JMSF009C03+ AGGGGAAAAGAAAAAAACACCAAAACACATGGCTTGCTTGCTGCCAAACTTGCCATTGGA
JMSF016P07+ AGGGGAAAAGAAAAAAACACCAAAACACATGGCTTGCTTGCTGCCAAACTTGCCATTGGA
JMSF008J17+ AGGGGAAAAGAAAAAAACACCAAAACACATGGCTTGCTTGCTGCCAAACTTGCCATTGGA
____________________________________________________________
consensus AGGGGAAAAGAAAAAAACACCAAAACACATGGCTTGCTTGCTGCCAAACTTGCCATTGGA
. : . : . : . : . : . :
JMSF036E03+ GGGTAAGGTTTAAAGAGACTTT
JMSF045L01+ GGGTAAGGTTTAAAGAGACTTT
JMSF009C03+ GGGTAAGGTTTAAAGAGACTTTAAAATAAAGGATAAAGAGAGGAACAAGTTGTATACTTG
JMSF016P07+ GGGTAAGGTTTAAAGAGACTTTAAAATAAAGGATAAAGAGAGGAACAAGTTGTATACTTG
JMSF008J17+ GGGTAAGGTTTAAAGAGACTTTAAAATAAAGGATAAAGAGAGGAACAAGTTGTATACTTG
____________________________________________________________
consensus GGGTAAGGTTTAAAGAGACTTTAAAATAAAGGATAAAGAGAGGAACAAGTTGTATACTTG
. : . : . : . : . : . :
JMSF009C03+ GAATGAGAAACAAACAAATAAAAATTGAATCTTTATTTTAAAATGAAAC
JMSF016P07+ GAATGAGAAACAAACAAATAAAAATTGAATCTTTATTTTAAAATGAAACAAATTTTTTAG
JMSF008J17+ GAATGAGAAACAAACAAATAAAAATTGAATCTTTATTTTAAAATGAAACAAATTTTTTAG
____________________________________________________________
consensus GAATGAGAAACAAACAAATAAAAATTGAATCTTTATTTTAAAATGAAACAAATTTTTTAG
. : . : . : . : . : . :
JMSF016P07+ AAATTTGGTGCATTATGGGTTTTAGAGATGGAGAGGGGACT
JMSF008J17+ AAATTTGGTGCATTATGGGTTTTAGAGATGGAGAGGGGACTGGGGAAGGAAAGTGCCATC
____________________________________________________________
consensus AAATTTGGTGCATTATGGGTTTTAGAGATGGAGAGGGGACTGGGGAAGGAAAGTGCCATC