| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF046H01 | Sequence | 602 | 013246 (4) | emb|CDP08875.1| | 6e-58 | unnamed protein product [Coffea canephora] | |||||
| JMFF046I20 | Sequence | 555 | 013246 (4) | emb|CDP08875.1| | 1e-47 | unnamed protein product [Coffea canephora] | 109 | 008359 (8) | |||
| JMSF008D14 | Sequence | 333 | 013246 (4) | dbj|BAO02536.1| | 8e-18 | predicted Shaggy-like kinase ortholog [Nicotiana alata] | 740 | 008359 (8) | ref|XP_006339456.1| | 1e-77 | PREDICTED: shaggy-related protein kinase theta-like [Solanum tuberosum] |
| JMSF039D03 | Sequence | 717 | 013246 (4) | emb|CDP08875.1| | 4e-88 | unnamed protein product [Coffea canephora] | 615 | 008359 (8) | emb|CAA11862.1| | 6e-15 | shaggy kinase 7 [Petunia x hybrida] |
This contig is upended
. : . : . : . : . : . :
JMSF039D03+ AAC
____________________________________________________________
consensus AAC
. : . : . : . : . : . :
JMSF039D03+ GACATTAGGATGTTCGAGCATGCGCATAATCTGTAGCTCCCTATTCTNGTATCTTCTGTC
____________________________________________________________
consensus GACATTAGGATGTTCGAGCATGCGCATAATCTGTAGCTCCCTATTCTNGTATCTTCTGTC
. : . : . : . : . : . :
JMSF039D03+ TNGTAGCACCTTCTTTATTGCAACAGCTTCGCCACTTTCGAGACATTTAGCCTGGAAAAC
____________________________________________________________
consensus TNGTAGCACCTTCTTTATTGCAACAGCTTCGCCACTTTCGAGACATTTAGCCTGGAAAAC
. : . : . : . : . : . :
JMFF046I20+ GGACAATACCTGTTTCTG
JMFF046H01+ AAAAGACCCGGTGCCAACCACACGCTCTGCCATATAGGACAATACCTGTTTCTG
JMSF039D03+ AACTCCAAAAGAACCGGTGCCAACCACACGCTCTGCCATATAGGACAATACCTGTTTCTG
____________________________________________________________
consensus AACTCCAAAAGACCCGGTGCCAACCACACGCTCTGCCATATAGGACAATACCTGTTTCTG
. : . : . : . : . : . :
JMFF046I20+ TTCTCCATTCCGACCACCAACAGTAGTTACTATATTCTGGCCCGTTTCTGTTCCATTACC
JMFF046H01+ TTCTCCATTCCGACCACCAACAGTAGTTACTATTATCTGGCCCGTTTCTGTTCCATTACC
JMSF039D03+ TTCTCCATTCCGACCACCAACAGTAGTTACTATTATCTGGCCCGTTTCTGTTCCATTACC
____________________________________________________________
consensus TTCTCCATTCCGACCACCAACAGTAGTTACTATTATCTGGCCCGTTTCTGTTCCATTACC
. : . : . : . : . : . :
JMFF046I20+ GGTAATAACAACGGGTTCCATATCCTTTAGGTTGTTCTGATTATCGGATTTGTCATCTTT
JMFF046H01+ GGTAATAACAACGGGTTCCATATCCTTTAGGTTGTTCTGATTATCGGATTTGTCATCTTT
JMSF039D03+ GGTAATAACAACGGGTTCCATATCCTTTAGGTTGTTCTGATTATCGGATTTGTCATCTTT
____________________________________________________________
consensus GGTAATAACAACGGGTTCCATATCCTTTAGGTTGTTCTGATTATCGGATTTGTCATCTTT
. : . : . : . : . : . :
JMFF046I20+ AATCTTCATTTCGTGCATTTCCTTCGGAAGCTCTTCATATCCCGACTTTTCAGATCTTGC
JMFF046H01+ AATCTTCATTTCGTGCATTTCCTTCGGAAGCTCTTCATATCCCGACTTTTCAGATCTTGC
JMSF039D03+ AATCTTCATTTCGTGCATTTCCTTCGGAAGCTCTTCATATCCCGACTTTTCAGATCTTGC
____________________________________________________________
consensus AATCTTCATTTCGTGCATTTCCTTCGGAAGCTCTTCATATCCCGACTTTTCAGATCTTGC
. : . : . : . : . : . :
JMFF046I20+ TACCAAGGATATGCCAGATGCATCTTCTTGAGACGTAGAAGCAGCTTCGTGCATAGGAGC
JMFF046H01+ TACCAAGGATATGCCAGATGCATCTTCTTGAGACGTAGAAGCAGCTTCGTGCATAGGAGC
JMSF039D03+ TACCAAGGATATGCCAGATGCATCTTCTTGAGACGTAGAAGCAGCTTCGTGCATAGGAGC
JMSF008D14+ TTGAGACGTAGAAGCAGCTTCGTGCATAGGAGC
____________________________________________________________
consensus TACCAAGGATATGCCAGATGCATCTTCTTGAGACGTAGAAGCAGCTTCGTGCATAGGAGC
. : . : . : . : . : . :
JMFF046I20+ AGTAGTGCATATTTCTTCGGACTCGGGTTTGCCGGCAATCCTTTGATCGAAATCTTGTGC
JMFF046H01+ AGTAGTGCATATTTCTTCGGACTCGGGTTTACCGGCAATCCTTTGATCGAAATCTTGTGC
JMSF039D03+ AGTAGTGCATATTTCTTCGGACTCGGGTTTACCGGCAATCCTTTGATCGAAATCTTGTGC
JMSF008D14+ AGTAGTGCATATTTCTTCGGACTCGGGTTTACCGGCAATCCTTTGATCGAAATCTTGTGC
____________________________________________________________
consensus AGTAGTGCATATTTCTTCGGACTCGGGTTTACCGGCAATCCTTTGATCGAAATCTTGTGC
. : . : . : . : . : . :
JMFF046I20+ AACCTTCACTCTCTTTATGCTGGAATCCCCTCCCTGAGGATCTGAAACTGAAGAGCGGCC
JMFF046H01+ AACCTTCACTCTCTTTATGCTGGAATCCCCTCCCTGAGGATCTGAAACTGAAGAGCGGCC
JMSF039D03+ AACCTTCACTCTCTTTATGCTGGAATCCCCTCC---AGGATCTGAAACTGAAGAGCGGCC
JMSF008D14+ AACCTTCACTCTCTTTATGCTGGAATCCCCTCCCTGAGGATCTGAAACTGAAGAGCGGCC
____________________________________________________________
consensus AACCTTCACTCTCTTTATGCTGGAATCCCCTCCCTGAGGATCTGAAACTGAAGAGCGGCC
. : . : . : . : . : . :
JMFF046I20+ AGAAGCAACGCTCTTGAGACGACGCATCACATTCATGTTTTCCGATGCCCCTTTCTCTCT
JMFF046H01+ AGAAGCAACGCTCTTGAGACGACGCATCACATTCATGTTTTCCGATGCCCCTTTCTCTCT
JMSF039D03+ AGAAGCAACGCTCTTGAGACGACGCATCACATTCATGTTTTCCGATGCCCCTTTCTCTCT
JMSF008D14+ AGAAGCAACGCTCTTGAGACGACGCATCACATTCATGTTTTCCGATGCCCCTTTCTCTCT
____________________________________________________________
consensus AGAAGCAACGCTCTTGAGACGACGCATCACATTCATGTTTTCCGATGCCCCTTTCTCTCT
. : . : . : . : . : . :
JMFF046I20+ CCCTTTCAACCAAGAAAACCTTCCCGAATCGTCTGCAATGGAGATTCAAGAAGAGAATGC
JMFF046H01+ CCCTTTCAACCAAGAAAACCTTCCCGAATCGTCTGCAATGGAGATTCAAGAAGAGAATGC
JMSF039D03+ CCCTTTCAACCAAGAAAACCTTCCCGAATCGTCTGCAATGGAGATTCAAGAAGAGAATGC
JMSF008D14+ CCCTTTCAACCAAGAAAACCTTCCCGAATCGTCTGCAATGGAGATTCAAGAAGAGAATGC
____________________________________________________________
consensus CCCTTTCAACCAAGAAAACCTTCCCGAATCGTCTGCAATGGAGATTCAAGAAGAGAATGC
. : . : . : . : . : . :
JMFF046I20+ AGGAGAGAGAAAGAGAAACGGACAGAAAAATATAGAAATATGATGAAAGCTTTTCTC
JMFF046H01+ AGGAGAGAGAAAGAGAAACGGACAGAAAAATATAGAAATATGATGAAAGCTTTTCTC
JMSF039D03+ AGGAGAGAGAAAGAGAAACGGACAGAAAAATATAGAAATATGATGAAAGCTTTTCTC
JMSF008D14+ AGGAGAGAGAAAGAGAAACGGACAGAAAAATATAGAAATATGATGAAAGCTTTTCTCTCC
____________________________________________________________
consensus AGGAGAGAGAAAGAGAAACGGACAGAAAAATATAGAAATATGATGAAAGCTTTTCTCTCC