Contig 013245:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF025C22-                                                              AACTCAAT
rJMSF008C04-                                                         ATCTCAACTCAAT
                      ____________________________________________________________
consensus                                                            ATCTCAACTCAAT
 
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rJMSF025C22-          GGTCAACATACATCGCAAATATTCCACTCCAAAGAACCAAAAGTTAAAGCATGCAGAAAT
rJMSF008C04-          GGTCAACATACATCGCAAATATTCCACTCCAAAGAACCAAAAGTTAAAGCATGCAGAAAT
                      ____________________________________________________________
consensus             GGTCAACATACATCGCAAATATTCCACTCCAAAGAACCAAAAGTTAAAGCATGCAGAAAT
 
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rJMSF025C22-          ACTTGGAAGATAAGTGAGAACAATAAAAACCATACACCACCCTGCTAGAATAAATCATCA
rJMSF008C04-          ACTTGGAAGATAAGTGAGAACAATAAAAACCATACACCACCCTGCTAGAATAAATCATCA
                      ____________________________________________________________
consensus             ACTTGGAAGATAAGTGAGAACAATAAAAACCATACACCACCCTGCTAGAATAAATCATCA
 
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rJMSF025C22-          TCATATAACCCACAAACCACATAACATCCACTGTCAAAAGAACCGAGTTTAAGTAAGATC
rJMSF008C04-          TCATATAACCCACAAACCACATAACATCCACTGTCAAAAGAACCGAGTTTAAGTAAGATC
                      ____________________________________________________________
consensus             TCATATAACCCACAAACCACATAACATCCACTGTCAAAAGAACCGAGTTTAAGTAAGATC
 
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rJMSF025C22-          ATCCTCCTCTAGTTCTTTTGCCTTGATCGATTCCTTCACCCTAAGCAGAAGGGTGGTCCT
rJMSF008C04-          ATCCTCCTCTAGTTCTTTTGCCTTGATCGATTCCTTCACCCTAAGCAGAAGGGTGGTCCT
                      ____________________________________________________________
consensus             ATCCTCCTCTAGTTCTTTTGCCTTGATCGATTCCTTCACCCTAAGCAGAAGGGTGGTCCT
 
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rJMSF025C22-          CCAAGCATCCAGTTGGCTCATGCTGTCAAATTCCTTGACAGCATCAGTGAACTTTGCAAC
rJMSF008C04-          CCAAGCATCCAGTTGGCTCATGCTGTCAAATTCCTTGACAGCATCAGTGAACTTTGCAAC
                      ____________________________________________________________
consensus             CCAAGCATCCAGTTGGCTCATGCTGTCAAATTCCTTGACAGCATCAGTGAACTTTGCAAC
 
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rJMSF025C22-          ATCTTCTTCATCCAATGCAGCAGCCAGATCACTTAGTAGTTTGAACTCCCTTGTCCCTGA
rJMSF008C04-          ATCTTCTTCATCCAATGCAGCAGCCAGATCACTTAGTAGTTTGAACTCCCTTGTCCCTGA
                      ____________________________________________________________
consensus             ATCTTCTTCATCCAATGCAGCAGCCAGATCACTTAGTAGTTTGAACTCCCTTGTCCCTGA
 
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rJMSF025C22-          GAATGATGGATCCAGATCCTGGTATTTCTCTAAAGCATTGTTAATTGCAACAACATCACC
rJMSF008C04-          GAATGATGGATCCAGATCCTGGTATTTCTCTAAAGCATTGTTAATTGCAACAACATCACC
                      ____________________________________________________________
consensus             GAATGATGGATCCAGATCCTGGTATTTCTCTAAAGCATTGTTAATTGCAACAACATCACC
 
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rJMSF025C22-          TTTACATAGTTGGCAAATACCAGCATTAAGAAGATGCCCTCTAACTCCATATTTCAACAG
rJMSF008C04-          TTTACATAGTTGGCAAATACCAGCATTAAGAAGATGCCCTCTAACTCCATATTTCAACAG
JMFF016G13+                     TGGCAAATACCAGCATTAAGAAGATGCCCTCTAACTCCATATTTCAACAG
JMSF025C22+            TTACATAGNTGGCAAATACCAGCATTAAGAAGATGCCCTCTAACTCCATATTTCAACAG
                      ____________________________________________________________
consensus             TTTACATAGTTGGCAAATACCAGCATTAAGAAGATGCCCTCTAACTCCATATTTCAACAG
 
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rJMSF025C22-          GTTGTTACTAACAGATTGCCGTGCTATATCCTCAAATATTTCAATTGCTCTTGGATATTT
rJMSF008C04-          GTTGTTACTAACAGATTGCCGTGCTATATCCTCAAATATTTCAATTGCTCTTGGATATTT
JMFF016G13+           GTTGTTACTAACAGATTGCCGTGCTATATCCTCAAATATTTCAATTGCTCTTGGATATTT
JMSF025C22+           GTTGTTACTAACAGATTGCCGTGCTATATCCTCAAATATTTCAATTGCTCTNGGATATTT
                      ____________________________________________________________
consensus             GTTGTTACTAACAGATTGCCGTGCTATATCCTCAAATATTTCAATTGCTCTTGGATATTT
 
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rJMSF025C22-          TTCTAACTGAGCAGAAAATTGTGCAATTTTCTGCTTGCACTGATTTGCAGTTGTGGATAC
rJMSF008C04-          TTCTAACTGAGCAGAAAATTGTGCAATTTTCTGCTTGCACTGATTTGCAGTTGTGGATAC
JMFF016G13+           TTCTAACTGAGCAGAAAATTGTGCAATTTTCTGCTTGCACTGATTTGCAGTTGTGGATAC
JMSF025C22+           TTCTAACTGAGCAGAAAATTGTGCAATTTTCTGCTTGCACTGATTTGCAGTTGTGGATAC
                      ____________________________________________________________
consensus             TTCTAACTGAGCAGAAAATTGTGCAATTTTCTGCTTGCACTGATTTGCAGTTGTGGATAC
 
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rJMSF025C22-          ATCCTCTGCTTGGAAAAGATCAGCTGCTTTTTCATAGTACGCAATGGCCTGTTCAAGGTT
rJMSF008C04-          ATCCTCTGCTTGGAAAAGATCAGCTGCTTTTTCATAGTACGCAATGGCCTGTTCAAGGTT
JMFF016G13+           ATCCTCTGCTTGGAAAAGATCAGCTGCTTTTTCATAGTACGCAATGGCCTGTTCAAGGTT
JMSF025C22+           ATCCTCTGCTTGGAAAAGATCAGCTGCTTTTTCATAGTACGCAATGGCCTGTTCAAGGTT
                      ____________________________________________________________
consensus             ATCCTCTGCTTGGAAAAGATCAGCTGCTTTTTCATAGTACGCAATGGCCTGTTCAAGGTT
 
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rJMSF025C22-          TTGCTCTTGCTCATATATTTCAGCAATTTCCTTGTAATATCTTGNCGACATATTCAGCCT
rJMSF008C04-          TTGCTCTTGCTCATATATTTCAGCAATTTCCTTGTAATATCTTGNCGACATATTCAGCCT
JMFF016G13+           TTGCTCTTGCTCATATATTTCAGCAATTTCCTTGTAATATCTTGCCGACATATTCAGCCT
JMSF025C22+           TTGCTCTTGCTCATATATTTCAGCAATTTCCTTGTAATATCTTGCCGACATATTCAGCCT
                      ____________________________________________________________
consensus             TTGCTCTTGCTCATATATTTCAGCAATTTCCTTGTAATATCTTGCCGACATATTCAGCCT
 
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rJMSF025C22-          CCCAATTT                                                    
rJMSF008C04-          CCCAATTTCCAGAAATAAGTTTACTGCATGTTCTAGA                       
JMFF016G13+           CCCAATTTCCAGAAATAAGTTTACTGCATGTTCTAGACAAGATACAGCCTCTCTAGTATT
JMSF025C22+           CCCAATTTCCAGAAATAAGTTTACTGCATGTTCTAGACAAGATACAGC--CTCTAGTATT
JMSF008C04+                                 ACTGCATGTTCTAGACAAGATACAGCCTCTCTAGTATT
                      ____________________________________________________________
consensus             CCCAATTTCCAGAAATAAGTTTACTGCATGTTCTAGACAAGATACAGCCTCTCTAGTATT
 
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JMFF016G13+           TATCTTCTTGTAGTTGTGACCAGCATCAGCAAATGCACCAGCAGCCTCATGTTTACTGTC
JMSF025C22+           TATCTTCTTGTAGTTGTGACCAGCATCAGCAAATGCACCAGCAGCCTCATGTTTACTGTC
JMSF008C04+           TATCTTCTGGTAGTTGTGACCAGCATCAGCAAATGCACCAGCAGCCTCATGTTTACTGTC
                      ____________________________________________________________
consensus             TATCTTCTTGTAGTTGTGACCAGCATCAGCAAATGCACCAGCAGCCTCATGTTTACTGTC
 
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JMFF016G13+           CAGCTTCAAATGACAATTGGCCAACTTGACATATGTCGCTCCAGCTTGATCCCATGACTT
JMSF025C22+           CAGCTTCAAATGACAATTGGCCAACTTGACATATGTCGCTCCAGCTTGATCCCATGACTT
JMSF008C04+           CAGCTTCAAATGACAATTGGCCAACTTGACATATGTCGCTCCAGCTTGATCCCATGACTT
                      ____________________________________________________________
consensus             CAGCTTCAAATGACAATTGGCCAACTTGACATATGTCGCTCCAGCTTGATCCCATGACTT
 
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JMFF016G13+           AGCGAGCTTGAAGCAATTGGCGGCTTTCTCGAAGAAATCAGCGGCGTCTTCATATTTGGA
JMSF025C22+           AGCGAGCTTGAAGCAATTGGCGGCTTTCTCGAAGAAATCAGCGGCGTCTTCATATTTGGA
JMSF008C04+           AGCGAGCTTGAAGCAATTGGCGGCTTTCTCGAAGAAATCAGCGGCGTCTTCATATTTGGA
                      ____________________________________________________________
consensus             AGCGAGCTTGAAGCAATTGGCGGCTTTCTCGAAGAAATCAGCGGCGTCTTCATATTTGGA
 
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JMFF016G13+           GCTGAAGAGCGCCCATCCGCTGAGCTTCTTCTCGGCTTTCTTCTCGAATTCTTCTCCTCT
JMSF025C22+           GCTGAAGAGCGCCCATCCGCTGAGCTTCTTCTCGGCTTTCTTCTCGAATTCTTCTCCTCT
JMSF008C04+           GCTGAAGAGCGCCCATCCGCTGAGCTTCTTCTCGGCTTTCTTCTCGAATTCTTCTCCTCT
                      ____________________________________________________________
consensus             GCTGAAGAGCGCCCATCCGCTGAGCTTCTTCTCGGCTTTCTTCTCGAATTCTTCTCCTCT
 
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JMFF016G13+           GGCAACCTGATCACCCATTGTGGTCTGTGAGGGAGCAAAAATGAGAG             
JMSF025C22+           GGCAACCTGATCACCCATTGTGGTCTGTGAGGGAGCAAAAATGAGAGATGGAAACGTT  
JMSF008C04+           GGCAACCTGATCACCCATTGTGGTCTGTGAGGGAGCAAAAATGAGAGATGGAAACGTTAC
                      ____________________________________________________________
consensus             GGCAACCTGATCACCCATTGTGGTCTGTGAGGGAGCAAAAATGAGAGATGGAAACGTTAC