Contig 013244:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF007P24-                                         TTATATCTTCATCATACTTAAAAGTAAAT
                      ____________________________________________________________
consensus                                            TTATATCTTCATCATACTTAAAAGTAAAT
 
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rJMSF007P24-          ATTCATTACACTTGAAAAACAAAACCAAAAAAATTATACACCAATTGCTGTTGGCACATT
rJMSF007B21-                               AAACCAAAAAAATTATACACCAATTGCTGTTGGCACATT
                      ____________________________________________________________
consensus             ATTCATTACACTTGAAAAACAAAACCAAAAAAATTATACACCAATTGCTGTTGGCACATT
 
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rJMSF007P24-          GATATTTGAACAGATAGAGTCATAGAGATACTGAACCCACCCCTCATGGGAATTCAAAAT
rJMSF007B21-          GATATTTGAACAGATAGAGTCATAGAGATACTGAACCCACCCCTCATGGGAATTCAAAAT
                      ____________________________________________________________
consensus             GATATTTGAACAGATAGAGTCATAGAGATACTGAACCCACCCCTCATGGGAATTCAAAAT
 
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rJMSF007P24-          GACATATTTCCAAACAAAGGTTAAGGCTGGTTTAAAAGTAAACTAAAAAGGCATTAAATC
rJMSF007B21-          GACATATTTCCAAACAAAGGTTAAGGCTGGTTTAAAAGTAAACTAAAAAGGCATTAAATC
                      ____________________________________________________________
consensus             GACATATTTCCAAACAAAGGTTAAGGCTGGTTTAAAAGTAAACTAAAAAGGCATTAAATC
 
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rJMSF007P24-          TGAACAATAAATAGCAGATCATGTTAGGGGAATGCCCCATCTAATTGTGTGCCCTATACA
rJMSF007B21-          TGAACAATAAATAGCAGATCATGTTAGGGGAATGCCCCATCTAATTGTGTGCCCTATACA
                      ____________________________________________________________
consensus             TGAACAATAAATAGCAGATCATGTTAGGGGAATGCCCCATCTAATTGTGTGCCCTATACA
 
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rJMSF007P24-          ATGTGAGTAAACCAACCACCTGATTTACAAAAAGTATTTCATCCGGTCGTCTCTTCTCAT
rJMSF007B21-          ATGTGAGTAAACCAACCACCTGATTTACAAAAAGTATTTCATCCGGTCGTCTCTTCTCAT
                      ____________________________________________________________
consensus             ATGTGAGTAAACCAACCACCTGATTTACAAAAAGTATTTCATCCGGTCGTCTCTTCTCAT
 
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rJMSF007P24-          GGCATTGTAAACGGCTTGAACCTGTTCACTAGAAACAACATGAATGGGTCCAATATTTAC
rJMSF007B21-          GGCATTGTAAACGGCTTGAACCTGTTCACTAGAAACAACATGAATGGGTCCAATATTTAC
                      ____________________________________________________________
consensus             GGCATTGTAAACGGCTTGAACCTGTTCACTAGAAACAACATGAATGGGTCCAATATTTAC
 
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rJMSF007P24-          TGAAACGTACTTGCCTCCCGAGGATATCTTCTGCCTCACTTGACCCTGAGGGATAGGCTG
rJMSF007B21-          TGAAACGTACTTGCCTCCCGAGGATATCTTCTGCCTCACTTGACCCTGAGGGATAGGCTG
                      ____________________________________________________________
consensus             TGAAACGTACTTGCCTCCCGAGGATATCTTCTGCCTCACTTGACCCTGAGGGATAGGCTG
 
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rJMSF007P24-          TTGAATAACTGATTCTACAGCAACTACCATAGCCTGCACAAAATCATCACCTCCAGTACC
rJMSF007B21-          TTGAATAACTGATTCTACAGCAACTACCATAGCCTGCACAAAATCATCACCTCCAGTACC
                      ____________________________________________________________
consensus             TTGAATAACTGATTCTACAGCAACTACCATAGCCTGCACAAAATCATCACCTCCAGTACC
 
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rJMSF007P24-          AATAGCTGTAAACCCTCTTTCGGTTGGGTAGGAATTCACCTTCTTATCCAAAGCAAGCCA
rJMSF007B21-          AATAGCTGTAAACCCTCTTTCGGTTGGGTAGGAATTCACCTTCTTATCCAAAGCAAGCCA
                      ____________________________________________________________
consensus             AATAGCTGTAAACCCTCTTTCGGTTGGGTAGGAATTCACCTTCTTATCCAAAGCAAGCCA
 
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rJMSF007P24-          TTCATTGGTGGAATCATCATGCGTAGTGCCTCCAATAACCATATTCGTAGTCTGGCCAAC
rJMSF007B21-          TTCATTGGTGGAATCATCATGCGTAGTGCCTCCAATAACCATATTCGTAGTCTGGCCAAC
                      ____________________________________________________________
consensus             TTCATTGGTGGAATCATCATGCGTAGTGCCTCCAATAACCATATTCGTAGTCTGGCCAAC
 
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rJMSF007P24-          CCTCCCTTCTGTCTTGGACACTTCTGAAATCGCCTTGAGAACTGCTTCTTGAGGAGGATT
rJMSF007B21-          CCTCCCTTCTGTCTTGGACACTTCTGAAATCGCCTTGAGAACTGCTTCTTGAGGAGGATT
JMSF007B21+                    TGTCTTGGACACTTCTGAAATCGCCTTGAGAACTGCTTCTTGAGGAGGATT
JMSF007P24+                                              TGAGAACTGCTTCTTGAGGAGGATT
                      ____________________________________________________________
consensus             CCTCCCTTCTGTCTTGGACACTTCTGAAATCGCCTTGAGAACTGCTTCTTGAGGAGGATT
 
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rJMSF007P24-          TTGCTCAAAATCTTCGGGAGATGACGATGGGGTTTCATTATTGGAGCAATTCAGA     
rJMSF007B21-          TTGCTCAAAATCTTCGGGAGATGACGATGGGGTTTCATTATTGGAGCAATTCAGAGGCTG
JMSF007B21+           TTGCTCAAAATCTTCGGGAGATGACGATGGGGTTTCATTATTGGAGCAATTCAGAGGCTG
JMSF007P24+           TTGCTCAAAATCTTCGGGAGATGACGATGGGGTTTCATTATTGGAGCAATTCAGAGGCTG
                      ____________________________________________________________
consensus             TTGCTCAAAATCTTCGGGAGATGACGATGGGGTTTCATTATTGGAGCAATTCAGAGGCTG
 
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rJMSF007B21-          AGTTCTTCTTG                                                 
JMSF007B21+           AGTTCTTCTTGGGAACCTCGTATAATTGCTTTGGGGCCTTTATGAGCTTACAACCACAAC
JMSF007P24+           AGTTCTTCTTGGGAACCTCGTATAA-TACTTTGGGGCCTTTATGAGCTTACAACCACAAC
                      ____________________________________________________________
consensus             AGTTCTTCTTGGGAACCTCGTATAATTGCTTTGGGGCCTTTATGAGCTTACAACCACAAC
 
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JMSF007B21+           GCAAATGGGGCGGTGAGAGGTTTTGGGTCAAAAAAAAGGGCGCGGAGAAGGGGGGTGTCT
JMSF007P24+           GCAAATGGGGCGGTGAGAGGTTTTGGGTCAAAAAAAAGGGCGCGGAGAAGGGGGGTGTCT
                      ____________________________________________________________
consensus             GCAAATGGGGCGGTGAGAGGTTTTGGGTCAAAAAAAAGGGCGCGGAGAAGGGGGGTGTCT
 
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JMSF007B21+           TTCTAGGCAGAGGTCGCCATGGCTCTGCTATGAAGACAGCAGCTCTGAGCACGGTCTTGG
JMSF007P24+           TTCTAGGCAGAGGTCGCCATGGCTCTGCTATGAAGACAGCAGCTCTGAGCACGGTCTTGG
                      ____________________________________________________________
consensus             TTCTAGGCAGAGGTCGCCATGGCTCTGCTATGAAGACAGCAGCTCTGAGCACGGTCTTGG
 
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JMSF007B21+           AGGCCATTGCGGTTTGCGGAAGATACCTCCCTCCCTGT                      
JMSF007P24+           AGGCCATTGCGGTTTGCGGAAGATACCTCCCTCCCTGTGTTCTAATGACTAGATATTTCC
                      ____________________________________________________________
consensus             AGGCCATTGCGGTTTGCGGAAGATACCTCCCTCCCTGTGTTCTAATGACTAGATATTTCC