Contig 013242:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS095C05Sequence620013242 (2)ref|XP_004250342.1|1e-88PREDICTED: protein PIR isoform X1 [Solanum lycopersicum]
JMSF007L16Sequence377013242 (2)emb|CDP12445.1|3e-27unnamed protein product [Coffea canephora]766024475ref|XP_010312794.1|2e-110PREDICTED: protein PIR isoform X3 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFS095C05+                        TTATAGTGGGGCCATTTATTCGTCTTTCAGGCCTTGAAAAACGCTGC
                      ____________________________________________________________
consensus                          TTATAGTGGGGCCATTTATTCGTCTTTCAGGCCTTGAAAAACGCTGC
 
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JMFS095C05+           ATATCAGCTGCCAACTTAGACGCTGCTGATGCCTGCCATCGCTGAATTTCACGCAGACGG
                      ____________________________________________________________
consensus             ATATCAGCTGCCAACTTAGACGCTGCTGATGCCTGCCATCGCTGAATTTCACGCAGACGG
 
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JMFS095C05+           CTCATTTCCAAATCCAAAACTTGATAAGTTTCTAGATATAAGTCGGCCTGACTTTGCTTC
                      ____________________________________________________________
consensus             CTCATTTCCAAATCCAAAACTTGATAAGTTTCTAGATATAAGTCGGCCTGACTTTGCTTC
 
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JMFS095C05+           ATAGAATCTGGTAGCTGAGGAAGAGCTTTTACACAACTCCGATATGTATAGAGCACAGAT
                      ____________________________________________________________
consensus             ATAGAATCTGGTAGCTGAGGAAGAGCTTTTACACAACTCCGATATGTATAGAGCACAGAT
 
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JMFS095C05+           GTGATTTCCTTTCCTTCTTGAATAAGTGCATCCAGCTGATTAATAGCTTTAGTGTCTTCA
JMSF007L16+                                                      TAGCTTTAGTGTCTTCA
                      ____________________________________________________________
consensus             GTGATTTCCTTTCCTTCTTGAATAAGTGCATCCAGCTGATTAATAGCTTTAGTGTCTTCA
 
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JMFS095C05+           GACAGAGACAGCCGATATGCAGACACATCACTATACTCAATTGGGCTACTGGTAGCGCCT
JMSF007L16+           GACAGAGACAGCCGATATGCAGACACATCACTATACTCAATTGGGCTACTGGTAGCGCCT
                      ____________________________________________________________
consensus             GACAGAGACAGCCGATATGCAGACACATCACTATACTCAATTGGGCTACTGGTAGCGCCT
 
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JMFS095C05+           CCTTCAACTGAAACCCAAAACCCTGGTCCTTGAACCTCTGGTTGATCATCCTCTAATGAG
JMSF007L16+           CCTCCAACTGAAACCCAAAACCCTGGTCCTTGAACCTCTGGTTGATCATCCTCTAATGAG
                      ____________________________________________________________
consensus             CCTTCAACTGAAACCCAAAACCCTGGTCCTTGAACCTCTGGTTGATCATCCTCTAATGAG
 
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JMFS095C05+           AATGTGGAGAGAGCAGCAATGGCTTCTTCAATGGGGACTGCCATTGTGATTGTAATTTTG
JMSF007L16+           AATGTGGAGAGAGCAGCAATGGCTTCTTCAATGGGGACTGCCATTGTGATTGTAATTTTG
                      ____________________________________________________________
consensus             AATGTGGAGAGAGCAGCAATGGCTTCTTCAATGGGGACTGCCATTGTGATTGTAATTTTG
 
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JMFS095C05+           CTTCAGTTCCTCGATCTCTGAGATAAACCAACTATTTTCTGTAGTATTTTCCGGATCACG
JMSF007L16+           CTTCAGTTCCTCGATCTCTGAGATAAACCAACTATTTTCTGTAGTATTTTCCGGATCACG
                      ____________________________________________________________
consensus             CTTCAGTTCCTCGATCTCTGAGATAAACCAACTATTTTCTGTAGTATTTTCCGGATCACG
 
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JMFS095C05+           GGAAGAAATTATAGCATTTCTTTAGCGTGGGCTGAAATTCAAGAAGTTCATGGAGCTAGG
JMSF007L16+           GGAAGAAATTATAGCATTTCTTTAGCGTGGGCTGAAATTCAAGAAGTTCATGGAGCTAGG
                      ____________________________________________________________
consensus             GGAAGAAATTATAGCATTTCTTTAGCGTGGGCTGAAATTCAAGAAGTTCATGGAGCTAGG
 
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JMFS095C05+           CAGCTAGCTGCGTTGAAATGCGAAGGAAGGAGA                           
JMSF007L16+           CAGCTAGCTGCGTTGAAATGCGAAGGAAGGAGAGTATTCCGCTCTCGGCTCAGTCGGCTC
                      ____________________________________________________________
consensus             CAGCTAGCTGCGTTGAAATGCGAAGGAAGGAGAGTATTCCGCTCTCGGCTCAGTCGGCTC