Contig 013241:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN003D03Sequence608013241 (3)ref|XP_009794645.1|2e-74PREDICTED: pathogenesis-related protein STH-2-like [Nicotiana sylvestris]
JMFN013P06Sequence627013241 (3)ref|XP_009794645.1|3e-73PREDICTED: pathogenesis-related protein STH-2-like [Nicotiana sylvestris]
JMSF007I19Sequence381013241 (3)ref|XP_009591007.1|5e-40PREDICTED: pathogenesis-related protein STH-2-like [Nicotiana tomentosiformis]734007032 (8)ref|XP_009781170.1|2e-102PREDICTED: uncharacterized acetyltransferase At3g50280 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN013P06+                     TTAAAGATGGTACACAAACTAAGCACACCCAATATAGATAGTAATAAAGG
                      ____________________________________________________________
consensus                       TTAAAGATGGTACACAAACTAAGCACACCCAATATAGATAGTAATAAAGG
 
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JMFN003D03+                     ATTAAAACCCAATCAAGTTGATTAGGCACAAACACTTGGGTTTGCAAGCA
JMFN013P06+           ACAATAATTCATTAAAACCCAATCAAGTTGATTAGGCACAAACACTTGGGTTTGCAAGCA
                      ____________________________________________________________
consensus             ACAATAATTCATTAAAACCCAATCAAGTTGATTAGGCACAAACACTTGGGTTTGCAAGCA
 
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JMFN003D03+           AGTATTGTTCGACCACCTTGAAAAGCTCCATGGCCTTGTCCGCCCCTTCCTTAATTTCCT
JMFN013P06+           AGTATTGTTCGACCACCTTGAAAAGCTCCATGGCCTTGTCCACCCCTTCCTTAATTTCCT
                      ____________________________________________________________
consensus             AGTATTGTTCGACCACCTTGAAAAGCTCCATGGCCTTGTCCGCCCCTTCCTTAATTTCCT
 
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JMFN003D03+           CTTCTTTGAGAACATAGTCACCCTTGGTGTGATACTTGATTGTGTTCTTGCAAACGCAGC
JMFN013P06+           CTTCTTTGAGAACATAGTCACCCTTGGTGTGATACTTGCTTGTGTTCTTGCAAACGCAGC
                      ____________________________________________________________
consensus             CTTCTTTGAGAACATAGTCACCCTTGGTGTGATACTTGCTTGTGTTCTTGCAAACGCAGC
 
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JMFN003D03+           CGCCATTGCCGCTAGCTTCAATCTTGGCCTCATAATCTACGGATTCCAGCTTGTCTCCCA
JMFN013P06+           CGCCATTGCCGCTCGCTTCAATCTTGGCCTCATAATCTACGGATTCCAGCTTGTCTCCCA
JMSF007I19+                                                  CGGATTCCAGCTTGTCTCCCA
                      ____________________________________________________________
consensus             CGCCATTGCCGCTCGCTTCAATCTTGGCCTCATAATCTACGGATTCCAGCTTGTCTCCCA
 
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JMFN003D03+           TCACATCTCCCTCCACCAACGAGTACTTGCAGATCAAGTTATCCACGTCCACCACTTCAA
JMFN013P06+           TCACATCTCCCTCCACCAACGAGTACTTGCAGATCAAGTTATCCACGTCCACCACTTCAA
JMSF007I19+           TCACATCTCCCTCCACCAACGAGTACTTGCAGATCAAGTTATCCACGTCCACCACTTCAA
                      ____________________________________________________________
consensus             TCACATCTCCCTCCACCAACGAGTACTTGCAGATCAAGTTATCCACGTCCACCACTTCAA
 
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JMFN003D03+           TCTTGTGTTTCACGTACTTTAAGTTATCTCCTTCGAGGAAGTTCATCTTCTTGATGGTTC
JMFN013P06+           TCTTGTGTTTCACGTACTTTAAGCTATCTCCTTCGAGGTAGTTCATCTTCTTGATGGTTC
JMSF007I19+           TCTTGTGTTTCACGTACTTTAAGTTATCTCCTTCGAGGAAGTTCATCTTCTTGATGGTTC
                      ____________________________________________________________
consensus             TCTTGTGTTTCACGTACTTTAAGTTATCTCCTTCGAGGAAGTTCATCTTCTTGATGGTTC
 
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JMFN003D03+           CGGCACCACTACCATCACCATGAACAATTTCGATGCTCTTTATGACCTGTGGCATCACCT
JMFN013P06+           CAGCACCACTACCCTCACCATGAACAATTTCGATGCTCTTTATGATCTGTGGCATCACCT
JMSF007I19+           CGGCACCACTACCATCACCATGAACAATTTCGATGCTCTTTATGACCTGTGGCATCACCT
                      ____________________________________________________________
consensus             CGGCACCACTACCATCACCATGAACAATTTCGATGCTCTTTATGACCTGTGGCATCACCT
 
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JMFN003D03+           TTGGCAAGAGGTTGTCTGAGTCCACATACAGAGCCTTGAACATCCTAGGAGCTGCAACTG
JMFN013P06+           TTGGCAAGAGGTTGTCTGAGTCCACATACAGAGCCTTGAACATCCTAGGAGCTGCAACTG
JMSF007I19+           TTGGCAAGAGGTTGTCTGAGTCCACATACAGAGCCTTGAACATCCTAGGAGCTGCAACTG
                      ____________________________________________________________
consensus             TTGGCAAGAGGTTGTCTGAGTCCACATACAGAGCCTTGAACATCCTAGGAGCTGCAACTG
 
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JMFN003D03+           AAGTTGCCACTTCATGGGTATAGGTAGCCACGCCCATAGTTCAGTGCTTTTTGCTTAGTT
JMFN013P06+           AAGTTGCCACTTCATGGGTATAGGTAGCCACTCCCAT-----AGTGTTTTTTGCTTAGTT
JMSF007I19+           AAGTTGCCACTTCATGGGTATAGGTAGCCACGCCCATAGTTCAGTGCTTTTTGCTTAGTT
                      ____________________________________________________________
consensus             AAGTTGCCACTTCATGGGTATAGGTAGCCACGCCCATAGTTCAGTGCTTTTTGCTTAGTT
 
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JMFN003D03+           TAATAAAACTAAATATTTGAAGAGATTAAGGTTTGG                        
JMFN013P06+           TAATAAAACTAAATGTTTGAAGAGATTAAGGTTTGG                        
JMSF007I19+           TAATAAAACTAAATATTTGAAGAGATTAAGGTTTGGGAGAATGTTTAGTATTGAGCTGTC
                      ____________________________________________________________
consensus             TAATAAAACTAAATATTTGAAGAGATTAAGGTTTGGGAGAATGTTTAGTATTGAGCTGTC