Contig 013240:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS142A05+                  TGGTTGCCAAGACTGGGGACAACCTTAGGAACAGCAGGGGGAGTGACCATATT
                      ____________________________________________________________
consensus                    TGGTTGCCAAGACTGGGGACAACCTTAGGAACAGCAGGGGGAGTGACCATATT
 
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rJMSF007G11-                                                                   AAA
JMFS142A05+           GGTAGCTGAAGATTCAGCAGGTTTTGGAGACACCAAGGTGGGAGTATTGTTGTATGAAAA
JMFN038E13+                                                                    AAA
                      ____________________________________________________________
consensus             GGTAGCTGAAGATTCAGCAGGTTTTGGAGACACCAAGGTGGGAGTATTGTTGTATGAAAA
 
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rJMSF007G11-          GATGTTGTTGGGGTTGTGTGTGGTGTTTCCTCCTTTGGCCAAAACCATAATTTCCTTAAC
JMFS142A05+           GATGTTGTTGGGGTTGTGTGTGGTGTTTCCTCCTTTGGCCAAAACCATAATTTCCTTAAC
JMFN038E13+           GATGTTGTTGGGGTTGTGTGTGGTGTTTCCTCCTTTGGCCAAAACCATAATTTCCTTAAC
                      ____________________________________________________________
consensus             GATGTTGTTGGGGTTGTGTGTGGTGTTTCCTCCTTTGGCCAAAACCATAATTTCCTTAAC
 
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rJMSF007G11-          CTTCTCTGCTGGAAAATCATTGAACACAAGCACCTGACCACCATAGAAAATTGTCATCTG
JMFS142A05+           CTTCTCTGCTGGAAAATCATTGAACACAAGCACCTGACCACCATAGAAAATTGTCATCTG
JMFN038E13+           CTTCTCTGCTGGAAAATCATTGAACACAAGCACCTGACCACCATAGAAAATTGTCATCTG
                      ____________________________________________________________
consensus             CTTCTCTGCTGGAAAATCATTGAACACAAGCACCTGACCACCATAGAAAATTGTCATCTG
 
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rJMSF007G11-          TGACTTCTCAGTCTCTGCCTTTGCCACACTTGAATCAGTCTTCTTAGTGGCCTCTTCTTT
JMFS142A05+           TGACTTCTCAGTCTCTGCCTTTGCCACACTTGAATCAGTCTTCTTAGTGGCCTCTTCTTT
JMFN038E13+           TGACTTCTCAGTCTCTGCCTTTGCCACACTTGAATCAGTCTTCTTAGTGGCCTCTTCTTT
                      ____________________________________________________________
consensus             TGACTTCTCAGTCTCTGCCTTTGCCACACTTGAATCAGTCTTCTTAGTGGCCTCTTCTTT
 
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rJMSF007G11-          GGTAAAGTTAGGGAACAAGTTCCCGGGTTTGGGTCCAGAATTCTGACCTGATTTCT    
JMFS142A05+           GGTAAAGTTAGGGAACAAGTTCCCGGGTTTGGGTCCAGAATTCTGACCTGATTTCTCAAT
JMFN038E13+           GGTAAAGTTAGGGAACAAGTTCCCGGGTTTGGGTCCAGAATTCTGACCTGATTTCTCAAT
                      ____________________________________________________________
consensus             GGTAAAGTTAGGGAACAAGTTCCCGGGTTTGGGTCCAGAATTCTGACCTGATTTCTCAAT
 
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JMFS142A05+           CATGGGCAACAGATTCATCGTCTGTGCTGCTGTCCCAGAACCTTCAAGATTGCGGGAAAT
JMFN038E13+           CATGGGCAACAGATTCATCGTCTGTGCTGCTGTCCCAGAACCTTCAAGATTGCGGGAAAT
                      ____________________________________________________________
consensus             CATGGGCAACAGATTCATCGTCTGTGCTGCTGTCCCAGAACCTTCAAGATTGCGGGAAAT
 
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JMFS142A05+           TCCGAGACTGAGATCACCAAAAGAGCCCTTTTCCTTCAAATACTGGCTCAGCAGAGTACA
JMFN038E13+           TCCGAGACTGAGATCACCAAAAGAGCCCTTTTCCTTCAAATACTGGCTCAGCAGAGTACA
JMSF007G11+            CCGAGACTGAGATCACCAAAAGAGCCCTTTTCCTTCAAATACTGGCTCAGCAGAGTACA
                      ____________________________________________________________
consensus             TCCGAGACTGAGATCACCAAAAGAGCCCTTTTCCTTCAAATACTGGCTCAGCAGAGTACA
 
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JMFS142A05+           GGTGTGAGAGAAGTTGGACTTCTGGCCGGAGGGTCTCCCGGAATCCACAATCTCCGACGA
JMFN038E13+           GGTGTGAGAGAAGTTGGACTTCTGGCCGGAGGGTCTCCCGGAATCCACAATCTCCGACGA
JMSF007G11+           GGTGTGAGAGAAGTTGGACTTCTGGCCGGAGGGTCTCCCGGAATCCACAATCTCCGACGA
                      ____________________________________________________________
consensus             GGTGTGAGAGAAGTTGGACTTCTGGCCGGAGGGTCTCCCGGAATCCACAATCTCCGACGA
 
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JMFS142A05+           ACCCATCTCTTCCCGGCGGCGTTTCAAGCTAGCTATTGTTTCTCTCCAAAGCCTAGTACT
JMFN038E13+           ACCCATCTCTTCCCGGCGGCGTTTCAAGCTAGCTATTGTTTCTCTCCAAAGCCTAGTACT
JMSF007G11+           ACCCATCTCTTCCCGGCGGCGTTTCAAGCTAGCTATTGTTTCTCTCCAGAGCCTAGTACT
                      ____________________________________________________________
consensus             ACCCATCTCTTCCCGGCGGCGTTTCAAGCTAGCTATTGTTTCTCTCCAAAGCCTAGTACT
 
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JMFS142A05+           TTCCAAACCCAGAATACTTT                                        
JMFN038E13+           TTCCAAACCCAGAATACTTTTCTTCCGCAAAGCCTAGTCTGCTCGTTCAATCGTACACGT
JMSF007G11+           TTCCAAACCCAGAATACTTTTCTTCCGCAAAGCCTAGTCTGCTCGTTCAATCGTACACGT
                      ____________________________________________________________
consensus             TTCCAAACCCAGAATACTTTTCTTCCGCAAAGCCTAGTCTGCTCGTTCAATCGTACACGT
 
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JMFN038E13+           CTCCTTTATATTCTTAAATTATCGGAGAGGAGGCGATGGTGGGCGGCGGTTAAG      
JMSF007G11+           CTCCTTTATATTCTTAAATTATCGGAGAGGAGGCGATGGTGGGCGGCGGTTAAGGTTGGC
                      ____________________________________________________________
consensus             CTCCTTTATATTCTTAAATTATCGGAGAGGAGGCGATGGTGGGCGGCGGTTAAGGTTGGC