| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS008D10 | Sequence | 621 | 013235 (4) | ref|XP_011082723.1| | 7e-55 | PREDICTED: E3 ubiquitin-protein ligase MBR1 [Sesamum indicum] ref|XP_011082724.1 | |||||
| JMSF006H02 | Sequence | 407 | 013235 (4) | ref|XP_011082723.1| | 6e-22 | PREDICTED: E3 ubiquitin-protein ligase MBR1 [Sesamum indicum] ref|XP_011082724.1 | 378 | 010017 (3) | emb|CDP05971.1| | 1e-11 | unnamed protein product [Coffea canephora] |
| JMSF010K16 | Sequence | 339 | 013235 (4) | ref|XP_011082723.1| | 8e-18 | PREDICTED: E3 ubiquitin-protein ligase MBR1 [Sesamum indicum] ref|XP_011082724.1 | 755 | 010017 (3) | emb|CDP05971.1| | 5e-67 | unnamed protein product [Coffea canephora] |
| JMSF032O13 | Sequence | 671 | 013235 (4) | ref|XP_009596539.1| | 198 | PREDICTED: uncharacterized protein LOC104092609 [Nicotiana tomentosiformis] ref| | 733 | 010017 (3) | emb|CDP05971.1| | 8e-64 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFS008D10+ AA
JMSF032O13+ GGCGACTGCAGAACTAGAACCCACCATAGAA
____________________________________________________________
consensus GGCGACTGCAGAACTAGAACCCACCATAGAA
. : . : . : . : . : . :
JMFS008D10+ TGATGGTACTGGAAATTCATGGGGATTCCTTCAGCATTCTTTCTCTTAAATAAGCCTCTA
JMSF032O13+ TGATGGTACTGGAAATTCATGGGGATTCCTTCAGCATTCTTTCTCTTAAATAAGCCTCTA
____________________________________________________________
consensus TGATGGTACTGGAAATTCATGGGGATTCCTTCAGCATTCTTTCTCTTAAATAAGCCTCTA
. : . : . : . : . : . :
JMFS008D10+ ACACCATCAGCATAAGGGATATTCCTTCCATAACCATCTGTGTGAATTCCAACCACGCCT
JMSF032O13+ ACACCATCAGCATAAGGGATATTCCTTCCATAACCATCTGTGTGAATTCCAACCACGCCT
____________________________________________________________
consensus ACACCATCAGCATAAGGGATATTCCTTCCATAACCATCTGTGTGAATTCCAACCACGCCT
. : . : . : . : . : . :
JMFS008D10+ TGAGCGGTTGTGAATGGGAGATGATCATGTGCTCCATGGATTACAGGAGTTGGGAATTCT
JMSF032O13+ TGAGCGGTTGTGAATGGGAGATGATCATGTGCTCCATGGATTACAGGAGTTGGGAATTCT
____________________________________________________________
consensus TGAGCGGTTGTGAATGGGAGATGATCATGTGCTCCATGGATTACAGGAGTTGGGAATTCT
. : . : . : . : . : . :
JMFS008D10+ CTAGTAGCAGGAGCAGCCACATAAGGATTATAATGATTGGAAGATGTAGCCATAGCTATG
JMSF032O13+ CTAGTAGCAGGAGCAGCCACATAAGGATTATAATGATTGGAAGATGTAGCCATAGCTATG
____________________________________________________________
consensus CTAGTAGCAGGAGCAGCCACATAAGGATTATAATGATTGGAAGATGTAGCCATAGCTATG
. : . : . : . : . : . :
JMFS008D10+ TCAAGGTTTGTTGCAGGACACTGATGAATAGTGCCATTATAATGTGTCATCCCATAAAAT
JMSF032O13+ TCAAGGTTTGTTGCAGGACACTGATGAATAGTGCCATTATAATGTGTCATCCCATAAAAT
JMSF006H02+ CAGGACACTGATGAATAGTGCCATTATAATGTGTCATCCCATAAAAT
____________________________________________________________
consensus TCAAGGTTTGTTGCAGGACACTGATGAATAGTGCCATTATAATGTGTCATCCCATAAAAT
. : . : . : . : . : . :
JMFS008D10+ AATGGATTTTCATGCTGTTCTGGCAGCGGATGCAGATAGGTATTACCAGCATTTCCTGAC
JMSF010K16+ AATGGATTTTCATGCTGTTCTGGCAGCGGATGCAGATAGGTATTACCAGCATTTCCTGAC
JMSF032O13+ AATGGATTTTCATGCTGTTCTGGCAGCGGATGCAGATAGGTATTACCAGCATTTCCTGAC
JMSF006H02+ AATGGATTTTCATGCTGTTCTGGCAGCGGATGCAGATAGGTATTACCAGCATTTCCTGAC
____________________________________________________________
consensus AATGGATTTTCATGCTGTTCTGGCAGCGGATGCAGATAGGTATTACCAGCATTTCCTGAC
. : . : . : . : . : . :
JMFS008D10+ ACTGGTACTACAGTATGAACATTAGGCTGCGGAAAAGTTGGTAAATTCCCATAAAAGACA
JMSF010K16+ ACTGGTACTACAGTATGAACATTAGGCTGCGGAAAAGTTGGTAAATTCCCATAAAAGACA
JMSF032O13+ ACTGGTACTACAGTATGAACATTAGGCTGCGGAAAAGTTGGTAAATTCCCATAAAAGACA
JMSF006H02+ ACTGGTACTACAGTATGAACATTAGGCTGCGGAAAAGTTGGTAAATTCCCATAAAAGACA
____________________________________________________________
consensus ACTGGTACTACAGTATGAACATTAGGCTGCGGAAAAGTTGGTAAATTCCCATAAAAGACA
. : . : . : . : . : . :
JMFS008D10+ CAAGGATCAGGGAGAATATGGTGTTGCCCTTGCTGGTCTGCTTCAAAATCAATCATATGA
JMSF010K16+ CAAGGATCAGGGAGAATATGGTGTTGCCCTTGCTGGTCTGCTTCAAAATCAATCATATGA
JMSF032O13+ CAAGGATCAGGGAGAATATGGTGTTGCCCTTGCTGGTCTGCTTCAAAATCAATCATATGA
JMSF006H02+ CAAGGATCAGGGAGAATATGGTGTTGCCCTTGCTGGTCTGCTTCAAAATCAATCATATGA
____________________________________________________________
consensus CAAGGATCAGGGAGAATATGGTGTTGCCCTTGCTGGTCTGCTTCAAAATCAATCATATGA
. : . : . : . : . : . :
JMFS008D10+ CTGTTGTGTGGGGTATTCCTTTGCCCCATGTTGACAAATAAAATTTATTGGAAGATGCCT
JMSF010K16+ CTGTTGTGTGGGGTATTCCTTTGCCCCATGTTGACAAATAAAATTTATTGGAAGATGCCT
JMSF032O13+ CTGTTGTGTGGGGTATTCCTTTGCCCCATGTTGACAAATAAAATTTATTGGAAGATGCCT
JMSF006H02+ CTGTTGTGTGGGGTATTCCTTTGCCCCATGTTGACAAATAAAATTTATTGGAAGATGCCT
____________________________________________________________
consensus CTGTTGTGTGGGGTATTCCTTTGCCCCATGTTGACAAATAAAATTTATTGGAAGATGCCT
. : . : . : . : . : . :
JMFS008D10+ TTTTACCATAAACAAACAGATTGGCTTCCCTAGTACCGCCTTAACTCCCCGTTCCAAAAC
JMSF010K16+ TTTTACCATAAACAAACAGATTGGCTTCCCTAGTACCGCCTTAACTCCCCGTTCCAAAAC
JMSF032O13+ TTTTACCATAAACAAACAGATTGGCTTCCCTAGTACCGCCTTAACTCCCCGTTCCAAAAC
JMSF006H02+ TTTTACCATAAACAAACAGATTGGCTTCCCTAGTACCGCCTTAACTCCCCGTTCCAAAAC
____________________________________________________________
consensus TTTTACCATAAACAAACAGATTGGCTTCCCTAGTACCGCCTTAACTCCCCGTTCCAAAAC
. : . : . : . : . : . :
JMFS008D10+ ACAGATAAATAATCTGTAA
JMSF010K16+ ACAGATAAATAATCTGTAATCAGTAATCCTGTT
JMSF032O13+ ACAGATAAATAATCTGTAATCAGTAATCCTGTT
JMSF006H02+ ACAGATAAATAATCTGTAATCAGTAATCCTGTTGCCCTGTTGGTGTTCTTGGAATGCCTC
____________________________________________________________
consensus ACAGATAAATAATCTGTAATCAGTAATCCTGTTGCCCTGTTGGTGTTCTTGGAATGCCTC