| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF005O21 | Sequence | 265 | 013230 (5) | ref|XP_009625354.1| | 1e-17 | PREDICTED: SUMO-activating enzyme subunit 1B-1-like [Nicotiana tomentosiformis] | 449 | 013644 (8) | ref|XP_007038022.1| | 3e-23 | DNA damage tolerance protein rad31, putative isoform 4 [Theobroma cacao] gb|EOY |
| JMSF006A09 | Sequence | 248 | 013230 (5) | ref|XP_009625354.1| | 3e-18 | PREDICTED: SUMO-activating enzyme subunit 1B-1-like [Nicotiana tomentosiformis] | 299 | 008433 (4) | |||
| JMSF006G02 | Sequence | 386 | 013230 (5) | ref|XP_009781346.1| | 3e-52 | PREDICTED: SUMO-activating enzyme subunit 1B-1-like [Nicotiana sylvestris] | |||||
| JMSF034G10 | Sequence | 653 | 013230 (5) | ref|XP_009781346.1| | 4e-17 | PREDICTED: SUMO-activating enzyme subunit 1B-1-like [Nicotiana sylvestris] | 752 | 013644 (8) | ref|XP_004234311.1| | 6e-88 | PREDICTED: SUMO-activating enzyme subunit 1B-1 [Solanum lycopersicum] ref|XP_010 |
| JMSF034H07 | Sequence | 708 | 013230 (5) | ref|XP_009781346.1| | 6e-17 | PREDICTED: SUMO-activating enzyme subunit 1B-1-like [Nicotiana sylvestris] | 747 | 013644 (8) | ref|XP_004234311.1| | 2e-87 | PREDICTED: SUMO-activating enzyme subunit 1B-1 [Solanum lycopersicum] ref|XP_010 |
This contig is upended
. : . : . : . : . : . :
JMSF034H07+ GGAAAACGGTCAATGTAACCACAATGTACTAGACTCAAGAGTATATCACCACAAAAT
____________________________________________________________
consensus GGAAAACGGTCAATGTAACCACAATGTACTAGACTCAAGAGTATATCACCACAAAAT
. : . : . : . : . : . :
JMSF034H07+ TATTAGCAAGTTTTTTGAAGTATGTTATGTGCTCCCGTCATGGGCAAGAAAACATAGGGA
____________________________________________________________
consensus TATTAGCAAGTTTTTTGAAGTATGTTATGTGCTCCCGTCATGGGCAAGAAAACATAGGGA
. : . : . : . : . : . :
JMSF034G10+ GAAGAGAAGAAGACACTGGGTTTGC
JMSF034H07+ AAAAGGAAGAAAGAATAATAGTTGGAAAAAGAAAAGAAGAGAAGAAGACACTGGGTTTGC
____________________________________________________________
consensus AAAAGGAAGAAAGAATAATAGTTGGAAAAAGAAAAGAAGAGAAGAAGACACTGGGTTTGC
. : . : . : . : . : . :
JMSF034G10+ TTGAGACCCAAAACTCCCTTAGACCCTTTTTGGGATTAAACTTTTGCTTGTTATTATTCT
JMSF034H07+ TTGAGACCCAAAACTCCCTTAGACCCTTTTTGGGATTAAACTTTTGCTTGTTATTATTCT
____________________________________________________________
consensus TTGAGACCCAAAACTCCCTTAGACCCTTTTTGGGATTAAACTTTTGCTTGTTATTATTCT
. : . : . : . : . : . :
JMSF034G10+ GAATAATACTCTCTTTTTATAGGGTAAAATACAACTCATAGAATGACTAAATAAGCTAAG
JMSF034H07+ GAATAATACTCTCTTTTTATAGGGTAAAATACAACTCATAGAATGACTAAATAAGCTAAG
____________________________________________________________
consensus GAATAATACTCTCTTTTTATAGGGTAAAATACAACTCATAGAATGACTAAATAAGCTAAG
. : . : . : . : . : . :
JMSF034G10+ TAATCTGTTGAAATCTTCTAAATAATTAAACTACCTAAATTAATTCGAAGACTAAGAATA
JMSF034H07+ TAATCTGTTGAAATCTTCTAAATAATT-AACTACCTAAATTAATTCGAAGACTAAGAATA
____________________________________________________________
consensus TAATCTGTTGAAATCTTCTAAATAATTAAACTACCTAAATTAATTCGAAGACTAAGAATA
. : . : . : . : . : . :
JMSF034G10+ ATAAGGTAACTATTTAGTAATTTCTAAATAACTATTTATTAGTTTCTAAATAACTATTTA
JMSF034H07+ ATAAGGTAACTATTTAGTAATTTCTAAATAACTATTTATTAGTTTCTAAATAACTATTTA
____________________________________________________________
consensus ATAAGGTAACTATTTAGTAATTTCTAAATAACTATTTATTAGTTTCTAAATAACTATTTA
. : . : . : . : . : . :
JMSF034G10+ GTAATTTATTAATATCTAAAATAAGACTTCCTCAGAGCATGTATCAAAGTACCTCTACAG
JMSF006G02+ CTCTACAG
JMSF005O21+ CTCTACAG
JMSF034H07+ GTAATTTATTAATATCTAAAATAAGACTTCCTCAGAGCATGTATCAAAGTACCTCTACAG
JMSF006A09+ CTCTACAG
____________________________________________________________
consensus GTAATTTATTAATATCTAAAATAAGACTTCCTCAGAGCATGTATCAAAGTACCTCTACAG
. : . : . : . : . : . :
JMSF034G10+ CAGTCCCTTTGAGTCCACTGACAAACACATGAGCTTTACTGAGGCGTCTTTGAGCATCAA
JMSF006G02+ CAGTCCCTTTGAGTCCACTGACAAACACATGAGCTTTACTGAGGCGTCTTTGAGCATCAA
JMSF005O21+ CAGTCCCTTTGAGTCCACTGACAAACACATGAGCTTTACTGAGGCGTCTTTGAGCATCAA
JMSF034H07+ CAGTCCCTTTGAGTCCACTGACAAACACATGAGCTTTACTGAGGCGTCTTTGAGCATCAA
JMSF006A09+ CAGTCCCTTTGAGTCCACTGACAAACACATGAGCTTTACTGAGGCGTCTTTGAGCATCAA
____________________________________________________________
consensus CAGTCCCTTTGAGTCCACTGACAAACACATGAGCTTTACTGAGGCGTCTTTGAGCATCAA
. : . : . : . : . : . :
JMSF034G10+ CGCCCCAGACCCTAATCTGACGATCGTAGATGGCAGTTTCCTGCTCTGTCAACTCCGCTC
JMSF006G02+ CGCCCCAGACCCTAATCTGACGATCGTAGATGGCAGTTTCCTGCTCTGTCAACTCCGCTC
JMSF005O21+ CGCCCCAGACCCTAATCTGACGATCGTAGATGGCAGTTTCCTGCTCTGTCAACTCCGCTC
JMSF034H07+ CGCCCCAGACCCTAATCTGACGATCGTAGATGGCAGTTTCCTGCTCTGTCAACTCCGCTC
JMSF006A09+ CGCCCCAGACCCTAATCTGACGATCGTAGATGGCAGTTTCCTGCTCTGTCAACTCCGCTC
____________________________________________________________
consensus CGCCCCAGACCCTAATCTGACGATCGTAGATGGCAGTTTCCTGCTCTGTCAACTCCGCTC
. : . : . : . : . : . :
JMSF034G10+ GCTCCATATTCCCGAACAAAACAGCTGTAAGAATCAAGAGTTGAGGGTAGTGCGAACCGT
JMSF006G02+ GCTCCATATTCCCGAACAAAACAGCTGTAAGAATCAAGAGTTGAGGGTAGTGCGAACCGT
JMSF005O21+ GCTCCATATTCCCGAACAAAACAGCTGTAAGAATCAAGAGTTGAGGGTAGTGCGAACCGT
JMSF034H07+ GCTCCATATTCCCGAACAAAACAGCTGTAAGAATCAAGAGTTGAGGGTAGTGCGAACCGT
JMSF006A09+ GCTCCATATTCCCGAACAAAACAGCTGTAAGAATCAAGAGTTGAGGGTAGTGCGAACCGT
____________________________________________________________
consensus GCTCCATATTCCCGAACAAAACAGCTGTAAGAATCAAGAGTTGAGGGTAGTGCGAACCGT
. : . : . : . : . : . :
JMSF034G10+ CTTCTTCCTTAGGCTCCTTGCTCGACAAGTCGACAGTTGCCCTCTATCCGT
JMSF006G02+ CTTCTTCCTTAGGCTCCTTGCTCGACAAGTCGACAGTTGCCCTCT
JMSF005O21+ CTTCTTCCTTAGGCTCCTTGCTCGACAAGTCGACAGTTGCCCTCT
JMSF034H07+ CTTCTTCCTTAGGCTCCTTGCTCGACAAGTCGACAGTTGCCCTCTATCCGT
JMSF006A09+ CTTCTTCCTTAGGCTCCTTGCTCGACAAGTCGACAGTTGCCCTCTATCCGTGATTTTCCC
____________________________________________________________
consensus CTTCTTCCTTAGGCTCCTTGCTCGACAAGTCGACAGTTGCCCTCTATCCGTGATTTTCCC