| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF033D07 | Sequence | 375 | 013229 (6) | ref|XP_007218801.1| | 3e-42 | hypothetical protein PRUPE_ppa009820mg [Prunus persica] gb|EMJ20000.1| hypotheti | 701 | 013229 (6) | gb|EYU19463.1| | 6e-95 | hypothetical protein MIMGU_mgv1a012444mg [Erythranthe guttata] |
| JMFF043F08 | Sequence | 592 | 013229 (6) | gb|EYU19463.1| | 4e-97 | hypothetical protein MIMGU_mgv1a012444mg [Erythranthe guttata] | 610 | 013229 (6) | ref|XP_006477111.1| | 3e-08 | PREDICTED: ras-related protein RABD2a-like [Citrus sinensis] gb|KDO57090.1| hypo |
| JMSF005K22 | Sequence | 316 | 013229 (6) | ref|XP_007218801.1| | 3e-28 | hypothetical protein PRUPE_ppa009820mg [Prunus persica] gb|EMJ20000.1| hypotheti | 496 | 013229 (6) | gb|EYU19463.1| | 6e-60 | hypothetical protein MIMGU_mgv1a012444mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
rJMFF043F08- GAGAGCAAGGTTCTTGTTATAAACGTA
____________________________________________________________
consensus GAGAGCAAGGTTCTTGTTATAAACGTA
. : . : . : . : . : . :
rJMFF043F08- TATGTGCAATAAGTAATTGGTCCATACATGTGAACATAAAAGTGCAGTTCAACTATCAAC
____________________________________________________________
consensus TATGTGCAATAAGTAATTGGTCCATACATGTGAACATAAAAGTGCAGTTCAACTATCAAC
. : . : . : . : . : . :
rJMFF043F08- TTAACTCGAAATCACTACCTAAAAGTGAGCTAAGAATTACAATGAGACTGGCTCAAATCA
____________________________________________________________
consensus TTAACTCGAAATCACTACCTAAAAGTGAGCTAAGAATTACAATGAGACTGGCTCAAATCA
. : . : . : . : . : . :
rJMFF043F08- GAAGATTAATAGACAGTTCTCAAATTTAAAATTGTGGTTACCAAGTAAACTGTCCGACCA
rJMFF033D07- AATTTAAAATTGTGGTTACCAAGTAAACTGTCCGACCA
____________________________________________________________
consensus GAAGATTAATAGACAGTTCTCAAATTTAAAATTGTGGTTACCAAGTAAACTGTCCGACCA
. : . : . : . : . : . :
rJMFF043F08- ACTCGAAAGAATGGGTGTGCTGTATACCAAAGTGCTGATATGAAAAAACAACATGAAAGC
rJMSF005K22- TGCTGATATGAAAAAACAACATGAAAGC
rJMFF033D07- ACTCGAAAGAATGGGTGTGCTGTATACCAAAGTGCTGATATGAAAAAACAACATGAAAGC
____________________________________________________________
consensus ACTCGAAAGAATGGGTGTGCTGTATACCAAAGTGCTGATATGAAAAAACAACATGAAAGC
. : . : . : . : . : . :
rJMFF043F08- AAATCATCATATATCAACTAAAAACTGTGCTTCACACCACAGCACAAAAAAATGATGGAA
rJMSF005K22- AAATCATCATATATCAACTAAAAACTGTGCTTCACACCACAGCAC-AAAAAATGATGGAA
rJMFF033D07- AAATCATCATATATCAACTAAAAACTATGCTTCACACCACAGCAC-AAAAAATGATGGAA
____________________________________________________________
consensus AAATCATCATATATCAACTAAAAACTGTGCTTCACACCACAGCAC-AAAAAATGATGGAA
. : . : . : . : . : . :
rJMFF043F08- AGGTTAATTTTACATCACACATGAACATCATCATCACCATCATATCACTTCACAAATGCA
rJMSF005K22- AGGTTAATTTTACATCACACATGAACATCATCATCACCATCATATCACTTCACAAATGCA
rJMFF033D07- AGGTTAATTTTACATCACACATGAACATCATCATCACCATCATATCACTTCACAAATGCA
____________________________________________________________
consensus AGGTTAATTTTACATCACACATGAACATCATCATCACCATCATATCACTTCACAAATGCA
. : . : . : . : . : . :
rJMFF043F08- CTTTCCCTCTTTCAATTCGAGCAGCAACCAGCCGACTTCTGCTTCACGGGTTGCCCTTTA
rJMSF005K22- CTTTCCCTCTTTCAATTCGAGCAGCAACCAGCCGACTTCTGCTTCACGGGTTGCCCTTTA
rJMFF033D07- CTTTCCCTCTTTCAATTCGAGCAGCAACCAGCCGACTTCTGCTTCACGGGTTGCCCTTTA
____________________________________________________________
consensus CTTTCCCTCTTTCAATTCGAGCAGCAACCAGCCGACTTCTGCTTCACGGGTTGCCCTTTA
. : . : . : . : . : . :
rJMFF043F08- ATCTGCACGGTTGGCGGCCTTGCATTGCCCGAGGCCGGTTGGCTCGCCATCC
rJMSF005K22- ATCTGCACGGTTGGCGGCCTTGCATTGCCCGAGGCCGGTTGGCTCGCCATCCGGCTCTTG
rJMFF033D07- ATCTGCACGGTTGGCGGCCTTGCATTGCCCGAGGCCGGTTGGCTCGCCATCCGGCTCTTG
____________________________________________________________
consensus ATCTGCACGGTTGGCGGCCTTGCATTGCCCGAGGCCGGTTGGCTCGCCATCCGGCTCTTG
. : . : . : . : . : . :
rJMSF005K22- ATTGTAGATGTCATTGCCATGAAAGCCTGCTCCACATTGGATGAATTCTTCGCGCTCGTC
rJMFF033D07- ATTGTAGATGTCATTGCCATGAAAGCCTGCTCCACATTGGATGAATTCTTCGCGCTCGTC
____________________________________________________________
consensus ATTGTAGATGTCATTGCCATGAAAGCCTGCTCCACATTGGATGAATTCTTCGCGCTCGTC
. : . : . : . : . : . :
rJMSF005K22- TCCATGAAAGGAATTCCAATTTCATCAGCAAAAGCCTGAGCTGTTTCCGTGGCCACAACC
rJMFF033D07- TCCATGAAAGGAATTCCAATTTCATCAGCAAAAGCCTGAGCTGTTTCCGTGGCCACAACC
JMFF043F08+ GGAATTCCAATTTCATCAGCAAAAGCCTGAGCTGTTTCCGTGGCCACAACC
____________________________________________________________
consensus TCCATGAAAGGAATTCCAATTTCATCAGCAAAAGCCTGAGCTGTTTCCGTGGCCACAACC
. : . : . : . : . : . :
rJMSF005K22- TTTTGCGATGTGAGGTCAGACTTGTTCCCGACAAGAAGCTTGTTTACACTCTCACTTGCG
rJMFF033D07- TTTTGCGATGTGAGGTCAGACTTGTTCCCGACAAGAAGCTTGTTTACACTCTCACTTGCG
JMFF043F08+ TTTTGCGATGTGAGGTCAGACTTGTTCCCGACAAGAAGCTTGTTTACACTCTCACTTGCG
____________________________________________________________
consensus TTTTGCGATGTGAGGTCAGACTTGTTCCCGACAAGAAGCTTGTTTACACTCTCACTTGCG
. : . : . : . : . : . :
rJMSF005K22- TATCGGTTAATTTCATTTAACCATTGCTTAACGTTGTTAAAACTCTCTT
rJMFF033D07- TATCGGTTAATTTCATTTAACCATTGCTTAACGTTGTTAAAACTCTCTTGGTCAGTCACG
JMFF043F08+ TATCGGTTAATTTCATTTAACCATTGCTTAACGTTGTTAAAACTCTCTTGGTCAGTCACG
____________________________________________________________
consensus TATCGGTTAATTTCATTTAACCATTGCTTAACGTTGTTAAAACTCTCTTGGTCAGTCACG
. : . : . : . : . : . :
rJMFF033D07- TCGTAAACCACAATTATGCCATGAGCCCCGCGATAGTAACTGCTCGTGATTGTCCTAAAA
JMFF043F08+ TCGTAAACCACAATTATGCCATGAGCCCCGCGATAGTAACTGCTCGTGATTGTCCTAAAA
JMFF033D07+ ATTGTCNTAAAA
____________________________________________________________
consensus TCGTAAACCACAATTATGCCATGAGCCCCGCGATAGTAACTGCTCGTGATTGTCCTAAAA
. : . : . : . : . : . :
rJMFF033D07- CGCTCTTGACCAGCAGTGTCCCAGATTTGGAGTTTAATGGTTTTTCCATCCTGTTCCA
JMFF043F08+ CGCTCTTGACCAGCAGTGTCCCAGATTTGGAGTTTAATGGTTTTTCCATCCTGTTCCACC
JMFF033D07+ CGCTCTTGACCAGCAGTGTCCCAGATTTGGAGTTTAATGGTTTTTCCATCCTGTTCCACC
JMSF005K22+ TCCTGTTCCACC
____________________________________________________________
consensus CGCTCTTGACCAGCAGTGTCCCAGATTTGGAGTTTAATGGTTTTTCCATCCTGTTCCACC
. : . : . : . : . : . :
JMFF043F08+ GTTCGGATTTTAAAGTCCACTCCGATGGTACTGATATAGCTTTCGAGATATGAATTGTCA
JMFF033D07+ GTTCGGATTTTAAAGTCCACTCCGATGGTACTGATATAGCTTTCGAGATATGAATTGTCA
JMSF005K22+ GTTCGGATTTTAAAGTCCACTCCGATGGTACTGATATAGCTTTCGAGATATGAATTGTCA
____________________________________________________________
consensus GTTCGGATTTTAAAGTCCACTCCGATGGTACTGATATAGCTTTCGAGATATGAATTGTCA
. : . : . : . : . : . :
JMFF043F08+ GCGAACCGCAGAAGAAGGCATGATTTCCCAACACCAGAATCTCCAATCAGCAAGAGCTTA
JMFF033D07+ GCGAACCGCAGAAGAAGGCATGATTTCCCAACACCAGAATCTCCAATCAGCAAGAGCTTA
JMSF005K22+ GCGAACCGCAGAAGAAGGCATGATTTCCCAACACCAGAATCTCCAATCAGCAAGAGCTTA
____________________________________________________________
consensus GCGAACCGCAGAAGAAGGCATGATTTCCCAACACCAGAATCTCCAATCAGCAAGAGCTTA
. : . : . : . : . : . :
JMFF043F08+ AAAAGGTAATCATATTCTTGATTCATAACTCCGGTATTGAGCTGGAGATCGGTGCTGCAA
JMFF033D07+ AAAAGGTAATCATATTCTTGATTCATAACTCCGGTATTGAGCTGGAGATCGGTGCTGCAA
JMSF005K22+ AAAAGGTAATCATATTCTTGATTCATAACTCCGGTATTGAGCTGGAGATCGGTGCTGCAA
____________________________________________________________
consensus AAAAGGTAATCATATTCTTGATTCATAACTCCGGTATTGAGCTGGAGATCGGTGCTGCAA
. : . : . : . : . : . :
JMFF043F08+ GATGTGGGGATGAACGGTGCCGGAGAATTCGAACGGAATTCGGGTGTTTTCCGGCGAGAA
JMFF033D07+ GATGTGGGGATGAACGGTGCCGGAGAATTCGAACGGAATTCGGGTGTTTTCCGGCGAGAA
JMSF005K22+ GATGTGGGGATGAACGGTGCCGGAGAATTCGAACGGAATTCGGGTGTTTTCCGGCGAGAA
____________________________________________________________
consensus GATGTGGGGATGAACGGTGCCGGAGAATTCGAACGGAATTCGGGTGTTTTCCGGCGAGAA
. : . : . : . : . : . :
JMFF043F08+ TTTACAGAAATTATGGAGATTCGTGGCAGGGTGGGCGGAGAGGAACAGTTTTTTT
JMFF033D07+ TTTACAGAAATTATGGAGATTCGTGGCAGGGTGGGCGGAGAGGAACAGTTTTTTT
JMSF005K22+ TTTACAGAAATTATGGAGATTCGTGGCAGGGTGGGCGGAGAGGAACAGTTTTTTTGGTTC
____________________________________________________________
consensus TTTACAGAAATTATGGAGATTCGTGGCAGGGTGGGCGGAGAGGAACAGTTTTTTTGGTTC