| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003A20 | Sequence | 320 | 013222 (4) | 737 | 007109 (3) | ref|XP_006341422.1| | 2e-99 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum tuberosum] | |||
| JMSF004I24 | Sequence | 304 | 013222 (4) | ||||||||
| JMSF022B20 | Sequence | 648 | 013222 (4) | ref|XP_009774796.1| | 5e-37 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Nicotiana sylvestris | 721 | 007109 (3) | ref|XP_006341422.1| | 6e-86 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum tuberosum] |
| JMSF039B11 | Sequence | 683 | 013222 (4) | ref|XP_009774796.1| | 4e-62 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Nicotiana sylvestris | 662 | 007109 (3) | ref|XP_006341422.1| | 2e-79 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF039B11+ CGTCGCAAACTGC
____________________________________________________________
consensus CGTCGCAAACTGC
. : . : . : . : . : . :
JMSF039B11+ AAAGACTGACAGGCCGAGGCATTGCACGGGACCGAGAGATAAGAAGGGGACATTGAGGGG
____________________________________________________________
consensus AAAGACTGACAGGCCGAGGCATTGCACGGGACCGAGAGATAAGAAGGGGACATTGAGGGG
. : . : . : . : . : . :
JMSF039B11+ TTAAAGAGAGGCTGTGGTTGACTATAACATGATCTGCAAGGCTGGCATTGGACCCATGTT
JMSF022B20+ CCATGTT
____________________________________________________________
consensus TTAAAGAGAGGCTGTGGTTGACTATAACATGATCTGCAAGGCTGGCATTGGACCCATGTT
. : . : . : . : . : . :
JMSF039B11+ AGGTCACTCCCTGTATCAACAATTACTGTCATGTTTCTCCTGCCTATGCTTATGGTCACA
JMSF022B20+ AGGTCACTCCCTGTATCAACAATTACTGTCATGTTTCTCCTGCCTATGCTTATGGTCACA
____________________________________________________________
consensus AGGTCACTCCCTGTATCAACAATTACTGTCATGTTTCTCCTGCCTATGCTTATGGTCACA
. : . : . : . : . : . :
JMSF039B11+ ATGTAGTTTAGAGTCTGTAGTTTGAAACCAGAAGTGATTGGTGTCTGGGCTTGTTCTGAA
JMSF022B20+ ATGTAGTTTAGAGTCTGTAGTTTGAAACCAGAAGTGATTGGTGTCTGGGCTTGTTCTGAA
____________________________________________________________
consensus ATGTAGTTTAGAGTCTGTAGTTTGAAACCAGAAGTGATTGGTGTCTGGGCTTGTTCTGAA
. : . : . : . : . : . :
JMSF039B11+ CCCTCAATTTTCTTTCTGGAAATAGCATTCTTGATGTGGGATTGTATCGATCGTACCCGA
JMSF022B20+ CCCTCAATTTTCTTTCTGGAAATAGCATTCTTGATGTGGGATTGTATCGATCGTACCCGA
____________________________________________________________
consensus CCCTCAATTTTCTTTCTGGAAATAGCATTCTTGATGTGGGATTGTATCGATCGTACCCGA
. : . : . : . : . : . :
JMSF039B11+ ATTTCATCATCTGCCAGGCTTTTCTTCTGCCATTCTTCCCAGTTCTTTACTGCCCCAGAA
JMSF022B20+ ATTTCATCATCTGCCAGGCTTTTCTTCTGCCATTCTTCCCAGTTCTTTACTGCCCCAGAA
____________________________________________________________
consensus ATTTCATCATCTGCCAGGCTTTTCTTCTGCCATTCTTCCCAGTTCTTTACTGCCCCAGAA
. : . : . : . : . : . :
JMSF039B11+ CACAAGCCCTTGTGCTTCATCTCCAAAATGGTTGCCCCATTTTCTTTCCTTGATTTCTGG
JMSF003A20+ TCTGG
JMSF022B20+ CACAAGCCCTTGTGCTTCATCTCCAAAATGGTTGCCCCATTTTCTTTCCTTGATTTCTGG
____________________________________________________________
consensus CACAAGCCCTTGTGCTTCATCTCCAAAATGGTTGCCCCATTTTCTTTCCTTGATTTCTGG
. : . : . : . : . : . :
JMSF039B11+ GATGAACAACTTGGGTTAAGGTTGTACCCTTTCCTCCATGTTCTGGGTTGGAGTTTTTTC
JMSF003A20+ GATGAACAACTTGGGTTAAGGTTGTACCCTTTCCTCCATGTTCTGGGTTGGAGTTTTTTC
JMSF022B20+ GATGAACAACTTGGGTTAAGGTTGTACCCTTTCCTCCATGTTCTGGGTTGGAGTTTTTTC
____________________________________________________________
consensus GATGAACAACTTGGGTTAAGGTTGTACCCTTTCCTCCATGTTCTGGGTTGGAGTTTTTTC
. : . : . : . : . : . :
JMSF039B11+ AACGGAAAAACTACCTGTTTCTCTCCATAACTGTCAACAGAATCACCAGAAGTAGTAAGC
JMSF003A20+ AACGGAAAAACTACCTGTTTCTCTCCATAACTGTCAACAGAATCACCAGAAGTAGTAAGC
JMSF022B20+ AACGGAAAAACTACCTGTTTCTCTCCATAACTGTCAACAGAATCACCAGAAGTAGTAAGC
JMSF004I24+ GGAAAAACTACCTGTTTCTCTCCATAACTGTCAACAGAATCACCAGAAGTAGTAAGC
____________________________________________________________
consensus AACGGAAAAACTACCTGTTTCTCTCCATAACTGTCAACAGAATCACCAGAAGTAGTAAGC
. : . : . : . : . : . :
JMSF039B11+ ACAAGCAGCAGAAGGAGAAAACCAAGAAATGATGACCACAATGACATTTTCAACAGAGCT
JMSF003A20+ ACAAGCAGCAGAAGGAGAAAACCAAGAAATGATGACCACAATGACATTTTCAACAGAGCT
JMSF022B20+ ACAAGCAGCAGAAGGAGAAAACCAAGAAATGATGACCACAATGACATTTTCAACAGAGCT
JMSF004I24+ ACAAGCAGCAGAAGGAGAAAACCAAGAAATGATGACCACAATGACATTTTCAACAGAGCT
____________________________________________________________
consensus ACAAGCAGCAGAAGGAGAAAACCAAGAAATGATGACCACAATGACATTTTCAACAGAGCT
. : . : . : . : . : . :
JMSF039B11+ TAGCAAGCTTGTAGTGCATATACTTATTATGCAAAACTATTGAGAGAAAGATGGTAATAT
JMSF003A20+ TAGCAAGCTTGTAGTGCATATACTTATTATGCAAAACTATTGAGAGAAAGATGGTAATAT
JMSF022B20+ TAGCAAGCTTGTAGTGCATATACTTATTATGCAAAACTATTGAGAGAAAGATGGTAATAT
JMSF004I24+ TAGCAAGCTTGTAGTGCATATACTTATTATGCAAAACTATTGAGAGAAAGATGGTAATAT
____________________________________________________________
consensus TAGCAAGCTTGTAGTGCATATACTTATTATGCAAAACTATTGAGAGAAAGATGGTAATAT
. : . : . : . : . : . :
JMSF039B11+ TAATAACTC
JMSF003A20+ TAATAACTCAAAGAATAATGTGTTTTGGGGGACTATTAATCTTGAAAATAATGAAGAGAG
JMSF022B20+ TAATAACTCAAAGAATAATGTGTTTTGGGGGACTATTAATCTTGAAAATAATGAAGAGAG
JMSF004I24+ TAATAACTCAAAGAATAATGTGTTTTGGGGGACTATTAATCTTGAAAATAATGAAGAGAG
____________________________________________________________
consensus TAATAACTCAAAGAATAATGTGTTTTGGGGGACTATTAATCTTGAAAATAATGAAGAGAG
. : . : . : . : . : . :
JMSF003A20+ AAAAGAGGATGAAT
JMSF022B20+ AAAAGAGGATGAATAAGGAGAAGGGAGAGGAGAGATTCTT
JMSF004I24+ AAAAGAGGATGAATAAGGAGAAGGGAGAGGAGAGATTCTTGGGAGTTGGAAGTAGGCATC
____________________________________________________________
consensus AAAAGAGGATGAATAAGGAGAAGGGAGAGGAGAGATTCTTGGGAGTTGGAAGTAGGCATC