Contig 013219:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS135H07Sequence583013219 (3)ref|XP_009615667.1|3e-51PREDICTED: dual specificity protein phosphatase PHS1 isoform X3 [Nicotiana tome
JMFS166E05Sequence436013219 (3)emb|CDO98311.1|9e-32unnamed protein product [Coffea canephora]
JMSF003P21Sequence121013219 (3)758024455ref|XP_004171913.1|2e-39PREDICTED: dual specificity protein phosphatase PHS1-like, partial [Cucumis sat

Alignment

This contig is upended


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JMFS135H07+                     CTGTATGATGAAGAGAAGAGAGCATGCTCCAGGAAAAGGGGTTCGACTCA
                      ____________________________________________________________
consensus                       CTGTATGATGAAGAGAAGAGAGCATGCTCCAGGAAAAGGGGTTCGACTCA
 
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JMFS135H07+           ATGTCCATCATGGCAGCACTACCAAGTCTACCCCACAAACTCACTTCTGCTGCTTGTTCA
                      ____________________________________________________________
consensus             ATGTCCATCATGGCAGCACTACCAAGTCTACCCCACAAACTCACTTCTGCTGCTTGTTCA
 
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JMFS166E05+                                                     CTTGAGAGCATAGTATCA
JMFS135H07+           GAGGGCGGAGGGTCTTTCAGATCTGCACTTGACTCTTCTGGACTTGAGAGCATAGTATCA
                      ____________________________________________________________
consensus             GAGGGCGGAGGGTCTTTCAGATCTGCACTTGACTCTTCTGGACTTGAGAGCATAGTATCA
 
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JMFS166E05+           GCTCTGTGAGGACGACGAGGGAACCCTGATGAGCGGTTCTTGCCACTGCGTTTACGGACA
JMFS135H07+           GCTCTGTGAGGACGACGAGGGAACCCTGATGAGCGGTTCTTGCCACTGCGTTTACGGACA
                      ____________________________________________________________
consensus             GCTCTGTGAGGACGACGAGGGAACCCTGATGAGCGGTTCTTGCCACTGCGTTTACGGACA
 
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JMFS166E05+           AGCTCCAGCCATTCTGTGAACCGATATGCCGGCCCCACAGTAATATCCCCCAACATATAA
JMFS135H07+           AGCTCCAGCCATTCTGTGAACCGATATGCCGGCCCCACAGTAATATCCCCCAACATATAA
                      ____________________________________________________________
consensus             AGCTCCAGCCATTCTGTGAACCGATATGCCGGCCCCACAGTAATATCCCCCAACATATAA
 
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JMFS166E05+           AGCACCCGAGAAGTGATGTTAAAGGGAAATGGGGTCTCAGGCTCTTCGGATCCCAGATCA
JMFS135H07+           AGCACCCGAGAAGTGATGTTAAAGGGAAATGGGGTCTCAGGCTCTTCGGATCCCAGATCA
                      ____________________________________________________________
consensus             AGCACCCGAGAAGTGATGTTAAAGGGAAATGGGGTCTCAGGCTCTTCGGATCCCAGATCA
 
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JMFS166E05+           AAATCCTTCTCTTCCTCTTCTTTCTGAAGGGAGAAAAGGGCTTGATTCTCTTTACATTGA
JMFS135H07+           AAATCCTTCTCTTCCTCTTCTTTCTGAAGGGAGAAAAGGGCTTGATTCTCTTTACATTGA
                      ____________________________________________________________
consensus             AAATCCTTCTCTTCCTCTTCTTTCTGAAGGGAGAAAAGGGCTTGATTCTCTTTACATTGA
 
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JMFS166E05+           TTGGCCATATTCCCTTTTTTTTTTTTTTTAATAATTACTTTTCTTTGAAAATATTATGTT
JMFS135H07+           TTGGCCATATTCCCTTTTTTTTTTTTTTTAATAATTACTTTTCTTTGAAAATATTATGTT
                      ____________________________________________________________
consensus             TTGGCCATATTCCCTTTTTTTTTTTTTTTAATAATTACTTTTCTTTGAAAATATTATGTT
 
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JMFS166E05+           T--AAAAAAAAAAAAACGGATTTTCCCGCTTTTCTGGGCGGTCGAGAGTGTCAGTGAAA 
JMFS135H07+           TAAAAAAAAAAAAAAACGGATTTTCCCGCTTTTCTGGGCGGTCGAGAGTGTCAGTGAAAG
JMSF003P21+              AAAAAAAAAAAAACGGATTTTCCCGCTTTTCTGGGCGGTCGAGAGTGTCAGTGAAAG
                      ____________________________________________________________
consensus             TAAAAAAAAAAAAAAACGGATTTTCCCGCTTTTCTGGGCGGTCGAGAGTGTCAGTGAAAG
 
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JMFS135H07+           TGGGCTTCACGATCAAGAAGAGAAGTTT-AGCAGAGAGCGGTTTCATGGAGGTT      
JMSF003P21+           TGGGCTTCACGATCAAGAAGAGAAGTTTGAGCAGAGAGCGGTTTCATGGAGGTTTAACTC
                      ____________________________________________________________
consensus             TGGGCTTCACGATCAAGAAGAGAAGTTTGAGCAGAGAGCGGTTTCATGGAGGTTTAACTC