| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014A19 | Sequence | 484 | 013214 (6) | ref|XP_009790033.1| | 3e-40 | PREDICTED: glutelin type-B 2-like [Nicotiana sylvestris] | 584 | 011202 (4) | gb|EYU18928.1| | 1e-81 | hypothetical protein MIMGU_mgv1a008981mg [Erythranthe guttata] |
| JMFF022N03 | Sequence | 524 | 013214 (6) | ref|XP_004251313.1| | 1e-87 | PREDICTED: glutelin type-A 3-like [Solanum lycopersicum] | 652 | 011202 (4) | gb|EYU18928.1| | 3e-67 | hypothetical protein MIMGU_mgv1a008981mg [Erythranthe guttata] |
| JMFF023O09 | Sequence | 545 | 013214 (6) | ref|XP_009790033.1| | 1e-78 | PREDICTED: glutelin type-B 2-like [Nicotiana sylvestris] | |||||
| JMFF031M09 | Sequence | 545 | 013214 (6) | ref|XP_004251313.1| | 2e-90 | PREDICTED: glutelin type-A 3-like [Solanum lycopersicum] | 110 | 021287 | |||
| JMFF047M23 | Sequence | 510 | 013214 (6) | emb|CDP08990.1| | 5e-80 | unnamed protein product [Coffea canephora] | 459 | 011202 (4) | gb|EYU24103.1| | 3e-37 | hypothetical protein MIMGU_mgv1a022874mg [Erythranthe guttata] |
| JMSF003J01 | Sequence | 345 | 013214 (6) | ref|XP_009790033.1| | 3e-12 | PREDICTED: glutelin type-B 2-like [Nicotiana sylvestris] | 764 | 011202 (4) | ref|XP_011089417.1| | 9e-81 | PREDICTED: glutelin type-B 5 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFF023O09+ TCC
JMFF031M09+ ATCC
____________________________________________________________
consensus ATCC
. : . : . : . : . : . :
JMFF047M23+ CCG
JMFF022N03+ ACAAACTCAGTCGAAAAGCCAGTAAAGATACCGTTAGAGCCG
JMFF023O09+ ACATTCCACGCTNTACCTACAAACTCAGTCGAAAAGCCAGTAAAGATACCGTTTGAGCCG
JMFF031M09+ ACATTCCACGCTCTACTCACAAACTCAGTCGAAAAGCCAGTAAAAATACCGTTAGAGCCG
____________________________________________________________
consensus ACATTCCACGCTCTACTTACAAACTCAGTCGAAAAGCCAGTAAAGATACCGTTAGAGCCG
. : . : . : . : . : . :
JMFF047M23+ GTCAAGAAGAAGTCAGTGAATGAACCAGGTTTGTGAGGTGTTTGTGTATCACCGAGGAAG
JMFF022N03+ GTCAAAAAGAAGTCGGTGAATGAACCGGATTTGTGAGCTGTTTTTGTATCACCAAGGAAG
JMFF023O09+ GTCAAATAGAAGTCGGTGAATGAACCAGGTTTGTGAGCTGTTTTTGTATCACCGAGGAAG
JMFF031M09+ GTCAAGAAGAAGTCAGTGAATGAACCAGGTTTGTGAGCTGTTTGTGTATCACCGAGGAAG
____________________________________________________________
consensus GTCAAGAAGAAGTCGGTGAATGAACCAGGTTTGTGAGCTGTTTTTGTATCACCGAGGAAG
. : . : . : . : . : . :
JMFF047M23+ AGAACTACAAGCTCGGTGTCCATTTTATTGTACCACCACGTAACAACGCCAAAAGGAAGA
JMFF022N03+ AGAACTACGAGCTCGGTGTCCATTTTATTGTACCACCACGTAACAACGCCAAAAGGAAGA
JMFF023O09+ AGAACTACAAGCTCGGTATCCATTTTGTTGTACCACCACGTAACAACGCCAAAAGGAAGA
JMFF031M09+ AGAACTACAAGCTCGGTGTCCATTTTATTGTACCACCACGTAACAACGCCAAAAGGAAGA
____________________________________________________________
consensus AGAACTACAAGCTCGGTGTCCATTTTATTGTACCACCACGTAACAACGCCAAAAGGAAGA
. : . : . : . : . : . :
JMFF047M23+ GCAATTGCATCGCCCTTCTTGATGGCAATAACCTTCTCTTCTTTCTCAGGAAGGACAATT
JMFF022N03+ GCAATCGCATCGCCCTTCTTAATGGCGATAACCTTCTCTTCTTTCTCAGGAAGGACAATT
JMFF023O09+ GCAATCGCATCGCCCTTCTTAATGGGGATAACCTTCTCTTCTTTCTCAGGAAGGACAATT
JMFF031M09+ GCAATTGCATCGCCCTTCTTGATGGCAATAACCTTCTCTTCTTTCTCAGGAAGGACAATT
JMFF014A19+ TTCTTTCTCAGGAAGGACAATT
____________________________________________________________
consensus GCAATTGCATCGCCCTTCTTGATGGCGATAACCTTCTCTTCTTTCTCAGGAAGGACAATT
. : . : . : . : . : . :
JMFF047M23+ CCAGCAACTCCACTGCCTTGAAGAACATAGGCAACCCTGGCGGAATCAGAGTAAGAAGGA
JMFF022N03+ CCAGCAACTCCACTGCCTTGAAGAACATAGGCAACCCTGGCGGAATCAGAGTAAGAAGGA
JMFF023O09+ CCAGCAACTCCACTGCCTTGAAGAACATAGGCAACCCTGGCGGAATCACAGTAAGAAGGA
JMFF031M09+ CCAGCAACTCCACTGCCTTGAAGAACATAGGCAACCCTGGCGGAATCAGAGTAAGAAGGA
JMFF014A19+ CCAGCAACTCCACTGCCTTGAAGAACATAGGCAACCCTGGCGGAATCAGAGTAAGAAGGA
____________________________________________________________
consensus CCAGCAACTCCACTGCCTTGAAGAACATAGGCAACCCTGGCGGAATCAGAGTAAGAAGGA
. : . : . : . : . : . :
JMFF047M23+ AGAGCAAAGCCATACTGCTCGAGAGCAAGCTTGGCAGCGCCTATGTTCCCTTGGCGGAGC
JMFF022N03+ AGAGCAAAGCCATACTGCTCCAGAGCAAGCTTGGCAGCGCCTATGTTCCCTTGGCGGAGC
JMFF023O09+ AGAGCAAAGCCATACTGCTCAAGAGCAAGCTTGGCGGCGCCTATGTTCCCTTGGCAGAGC
JMFF031M09+ AGAGCAAAGCCATACTGCTCGAGAGCAAGCTTGGCAGCGCCTATGTTCCCTTGGCGGAGC
JMFF014A19+ AGAGCAAAGCCATACTGCTCGAGAGCAAGCTTGGCAGCGCCTATGTTCCCTTGGCGGAGC
____________________________________________________________
consensus AGAGCAAAGCCATACTGCTCGAGAGCAAGCTTGGCAGCGCCTATGTTCCCTTGGCGGAGC
. : . : . : . : . : . :
JMFF047M23+ ATGGGGAGCTCCTCCGGGCACCAGGCGTGATAAGAACCGCCATCTCCACCGTACACCTTC
JMFF022N03+ ATGGGGAGCTCCTCCGGGCACCAGGCGTGATAAGAACCGCCATCTCCGCCGTACACCTTC
JMFF023O09+ ATGGGGAGCTCCTCCGGGCACCAGGCGTGATAAGAACCGCCATCTCCACCGTATACCTTC
JMFF031M09+ ATGGGGAGCTCCTCCGGGCACCAGGCGTGATAAGAACCGCCATCTCCACCGTACACCTTC
JMFF014A19+ ATGGGGAGCTCCTCCGGGCACCAGGCGTGATAAGAACCGCCATCTCCACCGTACACCTTC
JMSF003J01+ CCGGGCACCAGGCGTGATAAGAACCGCCATCTCCGCCGTACACCTTC
____________________________________________________________
consensus ATGGGGAGCTCCTCCGGGCACCAGGCGTGATAAGAACCGCCATCTCCACCGTACACCTTC
. : . : . : . : . : . :
JMFF047M23+ TTGGCCAACTTTGGGGAAAGATCAAGATCCATTTTTCTCTT-AAAAGTTAAAAATTCCTA
JMFF022N03+ TTGGCCAACTTTGGGGAAAGATCAAGATCCATGTTTCTCTC-AAAAGTTAAAAATTCCTA
JMFF023O09+ TTGGCCAACTTTGGGGAAAGATCAAGATCCATTTTTCTCTCAAAAAGTGAAAAATTCCTA
JMFF031M09+ TTGGCCAACTTTGGGGAAAGATCAAGATCCATTTTTCTCTT-AAAAGTTAAAAATTCCTA
JMFF014A19+ TTGGCCAACTTTGGGGAAAGATCAAGATCCATTTTTCTCTT-AAAAGTTAAAAATTCCTA
JMSF003J01+ TTGGCCAACTTTGGGGAAAGATCAAGATCCATGTTTCTCTC-AAAAGTTAAAAATTCCTA
____________________________________________________________
consensus TTGGCCAACTTTGGGGAAAGATCAAGATCCATTTTTCTCTT-AAAAGTTAAAAATTCCTA
. : . : . : . : . : . :
JMFF047M23+ GCAAAAATAATTCAAGAAAAGCCTATCCCACTACTCTTCCAACCCAAAGATGAAGCTATG
JMFF022N03+ GCAAAAATAATTCAAGAAAAGCCTATCCCACTACTCTTCCAACCCAAAGATGAAGCTAT
JMFF023O09+ GCAAAAATAATTCAAGAAAAGCCTATCCCACTACTCTTCCAACCCAAAGATGAAACTATG
JMFF031M09+ GCAAAAATAATTCAAGAAAAGCCTATCCCACTACTCTTCCAACCCAAAGATGAAGCTATG
JMFF014A19+ GCAAAAATAATTCAAGAAAAGCCTATCCCACTACTCTTCCAACCCAAAGATGAAGCTATG
JMSF003J01+ GCAAAAATAATTCAAGAAAAGCCTATCCCGCTACTCTTCCAACCCAAAGATGAAGCTATG
____________________________________________________________
consensus GCAAAAATAATTCAAGAAAAGCCTATCCCACTACTCTTCCAACCCAAAGATGAAGCTATG
. : . : . : . : . : . :
JMFF047M23+ AT
JMFF023O09+ AT
JMFF031M09+ AT
JMFF014A19+ ATATTTGGAAGAAGAAGAAGCTTTGGTATTTATAGATGGATTAGAGTAGAGAAAAAAGGG
JMSF003J01+ ATATTTGGAAGAAGAAGAAGCTTGGGTATTTATAGATGGATTAGAGTTGAGAAAAAA-GG
____________________________________________________________
consensus ATATTTGGAAGAAGAAGAAGCTTTGGTATTTATAGATGGATTAGAGTTGAGAAAAAAGGG
. : . : . : . : . : . :
JMFF014A19+ CTGGGGATTGGGTTTGTTAGCGATTTCTCTGCTGTTTATTAGGAGTCAGGTGGTATTCAT
JMSF003J01+ CTGGGGATTGGATTTGTTAGCGATTTCTCTGCTGTTTATTAGGAGTCAGGTGGCATTCAT
____________________________________________________________
consensus CTGGGGATTGGGTTTGTTAGCGATTTCTCTGCTGTTTATTAGGAGTCAGGTGGTATTCAT
. : . : . : . : . : . :
JMFF014A19+ -GAATCATGGATCAGATAGAAGACTGAAGAGTCCAAATTA
JMSF003J01+ GGAATCATGGATCAGATAGAAGACTGAAGAGTCCAAATTACAGTGATCCGCTGATCCTTC
____________________________________________________________
consensus GGAATCATGGATCAGATAGAAGACTGAAGAGTCCAAATTACAGTGATCCGCTGATCCTTC