Contig 013212:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035G21Sequence584013212 (3)ref|XP_004235014.1|1e-13PREDICTED: polyadenylate-binding protein-interacting protein 11 [Solanum lycope650000361 (5)gb|KJB39555.1|5e-50hypothetical protein B456_007G019000 [Gossypium raimondii]
JMFF039I12Sequence583013212 (3)ref|XP_004235014.1|5e-19PREDICTED: polyadenylate-binding protein-interacting protein 11 [Solanum lycope671000361 (5)gb|KJB39555.1|1e-57hypothetical protein B456_007G019000 [Gossypium raimondii]
JMSF003I02Sequence346013212 (3)763000361 (5)ref|XP_011075899.1|1e-110PREDICTED: polyadenylate-binding protein-interacting protein 12 [Sesamum indicu

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF039I12+ GGAGTTCCCATTACGAAGG
                      ____________________________________________________________
consensus GGAGTTCCCATTACGAAGG
 
. : . : . : . : . : . :
JMFF039I12+ CCGGAATTAGCCTGCTGCAATACAAAATTGTTAGCAAAGTGCCCTCCACCAGGCGGCAGC
                      ____________________________________________________________
consensus CCGGAATTAGCCTGCTGCAATACAAAATTGTTAGCAAAGTGCCCTCCACCAGGCGGCAGC
 
. : . : . : . : . : . :
JMFF039I12+ GCCACCACTCTAAGGCTGCCGCCGATGCTGAGAGACGGCGGCACAAACTCCTCCGCCATG
JMFF035G21+ GAGAGACGGCGGCACAAACTCCTCCGCCATG
                      ____________________________________________________________
consensus GCCACCACTCTAAGGCTGCCGCCGATGCTGAGAGACGGCGGCACAAACTCCTCCGCCATG
 
. : . : . : . : . : . :
JMFF039I12+ GGATTCAATTTCGAGAGCATTTCTTCCAAATCCCTCATCTCTTTCTCGCTCTTAAACCCT
JMFF035G21+ GGATTCAATTTCGAGAGCATTTCTTCCAAATCCCTCATCTCTTTCTCGCTCTTAAACCCT
                      ____________________________________________________________
consensus GGATTCAATTTCGAGAGCATTTCTTCCAAATCCCTCATCTCTTTCTCGCTCTTAAACCCT
 
. : . : . : . : . : . :
JMFF039I12+ CTCCGACCATCGCCATCCTCCTCGTCAATCTGTACATCTCTCCTCGCATCCAAACCGTTC
JMFF035G21+ CTCCGACCATCGCCATCCTCCTCGTCAATCTGTACATCTCTCCTCGCATCCAAACCGTTC
                      ____________________________________________________________
consensus CTCCGACCATCGCCATCCTCCTCGTCAATCTGTACATCTCTCCTCGCATCCAAACCGTTC
 
. : . : . : . : . : . :
JMFF039I12+ ACTTTTGACCGCTGATCGCCCAGCACTCCATTGCCATTCTGCACCGTCTGGGAACTCTGA
JMFF035G21+ ACTTTTGACCGCTGATCGCCCAGCACTCCATTGCCATTCTGCACCGTCTGGGAACTCTGA
                      ____________________________________________________________
consensus ACTTTTGACCGCTGATCGCCCAGCACTCCATTGCCATTCTGCACCGTCTGGGAACTCTGA
 
. : . : . : . : . : . :
JMFF039I12+ TCACTCTGCGCACTGCTCTTTGTTGACTGGTCACGATCGGCTGCAACGACGTCGTTCTGC
JMFF035G21+ TCACTCTGCGCACTGCTCTTTGTTGACTGGTCACGATCGGCTGCAACGACGTCGTTCTGC
                      ____________________________________________________________
consensus TCACTCTGCGCACTGCTCTTTGTTGACTGGTCACGATCGGCTGCAACGACGTCGTTCTGC
 
. : . : . : . : . : . :
JMFF039I12+ ACATTACCGTCGTTCCCATTCTCAACCACCGCCATGATTCTTCAAGAACCTATACGTAGC
JMFF035G21+ ACATTACCGTCGTTCCCATTCTCAACCACCGCCATGATTCTTCAAGAACCTATACGTAGC
JMSF003I02+ CCCATTCTCAACCACCGCCATGATTCTTCAAGAACCTATACGTAGC
                      ____________________________________________________________
consensus ACATTACCGTCGTTCCCATTCTCAACCACCGCCATGATTCTTCAAGAACCTATACGTAGC
 
. : . : . : . : . : . :
JMFF039I12+ CGGACCAAAGATTTTTCCTTTCTACTAGTATGTTCCTTTGATCCTCCTTCCCCGATATGG
JMFF035G21+ CGGACCAAAGATTTTTCCTTTCTACTAGTATGTTCCTTTGATCCTCCTTCCCCGATATGG
JMSF003I02+ CGGACCAAAGATTTTTCCTTTCTACTAGTATGTTCCTTTGATCCTCCTTCCCCGATATGG
                      ____________________________________________________________
consensus CGGACCAAAGATTTTTCCTTTCTACTAGTATGTTCCTTTGATCCTCCTTCCCCGATATGG
 
. : . : . : . : . : . :
JMFF039I12+ GTTCTGCCAAAAACTGATAGAATTTAAATGTTGTCCATTGATGAGTGATTAGAGCTGCTG
JMFF035G21+ GTTCTGCCAAAAACTGATAGAATTTAAATGTTGTCCATTGATGAGTGATTAGAGCTGCTG
JMSF003I02+ GTTCTGCCAAAAACTGATAGAATTTAAATGTTGTCCATTGATGAGTGATTAGAGCTGCTG
                      ____________________________________________________________
consensus GTTCTGCCAAAAACTGATAGAATTTAAATGTTGTCCATTGATGAGTGATTAGAGCTGCTG
 
. : . : . : . : . : . :
JMFF039I12+ AAACTCAAAGAAAGATGTGAGCTT
JMFF035G21+ AAACTCAAAGAAAGATGTGAGCTT
JMSF003I02+ AAACTCAAAGAAAGATGTGAGCTTAGGAATCAAAAGAAAATCAAATACCCAATTTCTGAT
                      ____________________________________________________________
consensus AAACTCAAAGAAAGATGTGAGCTTAGGAATCAAAAGAAAATCAAATACCCAATTTCTGAT
 
. : . : . : . : . : . :
JMSF003I02+ TTTAAAGAGTTTTGGTAGTACTATGATTTTTACTGAGTCTGCAGAGAGAAGAGATGAGTA
                      ____________________________________________________________
consensus TTTAAAGAGTTTTGGTAGTACTATGATTTTTACTGAGTCTGCAGAGAGAAGAGATGAGTA
 
. : . : . : . : . : . :
JMSF003I02+ GTTGAAGGAGAGAGAGAAAAAGGGTGGGGGTTCTTCGGATCGTCCGTTTAGGCCACTATC
                      ____________________________________________________________
consensus GTTGAAGGAGAGAGAGAAAAAGGGTGGGGGTTCTTCGGATCGTCCGTTTAGGCCACTATC