Contig 013211:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS143F09Sequence612013211 (2)ref|XP_009777401.1|4e-44PREDICTED: cysteine-rich receptor-like protein kinase 25 isoform X1 [Nicotiana
JMSF003H05Sequence420013211 (2)ref|XP_009598808.1|4e-25PREDICTED: cysteine-rich receptor-like protein kinase 25 isoform X2 [Nicotiana 748017060ref|XP_007025947.1|7e-66Cysteine-rich protein, putative isoform 1 [Theobroma cacao] gb|EOY28569.1| Cyste

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS143F09+ TAAACGCAGTGAA
                      ____________________________________________________________
consensus TAAACGCAGTGAA
 
. : . : . : . : . : . :
JMFS143F09+ GTTAGCTTCTAGAGTCGCAAATTTCTTGCCGGATCCACCGCCGGCGGCTCGAGTGGCCAT
                      ____________________________________________________________
consensus GTTAGCTTCTAGAGTCGCAAATTTCTTGCCGGATCCACCGCCGGCGGCTCGAGTGGCCAT
 
. : . : . : . : . : . :
JMFS143F09+ CTGATTCAACGTGTTTCCGACAGCATCCATGAACCTAGCCGGCTGAGAATCGTTCTGTGT
                      ____________________________________________________________
consensus CTGATTCAACGTGTTTCCGACAGCATCCATGAACCTAGCCGGCTGAGAATCGTTCTGTGT
 
. : . : . : . : . : . :
JMFS143F09+ ATTATACAGATATATCCCGGGCGACTGGTCGGCTCTCCCGAACATAGAACTGTTGGAGTA
                      ____________________________________________________________
consensus ATTATACAGATATATCCCGGGCGACTGGTCGGCTCTCCCGAACATAGAACTGTTGGAGTA
 
. : . : . : . : . : . :
JMFS143F09+ ACGCAACATACAGAAATCGTACCAGACAACAACAGCCCTTTCGTTGGGGCATAGCTGCAG
                      ____________________________________________________________
consensus ACGCAACATACAGAAATCGTACCAGACAACAACAGCCCTTTCGTTGGGGCATAGCTGCAG
 
. : . : . : . : . : . :
JMFS143F09+ TATCTCTCTGATAGCATTTCTTACACAGGCCCCACAGTCGGAGGTGGAGACATCACCCCG
                      ____________________________________________________________
consensus TATCTCTCTGATAGCATTTCTTACACAGGCCCCACAGTCGGAGGTGGAGACATCACCCCG
 
. : . : . : . : . : . :
JMFS143F09+ GCACATGAACAGGCCGTACGCGGTGTCCCGGGAGTTGTCGCGTCCACCGCCGGCGGTGAA
                      ____________________________________________________________
consensus GCACATGAACAGGCCGTACGCGGTGTCCCGGGAGTTGTCGCGTCCACCGCCGGCGGTGAA
 
. : . : . : . : . : . :
JMFS143F09+ GCTGTAGAAACCATCTTCGCGGGTGGCATTGGAAGAAAGGGTGGAGAGGAGAACATTGAG
JMSF003H05+ TTGGAAGAAAGGGTGGAGAGGAGAACATTGAG
                      ____________________________________________________________
consensus GCTGTAGAAACCATCTTCGCGGGTGGCATTGGAAGAAAGGGTGGAGAGGAGAACATTGAG
 
. : . : . : . : . : . :
JMFS143F09+ GTTGGCTCGATAAGTGCTGTTAGGAGCGTAAGTTGAGGTGTTGGGACAGAACTGTCCGAG
JMSF003H05+ GTTGGCTCGATAAGTGCTGTTTGGAGCGTAAGTAGAGGTGTTGGGACACAACTGGCCGAG
                      ____________________________________________________________
consensus GTTGGCTCGATAAGTGCTGTTTGGAGCGTAAGTTGAGGTGTTGGGACAGAACTGTCCGAG
 
. : . : . : . : . : . :
JMFS143F09+ AGGTTGAGAGGAAACTCCGGCGAACAGAGTGAGCAGGAAGAAGAAGATGCAGAGGGTGTA
JMSF003H05+ AGGTTGGGAGGAAACTCCGGCGAAGAGAGTGAGCAGGAAGAAGAAGATGCAGAGGGTGTA
                      ____________________________________________________________
consensus AGGTTGGGAGGAAACTCCGGCGAAGAGAGTGAGCAGGAAGAAGAAGATGCAGAGGGTGTA
 
. : . : . : . : . : . :
JMFS143F09+ GCCCAGC
JMSF003H05+ GTCCAGCCCCAGCTGAAAGCATCTGAATTGAGAATCCATAATTGTTTATTATTTTTGTTC
                      ____________________________________________________________
consensus GTCCAGCCCCAGCTGAAAGCATCTGAATTGAGAATCCATAATTGTTTATTATTTTTGTTC