| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022O18 | Sequence | 512 | 013208 (8) | emb|CBI35708.3| | 1e-60 | unnamed protein product [Vitis vinifera] | 792 | 013208 (8) | ref|XP_004507653.1| | 2e-83 | PREDICTED: tropinone reductase-like 3-like [Cicer arietinum] |
| JMFF031A22 | Sequence | 269 | 013208 (8) | ||||||||
| JMFF044M20 | Sequence | 633 | 013208 (8) | ref|XP_010647144.1| | 3e-83 | PREDICTED: tropinone reductase-like 3 [Vitis vinifera] | 575 | 013208 (8) | gb|AFK45209.1| | 7e-64 | unknown [Lotus japonicus] |
| JMFN033K07 | Sequence | 627 | 013208 (8) | ref|XP_010270063.1| | 1e-112 | PREDICTED: tropinone reductase-like 3 isoform X1 [Nelumbo nucifera] | |||||
| JMSF003A21 | Sequence | 288 | 013208 (8) | ref|XP_009626937.1| | 2e-16 | PREDICTED: tropinone reductase-like 3 [Nicotiana tomentosiformis] | 770 | 013208 (8) | gb|KHN03511.1| | 6e-112 | Dehydrogenase/reductase SDR family member 4 [Glycine soja] |
This contig is upended
. : . : . : . : . : . :
rJMFF044M20- ATAA
____________________________________________________________
consensus ATAA
. : . : . : . : . : . :
rJMFF031A22- TTTCTGATTATGAAAAGCTANGCTGTATACTACANAANATGACTTG
rJMFF044M20- CAATCTTTGCTTTATTTCTGATTATGAAAAGCTAAGCTGTATACTACAAAACATGACTTG
rJMFF022O18- TTTCTGATTATGAAAAGCTAAGCTGTATACTACAAAACATGACTTG
rJMSF003A21- GCTGTATACTACAAAACATGACTTG
____________________________________________________________
consensus CAATCTTTGCTTTATTTCTGATTATGAAAAGCTAAGCTGTATACTACAAAACATGACTTG
. : . : . : . : . : . :
rJMFF031A22- ATATCATNATATTCATGAATTCTTATTGGATTGATTGTTGAGATATATTATATAAAAGAA
rJMFF044M20- ATATCATCATATTCATGAATTCTTATTGGATTGATTGTTGAGATATATTATATAAAAGAA
rJMFF022O18- ATATCATCATATTCATGAATTCTTATTGGATTGATTGTTGAGATATATTATATAAAAGAA
rJMSF003A21- ATATCATCATATTCATGAATTCTTATTGGATTGATTGTTGAGATATATTATATAAAAGAA
____________________________________________________________
consensus ATATCATCATATTCATGAATTCTTATTGGATTGATTGTTGAGATATATTATATAAAAGAA
. : . : . : . : . : . :
rJMFF031A22- CTTGCNGGGAGATTGCCNGGAATCGAANAANATGGATCTTAGAGTCTGGANNGCTGCCCT
rJMFF044M20- CTTGCAGGGAGATTGCCAGGAATCAAAGAAGATGGATCTTAGAGTCTGGAAGGCTGCCCT
rJMFF022O18- CTTGCAGGGAGATTGCCAGGAATCAAAGAAGATGGATCTTAGAGTCTGGAAGGCTGCCCT
rJMSF003A21- CTTGCAGGGAGATTGCCAGGAATCAAAGAAGATGGATCTTAGAGTCTGGAAGGCTGCCCT
____________________________________________________________
consensus CTTGCAGGGAGATTGCCAGGAATCAAAGAAGATGGATCTTAGAGTCTGGAAGGCTGCCCT
. : . : . : . : . : . :
rJMFF031A22- CNANCNACTACCANATTTTCTCCGGTTATGTAGGAAGCTTCGTCAGATGCCANGAATGCG
rJMFF044M20- CCAGCAACTACCAGATTTTCTCCGGTTATGTAGGAAGCTTCGTCGGATGCCAAGAAGGCG
rJMFF022O18- CCAGCAACTACCAGATTTTCTCCGGTTATGTAGGAAGCTTCGTCGGATGCCAAGAAGGCG
rJMSF003A21- CCAGCAACTACCAGATTTTCTCCGGTTATGTAGGAAGCTTCGTCGGATGCCAAGAAGGCG
____________________________________________________________
consensus CCAGCAACTACCAGATTTTCTCCGGTTATGTAGGAAGCTTCGTCGGATGCCAAGAAGGCG
. : . : . : . : . : . :
rJMFF031A22- GCGGCAGNCNNNNTGTCTCCCACCTCTCCTAG
rJMFF044M20- GCGGCAGCCGCCATGTCTCCCACCTCTCCTAGTCTGTTGAGTAGTGTCTTTTCCTCAAGG
rJMFF022O18- GCGGCAGCCGCCATGTCTCCCACCTCTCCTAGTCTGTTGAGTAGTGTCTTTTCCTCAAGG
rJMSF003A21- GCGGCAGCCGCCATGTCTCCCACCTCTCCTAGTCTGTTGAGTAGTGTCTTTTCCTCAAGG
____________________________________________________________
consensus GCGGCAGCCGCCATGTCTCCCACCTCTCCTAGTCTGTTGAGTAGTGTCTTTTCCTCAAGG
. : . : . : . : . : . :
rJMFF044M20- GCTTTCCTCATTTCATTGTTGCTTGTTATGAAAGATGCGAAATTCGTGGGCACAAAACCA
rJMFF022O18- GCTTTCCTCATTTCATTGTTGCTTGTTATGAAAGATGCGAAATTCGTGGGCACAAAACCA
rJMSF003A21- GCTTTCCTCATTTCATTGTTGCTTGTTATGAAAGATGCGAAATTCGTGGGCACAAAACCA
JMFF044M20+ GAAATTCGTGGGCACAAAACCA
____________________________________________________________
consensus GCTTTCCTCATTTCATTGTTGCTTGTTATGAAAGATGCGAAATTCGTGGGCACAAAACCA
. : . : . : . : . : . :
rJMFF044M20- GGCGATATGCAGTTAACACGAGTATTCGGGGCCAGTTCAGCAGCAATAGCCTTGGTAAGC
rJMFF022O18- GGCGATATGCAGTTAACACGAGTATTCGGGGCCAGTTCAGCAGCAATAGCCTTGGTAAGC
rJMSF003A21- GGCGATATGCAGTTAACACGAGTATTCGGGGCCAGTTCAGCAGCAATAGCCTTGGTAAGC
JMFN033K07+ CAGTTAACACGAGTATTCGGTGCCATTTCAGCTGCAAGCGCCTTGGTAAGC
JMFF044M20+ GGCGATATGCAGTTAACACGAGTATTCGGGGCCAGTTCAGCAGCAATAGCCTTGGTAAGC
____________________________________________________________
consensus GGCGATATGCAGTTAACACGAGTATTCGGGGCCAGTTCAGCAGCAATAGCCTTGGTAAGC
. : . : . : . : . : . :
rJMFF044M20- CCGAAAAGGGCAGTTTTTGTCACTCCATACATCGACATTGCAGGAGGGGGATTGAAGCCA
rJMFF022O18- CCGAAAAGGGCAGTTTTTGTCACTCCATACATCGACATTGCAGGAGGGGGATTGAAGCCA
rJMSF003A21- CCGAAAAGGGCAGTTTTTGTCACTCCATACATCGACATTGCAGGAGGGGGATTGAAGCCA
JMFF022O18+ AGGGGGATTGAAGCCA
JMFN033K07+ CCAAAAAGAGCGGTTTTGGTCACTCCATACATTGACATTCCTTGTGGCGGGTTGAATCCA
JMFF044M20+ CCGAAAAGGGCAGTTTTTGTCACTCCATACATCGACATTGCAGGAGGGGGATTGAAGCCA
____________________________________________________________
consensus CCGAAAAGGGCAGTTTTTGTCACTCCATACATCGACATTGCAGGAGGGGGATTGAAGCCA
. : . : . : . : . : . :
rJMFF044M20- GCAATAGAGGAAATGAAAATAACAGATGAACCTTTCTGCAGATGAGGAGCTGCATCTTGC
rJMFF022O18- GCAATAGAGGAAATGAAAATAACAGATGAACCTTTCTGCAGATGAGGAGCTGCATCTTGC
rJMSF003A21- GCAATAGAGGAAATGAAAATAACAGATGAACCTTTCTGCAGATGAGGAGCTGCATCTTGC
JMFF022O18+ GCAATAGAGGAAATGAAAATAACAGATGACCCTTTCTGCAGATGAGGAGCTGCATCTTGC
JMFN033K07+ GTAATAGAAGAGATTAAAACGACAGATGAACCTTTCTGCATGTGAGGAGACGCATCTTGA
JMFF044M20+ GCAATAGAGGAAATGAAAATAACAGATGAACCTTTCTGCAGATGAGGAGCTGCATCTTGC
____________________________________________________________
consensus GCAATAGAGGAAATGAAAATAACAGATGAACCTTTCTGCAGATGAGGAGCTGCATCTTGC
. : . : . : . : . : . :
rJMFF044M20- AATAATAGTATAGAGGCTTTCACGTTGATCT
rJMFF022O18- AATAATAGTATAGAGGCTTTCACGTTGATCTCCCATAGCTTGTCAAGGACCGATTCTTTA
rJMSF003A21- AATAATAGTATAGAGGCTTTCACGTTGATCTCCCATAGCTTGTCAAGGACCGATTCTTTA
JMFF022O18+ AATAATAGTATAGAGGCTTTCACGTTGATCTCCCATAGCTTGTCAAGGACCGATTCTTTA
JMFN033K07+ AGTAGGAGTATAGAGGCTTTCACATTGATCTCCCATAGCTTGTCAAGGACAGATTCTTTA
JMFF044M20+ AATAATAGTATAGAGGCTTTCACGTTGATCTCCCATAGCTTGTCAAGGACCGATTCTTTA
____________________________________________________________
consensus AATAATAGTATAGAGGCTTTCACGTTGATCTCCCATAGCTTGTCAAGGACCGATTCTTTA
. : . : . : . : . : . :
rJMFF022O18- GTATTCAAGATTGGTTCTACAGACGGGTTGGCAGCAGCATTGGACACAATCACATCTATC
rJMSF003A21- GTATTCAAGATTGGTTCTACAGACGGGTTGGCAGCAGCATTGGACACAATCACATCTATC
JMFF022O18+ GTATTCAAGATTGGTTCTACAGACGGGTTGGCAGCAGCATTGGACACAATCACATCTATC
JMFN033K07+ GTTTCCAAAATTGAATCCACCGAAGGGTTGGCAGCAGCATTGGACACAATTACATCTATC
JMFF044M20+ GTATTCAAGATTGGTTCTACAGACGGGTTGGCAGCAGCATTGGACACAATCACATCTATC
____________________________________________________________
consensus GTATTCAAGATTGGTTCTACAGACGGGTTGGCAGCAGCATTGGACACAATCACATCTATC
. : . : . : . : . : . :
rJMFF022O18- CTT-CATATCTCTGAATAGTCTTCTCTATCAAATTCTTCCTGTGCAGTGCATTGGACACA
rJMSF003A21- CTTCCATATCTCTGAATAGTCTTCTCTATCAAATTCTTCCTGTGCAGTGCATTGGACACA
JMFF022O18+ CTT-CATATCTCTGAATAGTCTTCTCTATCAAATTCTTCCTGTGCAGTGCATTGGACACA
JMFN033K07+ TTTCCATATTTCTGCACTGTCCTCTCTACCAAATTCTTCCTATGCTCTGCATTTGACACG
JMFF044M20+ CTT-CATATCTCTGAATAGTCTTCTCTATCAAATTCTTCCTGTGCAGTGCATTGGACACA
____________________________________________________________
consensus CTT-CATATCTCTGAATAGTCTTCTCTATCAAATTCTTCCTGTGCAGTGCATTGGACACA
. : . : . : . : . : . :
rJMFF022O18- TGGCAAACTAATCCCAACGCTTCAATCCCTTTACTCCTCAAACTCTCCACTGCTTCATCC
rJMSF003A21- TGGCAAACTAATCCCAACGCTTCAATCCCTTTACTCCTCAAACTCTCCACTGCTTCATCC
JMFF022O18+ TGGCAAACTAATCCCAACGCTTCAATCCCTTTACTCCTCAAACTCTCCACTGCTTCATCC
JMFN033K07+ TGGCATACTACTCCCAACACTTCAATGCCTTTACTCCTCAGTTTCTCAACTGCTTCATCC
JMFF044M20+ TGGCAAACTAATCCCAACGCTTCAATCCCTTTACTCCTCAAACTCTCCACTGCTTCATCC
____________________________________________________________
consensus TGGCAAACTAATCCCAACGCTTCAATCCCTTTACTCCTCAAACTCTCCACTGCTTCATCC
. : . : . : . : . : . :
rJMFF022O18- ACATTTTTCTGTTTGCGA
rJMSF003A21- ACATTTTTCTGTTTGCGAG
JMFF022O18+ ACATTTTTCTGTTTGCGAGAGGAGATGACGACGG
JMFN033K07+ ACATTTTTCTGCTTGCGAGAAGAGATGACAACGG
JMFF044M20+ ACATTTTTCTGTTTGCGAGAGGAGATGACGACGGAGGCGCCTTCTAAACCTAGGCGTTCG
JMSF003A21+ TTGCGAGAGGAGATGACGACGGAGGCGCCTTCTAAACCTAGGCGTTCG
____________________________________________________________
consensus ACATTTTTCTGTTTGCGAGAGGAGATGACGACGGAGGCGCCTTCTAAACCTAGGCGTTCG
. : . : . : . : . : . :
JMFF044M20+ GCGATTCCGAAGCCGATCCCTTGTGTTGAAGCCGTGACAATCGCCACCTTCCCTTGAAAT
JMSF003A21+ GCGATTCCGAAGCCGATCCCTTGTGTTGAAGCCGTGACAATCGCCACCTTCCCTTGAAAT
____________________________________________________________
consensus GCGATTCCGAAGCCGATCCCTTGTGTTGAAGCCGTGACAATCGCCACCTTCCCTTGAAAT
. : . : . : . : . : . :
JMFF044M20+ CTCTTACCGAACTTGTCCATTCGTTCCTGCTTTGTCCTCGGAAACAACAAAACTTAGACT
JMSF003A21+ CTCTTACCGAACTTGTCCATTCGTTCCTGCTTTGTCCTCGGAAACAACAAAACTTAGACT
____________________________________________________________
consensus CTCTTACCGAACTTGTCCATTCGTTCCTGCTTTGTCCTCGGAAACAACAAAACTTAGACT
. : . : . : . : . : . :
JMFF044M20+ AGACCAAACCTA
JMSF003A21+ AGACCAAACCTATGTACGATCTGAACGAGGTCTCTGCGTACTTTATAGCGCCGGCCGGGC
____________________________________________________________
consensus AGACCAAACCTATGTACGATCTGAACGAGGTCTCTGCGTACTTTATAGCGCCGGCCGGGC
. : . : . : . : . : . :
JMSF003A21+ TCCCCCTCTGTTATTGGATAAGTTCACTTCCAAGAAATTTTGTCGGTATAGAAATTCCTC
____________________________________________________________
consensus TCCCCCTCTGTTATTGGATAAGTTCACTTCCAAGAAATTTTGTCGGTATAGAAATTCCTC