Contig 013205:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS109D07Sequence616013205 (4)ref|XP_009620790.1|3e-23PREDICTED: UBA and UBX domain-containing protein At4g15410-like [Nicotiana tome
JMFS114C01Sequence621013205 (4)ref|XP_010244155.1|1e-78PREDICTED: UBA and UBX domain-containing protein At4g15410 [Nelumbo nucifera]
JMSF002G10Sequence480013205 (4)ref|XP_009620790.1|4e-17PREDICTED: UBA and UBX domain-containing protein At4g15410-like [Nicotiana tome716013205 (4)ref|XP_009788329.1|2e-91PREDICTED: UBA and UBX domain-containing protein At4g15410-like [Nicotiana sylv

Alignment

This contig is upended


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rJMSF002G10-                                                            AAATGGCAAA
                      ____________________________________________________________
consensus                                                               AAATGGCAAA
 
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rJMSF002G10-          TAAAATGGCATGATGCCTTAAGCTTCCATCAATAGCAGCTCATACTTGAACTGAATTTAG
                      ____________________________________________________________
consensus             TAAAATGGCATGATGCCTTAAGCTTCCATCAATAGCAGCTCATACTTGAACTGAATTTAG
 
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rJMSF002G10-          TACATAATTTTCACTGATGGTATATAAATTGGAATGTTACCTAGCATGATTTGCTGAAGC
                      ____________________________________________________________
consensus             TACATAATTTTCACTGATGGTATATAAATTGGAATGTTACCTAGCATGATTTGCTGAAGC
 
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rJMSF002G10-          CTGAACGTAAATAAAGATTCGAATAAGCTAAACTCTCTGGATAACAACCGAATTGGCTAG
                      ____________________________________________________________
consensus             CTGAACGTAAATAAAGATTCGAATAAGCTAAACTCTCTGGATAACAACCGAATTGGCTAG
 
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rJMSF002G10-          CCCGGCTTGCTCTATTGTCTGCTCCAGATCGGTAAGTTGCTTCGGAGGAAACCCCACTGT
                      ____________________________________________________________
consensus             CCCGGCTTGCTCTATTGTCTGCTCCAGATCGGTAAGTTGCTTCGGAGGAAACCCCACTGT
 
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rJMSF002G10-          CTGCAGTTGGTAGGTCCTCGGACCACTGGGCCTTGATGCATCGATGAATCCTCGAATATC
                      ____________________________________________________________
consensus             CTGCAGTTGGTAGGTCCTCGGACCACTGGGCCTTGATGCATCGATGAATCCTCGAATATC
 
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rJMSF002G10-          TCTGATTGTGTGGTGGATGTTGAACCGGGAAACCATGCGTGTGCCATCAGCGAGCCTGAG
JMFS114C01+                                                                    GAG
                      ____________________________________________________________
consensus             TCTGATTGTGTGGTGGATGTTGAACCGGGAAACCATGCGTGTGCCATCAGCGAGCCTGAG
 
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rJMSF002G10-          CTGAATTGACGTGGAAGGTTGGGTTTCATCAACGACGAGACCCATGGCTGGGGCAGGAGC
JMFS114C01+           CTGAATTGACGTGGAAGGTTGGGTTTCATCAACGACGAGACCCATGGCTGGGGCAGGAGC
                      ____________________________________________________________
consensus             CTGAATTGACGTGGAAGGTTGGGTTTCATCAACGACGAGACCCATGGCTGGGGCAGGAGC
 
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rJMSF002G10-          AGAGGTTAAGGGAGCGGTTGCAACTGTTGTCTCTACTGGTGCATCGTCATTAGTAGTGCC
JMFS114C01+           AGAGGTTAAGGGAGCGGTTGCAACTGTTGTCTCTACTGGTGCATCGTCATTAGTAGTGCC
                      ____________________________________________________________
consensus             AGAGGTTAAGGGAGCGGTTGCAACTGTTGTCTCTACTGGTGCATCGTCATTAGTAGTGCC
 
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rJMSF002G10-          ACCTAAGGTTCTTCCTACACCCTGAAATGGTGTTTTCCGCTTCGCTGGTGCCGGGCAGTT
JMFS114C01+           ACCTAAGGTTCTTCCTACACCCTGAAATGGTGTTTTCCGCTTCGCTGGTGCCGGGCAGTT
                      ____________________________________________________________
consensus             ACCTAAGGTTCTTCCTACACCCTGAAATGGTGTTTTCCGCTTCGCTGGTGCCGGGCAGTT
 
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rJMSF002G10-          CTCCTCTCTCCTTGTGAGATTAACATGGACCGCTGTCCTCCTGTCTGGTGGCTGAAGTTC
JMFS114C01+           CTCCTCTCTCCTTGTGAGATTAACATGGACCGCTGTCCTCCTGTCTGGTGGCTGAAGTTC
                      ____________________________________________________________
consensus             CTCCTCTCTCCTTGTGAGATTAACATGGACCGCTGTCCTCCTGTCTGGTGGCTGAAGTTC
 
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rJMSF002G10-          CTTTGGGCACTCGGAATTCCTTATACTCTCCAAAAAGTGTGCATTTTCAGGATCATCCAT
JMFS114C01+           CTTTGGGCACTCGGAATTCCTTATACTCTCCAAAAAGTGTGCATTTTCAGGATCATCCAT
                      ____________________________________________________________
consensus             CTTTGGGCACTCGGAATTCCTTATACTCTCCAAAAAGTGTGCATTTTCAGGATCATCCAT
 
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rJMSF002G10-          CCTTCTGAGAGGTCCATCATCTACCGTGAACCCATTGCTCCAGAAA              
JMFS114C01+           CCTTCTGAGAGGTCCATCATCTACCGTGAACCCATTGCTCCAGAAAGTGATATTATGGGT
                      ____________________________________________________________
consensus             CCTTCTGAGAGGTCCATCATCTACCGTGAACCCATTGCTCCAGAAAGTGATATTATGGGT
 
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JMFS114C01+           AACAACTTCAGGTCGCTGAGGAGCAGAAGGAACAGTTTCACCAGTGAGTCGCCGTGCAGT
                      ____________________________________________________________
consensus             AACAACTTCAGGTCGCTGAGGAGCAGAAGGAACAGTTTCACCAGTGAGTCGCCGTGCAGT
 
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JMFS114C01+           TCCAGTAAAGCTTCTTGAACTTGACGGAGGAAGATTCTCAACAGGTCCACCTACAGGTTG
JMFS109D07+                                        GAAGATTCTCAACAGGTCCACCTACAGGTTG
                      ____________________________________________________________
consensus             TCCAGTAAAGCTTCTTGAACTTGACGGAGGAAGATTCTCAACAGGTCCACCTACAGGTTG
 
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JMFS114C01+           AGTCTGTCTGGCTTGGTTAAATATTGCATCCACATCATTCACTTTGGATGGATCTTGAAC
JMFS109D07+           AGTCTGTCTGGCTTGGTTAAATATTGCATCCACATCATTCACTTTGGATGGATCTTGAAC
                      ____________________________________________________________
consensus             AGTCTGTCTGGCTTGGTTAAATATTGCATCCACATCATTCACTTTGGATGGATCTTGAAC
 
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JMFS114C01+           AAGCATTCCACT                                                
JMFS109D07+           AAGCATTCCACTTTTTTCTCCACCAGTATAGTACTCCTGAGGCTCATCGGAGTCGCTCCC
                      ____________________________________________________________
consensus             AAGCATTCCACTTTTTTCTCCACCAGTATAGTACTCCTGAGGCTCATCGGAGTCGCTCCC
 
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JMFS109D07+           GGATCCTGCAGCGGTTCGACGATTCAGATCAGCGAAGGTATGAATCCCGCCACTCCGCCG
JMSF002G10+           GGATCCTGCAGCGGTTCGACGATTCAGATCAGCGAAGGTATGAATCCCGCCANTCCGCCG
                      ____________________________________________________________
consensus             GGATCCTGCAGCGGTTCGACGATTCAGATCAGCGAAGGTATGAATCCCGCCACTCCGCCG
 
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JMFS109D07+           GCCAGCACCACTACCGCCAGGGGCTGATGCGTTCCCGTGTTTAGAAGACCGGAGATTATA
JMSF002G10+           GCCAGCACCACTACCGCCAGGGGCTGATGCGTTCCCGTGTTTAGAAGACCGGAGATTATA
                      ____________________________________________________________
consensus             GCCAGCACCACTACCGCCAGGGGCTGATGCGTTCCCGTGTTTAGAAGACCGGAGATTATA
 
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JMFS109D07+           CGCGCCGGAAGGCTGGGGCTGTTTGGAGCGACGGCGAGGGGAAGGGGATCGCGAGCGAGG
JMSF002G10+           CGCGCCGGAAGGCTGGGGCTGTTTGGAGCGACGGCGAGGGGAAGGGGATCGCGAGCGAGG
                      ____________________________________________________________
consensus             CGCGCCGGAAGGCTGGGGCTGTTTGGAGCGACGGCGAGGGGAAGGGGATCGCGAGCGAGG
 
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JMFS109D07+           CGGAGAGGAAGACTCGGATTGGGAAGGGGAGTAGGGCAGGGAGTCAGCAGGGGAGTGTGC
JMSF002G10+           CGGAGAGGAAGACTCGGATTGGGAAGGGGAGTAGGGCAGGGAGTCAGCAGGGGAGTGTGC
                      ____________________________________________________________
consensus             CGGAGAGGAAGACTCGGATTGGGAAGGGGAGTAGGGCAGGGAGTCAGCAGGGGAGTGTGC
 
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JMFS109D07+           GTTGGCCGTAGCGGCGGAGACGGCGGCGGGAGCGGGAACGTCGGCGGAGGGGTCGGCGGG
JMSF002G10+           GTTGGCCGTAGCGGCGGAGACGGCGGCGGGAGCGGGAACGTCGGCGGAGGGGTCGGCGGG
                      ____________________________________________________________
consensus             GTTGGCCGTAGCGGCGGAGACGGCGGCGGGAGCGGGAACGTCGGCGGAGGGGTCGGCGGG
 
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JMFS109D07+           ATTGGTTTCGAAGTAGGTGGAGACGGCGGAGTCCAAGTCGAAGTTGTGGCTCTCGAGGTA
JMSF002G10+           ATTGGTTTCGAAGTAGGTGGAGACGGCGGAGTCCAAGTCGAAGTTGTGGCTCTCGAGGTA
                      ____________________________________________________________
consensus             ATTGGTTTCGAAGTAGGTGGAGACGGCGGAGTCCAAGTCGAAGTTGTGGCTCTCGAGGTA
 
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JMFS109D07+           GAAGAGAGCTTCGGGATTGGTAGAAGAAGTGATTTCGCAGAATGTATTGATTAGGGTTTC
JMSF002G10+           GAAGAGAGCTTCGGGATTGGTAGAAGAAGTGATTTCGCAGAATGTATTGATTAGGGTTTC
                      ____________________________________________________________
consensus             GAAGAGAGCTTCGGGATTGGTAGAAGAAGTGATTTCGCAGAATGTATTGATTAGGGTTTC
 
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JMFS109D07+           CCTTTCCGGGTTGAGATCGCTCTGGTTTTCCATGGCTTCTCTGCT               
JMSF002G10+           CCTTTCCGGGTTGAGATCGCTCTGGTTTTCCATGGCTTCTCTGCTTTCTGAGTTCTCTCC
                      ____________________________________________________________
consensus             CCTTTCCGGGTTGAGATCGCTCTGGTTTTCCATGGCTTCTCTGCTTTCTGAGTTCTCTCC