Contig 013198:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS021H01Sequence600013198 (5)emb|CDO99822.1|1e-24unnamed protein product [Coffea canephora]
JMFS038B07Sequence637013198 (5)emb|CDO99822.1|3e-31unnamed protein product [Coffea canephora]
JMFS073D04Sequence636013198 (5)emb|CDO99822.1|4e-33unnamed protein product [Coffea canephora]
JMFS146B07Sequence627013198 (5)emb|CDO99822.1|1e-29unnamed protein product [Coffea canephora]
JMFS168F09Sequence593013198 (5)emb|CDO99822.1|3e-22unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFS073D04+                     TGGCTGCAGATGACTCAGCCAGATCATCACCTTCTAAGTCGGACCTCCTC
JMFS021H01+                                                                  TCCTC
JMFS146B07+                                       CCAGATCATCACCTTCTAAGTCGGACCTCCTC
JMFS038B07+                              ATGACTCAGCCAGATCATCACCTTCTAAGTCGGACCTCCTC
                      ____________________________________________________________
consensus                       TGGCTGCAGATGACTCAGCCAGATCATCACCTTCTAAGTCGGACCTCCTC
 
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JMFS073D04+           CTCCTCCTGACAAGTTGCTCACCCTCATCATCATCATCCTCCGTGTTCCTAGCAGAACTG
JMFS021H01+           CTCCTCCTGACAAGTTGCTCACCCTCATCATCATCATCCTCCGTGTTCCTAGCAGAACTG
JMFS146B07+           CTCCTCCTGACAAGTTGCTCACCCTCATCATCATCATCCTCCGTGTTCCTAGCAGAACTG
JMFS038B07+           CTCCTCCTGACAAGTTGCTCACCCTCATCATCATCATCCTCCGTGTTCCTAGCAGAACTG
JMFS168F09+                  TGACAAGTTGCTCACCCTCATCATCATCATCCTCCGTGTTCCTAGCAGAACTG
                      ____________________________________________________________
consensus             CTCCTCCTGACAAGTTGCTCACCCTCATCATCATCATCCTCCGTGTTCCTAGCAGAACTG
 
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JMFS073D04+           CATGACTCATATGACATACATCCATCCAAATGGCCACGCATCAGCTCCTCGAGCCCCCTC
JMFS021H01+           CATGACTCATATGACATACATCCATCCAAATGGCCACGCATCAGCTCCTCGAGCCCCCTC
JMFS146B07+           CATGACTCATATGACATACATCCATCCAAATGGCCACGCATCAGCTCCTCGAGCCCCCTC
JMFS038B07+           CATGACTCATATGACATACATCCATCCAAATGGCCACGCATCAGCTCCTCGAGCCCCCTC
JMFS168F09+           CATGACTCATATGACATACATCCATCCAAATGGCCACGCATCAGCTCCTCGAGCCCCCTC
                      ____________________________________________________________
consensus             CATGACTCATATGACATACATCCATCCAAATGGCCACGCATCAGCTCCTCGAGCCCCCTC
 
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JMFS073D04+           TCAAATTCAACACGTGCATTATCAGCCGTGCTCTCGGGCTTCTGTTGAAGCTGTTGCTGA
JMFS021H01+           TCAAATTCAACACGTGCATTATCAGCCGTGCTCTCGGGCTTCTGTTGAAGCTGTTGCTGA
JMFS146B07+           TCAAATTCAACACGTGCATTATCAGCCGTGCTCTCGGGCTTCTGTTGAAGCTGTTGCTGA
JMFS038B07+           TCAAATTCAACACGTGCATTATCAGCCGTGCTCTCGGGCTTCTGTTGAAGCTGTTGCTGA
JMFS168F09+           TCAAATTCAACACGTGCATTATCAGCCGTGCTCTCGGGCTTCTGTTGAAGCTGTTGCTGA
                      ____________________________________________________________
consensus             TCAAATTCAACACGTGCATTATCAGCCGTGCTCTCGGGCTTCTGTTGAAGCTGTTGCTGA
 
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JMFS073D04+           ACATCTGCCATTTCTTAAATCGACTATCCCAAAACCTAACACTCAGCAAACATCACCACC
JMFS021H01+           ACATCTGCCATTTCTTAAATCGACTATCCCAAAACCTAACACTCAGCAAACATCACTACC
JMFS146B07+           ACATCTGCCATTTCTTAAATCGACTATCCCAAAACCTAACACTCAGCAAACATCACCACC
JMFS038B07+           ACATCTGCCATTTCTTAAATCGACTATCCCAAAACCTAACACTCAGCAAACATCACCACC
JMFS168F09+           ACATCTGCCATTTCTTAAATCGACTATCCCAAAACCTAACACTCAGCAAACATCACCACC
                      ____________________________________________________________
consensus             ACATCTGCCATTTCTTAAATCGACTATCCCAAAACCTAACACTCAGCAAACATCACCACC
 
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JMFS073D04+           ACTAAATGAACCTAAAAATAGACTACCTTAACTACAGAAGAATTCACACTCCTCCATTAC
JMFS021H01+           ACTAAATGAACCTAAAAATAGACTACCTTAACTACAGAAGAATTCACACTCCTCCATTAC
JMFS146B07+           ACTAAATGAACCTAAAAATAGACTACCTTAACTACAGAAGAATTCACACTCCTCCATTAC
JMFS038B07+           ACTAAATGAACCTAAAAATAGACTACCTTAACTACAGAAGAATTCACACTCCTCCATTAC
JMFS168F09+           ACTAAATGAACCTAAAAATAGACTACCTTAACTACAGAAGAATTCACACTCCTCCATTAC
                      ____________________________________________________________
consensus             ACTAAATGAACCTAAAAATAGACTACCTTAACTACAGAAGAATTCACACTCCTCCATTAC
 
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JMFS073D04+           TGAGATGGAGATTTTTCACATGTAACTCCATTGATTAAGAAAATAAAAAAGAAATAAAGG
JMFS021H01+           TGAGATGGAGATTTTTCACATGTAACTCCATTGATTAAGAAAATAAAAAAGAAATAAAGG
JMFS146B07+           TGAGATGGAGATTTTTCACATGTAACTCCATTGATTAAGAAAATAAAAAAGAAATAAAGG
JMFS038B07+           TGAGATGGAGATTTTTCACATGTAACTCCATTGATTAAGAAAATAAAAAAGAAATAAAGG
JMFS168F09+           TGAGATGGAGATTTTTCACATGTAACTCCATTGATTAAGAAAATAAAAAAGAAATAAAGG
                      ____________________________________________________________
consensus             TGAGATGGAGATTTTTCACATGTAACTCCATTGATTAAGAAAATAAAAAAGAAATAAAGG
 
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JMFS073D04+           GAAAAACCTAAAGCTAACTGAAAACCTAAACATAATTTAACATCATCAAATATCATCAAA
JMFS021H01+           GAAAAACCTAAAGCTAACTGAAAACCTAAACATAATTTAACATCATCAAATATCATCAAA
JMFS146B07+           GAAAAACCTAAAGCTAACTGAAAACCTAAACATAATTTAACATCATCAAATATCATCAAA
JMFS038B07+           GAAAAACCTAAAGCTAACTGAAAACCTAAACATAATTTAACATCATCAAATATCATCAAA
JMFS168F09+           GAAAAACCTAAAGCTAACTGAAAACCTAAACATAATTTAACATCATCAAATATCATCAAA
                      ____________________________________________________________
consensus             GAAAAACCTAAAGCTAACTGAAAACCTAAACATAATTTAACATCATCAAATATCATCAAA
 
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JMFS073D04+           TTACGACATAAGCGGTGCTTTTTCGATACAATCGAATCACTCGTTGGACACATCACCTGT
JMFS021H01+           TTACGACATAAGCGGTGCTTTTTCGATACAATCGAATCACTCGTTGGACACATCACCTGT
JMFS146B07+           TTACGACATAAGCGGTGCTTTTTCGATACAATCGAATCACTCGTTGGACACATCACCTGT
JMFS038B07+           TTACGACATAAGCGGTGCTTTTTCGATACAATCGAATCACTCGTTGGACACATCACCTGT
JMFS168F09+           TTACGACATAAGCGGTGCTTTTTCGATACAATCGAATCACTCGTTGGACACATCACCTGT
                      ____________________________________________________________
consensus             TTACGACATAAGCGGTGCTTTTTCGATACAATCGAATCACTCGTTGGACACATCACCTGT
 
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JMFS073D04+           GAAGTGTGTGAATCAAAACCCTAATCTATTTTCCGAAACAATAATATTATCTTTTGTTTA
JMFS021H01+           GAAGTGTGTGAATCAAAACCCTAATCTATTTTCAGAAACAATAATATTATCTTTTGTTTA
JMFS146B07+           GAAGTGTGTGAATCAAAACCCTAATCTATTTTCCGAAACAATAATATTATCTTTTGTTTA
JMFS038B07+           GAAGTGTGTGAATCAAAACCCTAATCTATTTTCCGAAACAATAATATTATCTTTTGTTTA
JMFS168F09+           GAAGTGTGTGAATCAAAACCCTAATCTATTTTCCGAAACAATAATATTATCTTTTGTTTA
                      ____________________________________________________________
consensus             GAAGTGTGTGAATCAAAACCCTAATCTATTTTCCGAAACAATAATATTATCTTTTGTTTA
 
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JMFS073D04+           TATGCACACAAATGTCTTATATAAATAGATATAGAAGCAATAGAAG              
JMFS021H01+           TATGCACACAAATGTCTTATATAAATAGATATAGAAGCAATAGAAGGTAGAGAAA     
JMFS146B07+           TATGCACACAAATGTCTTATATAAATAGATATAGAAGCAATAGAAGGTAGAGAAA     
JMFS038B07+           TATGCACACAAATGTCTTATATAAATAGATATAGAAGCAATAGAAGGTAGAGAAA     
JMFS168F09+           TATGCACACAAATGTCTTATATAAATAGATATAGAAGCAATAGAAGGTAGAGAAATATGG
                      ____________________________________________________________
consensus             TATGCACACAAATGTCTTATATAAATAGATATAGAAGCAATAGAAGGTAGAGAAATATGG