Contig 013191:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006H15Sequence591013191 (4)ref|XP_004242916.1|5e-15PREDICTED: cornifin-A-like [Solanum lycopersicum]
JMFN033H17Sequence594013191 (4)ref|XP_004242916.1|5e-15PREDICTED: cornifin-A-like [Solanum lycopersicum]
JMFN037K11Sequence577013191 (4)ref|XP_004242916.1|5e-15PREDICTED: cornifin-A-like [Solanum lycopersicum]
JMFS159F11Sequence473013191 (4)ref|XP_004242916.1|3e-15PREDICTED: cornifin-A-like [Solanum lycopersicum]

Alignment

This contig is upended


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JMFN033H17+                                                            GATGAAATCAA
JMFN037K11+                                                                AAATCAA
JMFN006H15+                                                                AAATCAA
                      ____________________________________________________________
consensus                                                              GATGAAATCAA
 
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JMFN033H17+           GAAAATATCTATCCATTATGCTTTCATATGTCAAAGCCTNTGAGACATGTTTCTTGTTCA
JMFN037K11+           GAAAATATCTATCCATTATGCTTTCATATGTCAAAGCCTTTGAGACATGTTTCTTGTTCA
JMFN006H15+           GAAAATATCTATCCATTATGCTTTCATATGTCAAAGCCTTTGAGACATGTTTCTTGTTCA
                      ____________________________________________________________
consensus             GAAAATATCTATCCATTATGCTTTCATATGTCAAAGCCTTTGAGACATGTTTCTTGTTCA
 
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JMFN033H17+           CTTGAATGTTGTGTTTTCACTTATGAATGGTTGTACTAGGAATAACAATATGAAATACAA
JMFN037K11+           CTTGAATGTTGTGTTTTCACTTATGAATGGTTGTACTAGGAATAACAATATGAAATACAA
JMFN006H15+           CTTGAATGTTGTGTTTTCACTTATGAATGGTTGTACTAGGAATAACAATATGAAATACAA
                      ____________________________________________________________
consensus             CTTGAATGTTGTGTTTTCACTTATGAATGGTTGTACTAGGAATAACAATATGAAATACAA
 
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JMFN033H17+           AAGCAAGATGAGTAATGAAACTGGGGATAGAAAGGATTATGACACTCCAGGAATTCTGCA
JMFN037K11+           AAGCAAGATGAGTAATGAAACTGGGGATAGAAAGGATTATGACACTCCAGGAATTCTGCA
JMFN006H15+           AAGCAAGATGAGTAATGAAACTGGGGATAGAAAGGATTATGACACTCCAGGAATTCTGCA
                      ____________________________________________________________
consensus             AAGCAAGATGAGTAATGAAACTGGGGATAGAAAGGATTATGACACTCCAGGAATTCTGCA
 
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JMFN033H17+           GAAAGTAGCATTCAAGGGAACTATGGGTTTCCTGGGAGTTGAGGCACTGGCTTTTGCAGA
JMFN037K11+           GAAAGTAGCATTCAAGGGAACTATGGGTTTCCTGGGAGTTGAGGCACTGGCTTTTGCAGA
JMFN006H15+           GAAAGTAGCATTCAAGGGAACTATGGGTTTCCTGGGAGTTGAGGCACTGGCTTTTGCAGA
JMFS159F11+                  GCATTCAAGGGAACTATGGGTTTCCTGGGAGTTGAGGCACTGGCTTTTGCAGA
                      ____________________________________________________________
consensus             GAAAGTAGCATTCAAGGGAACTATGGGTTTCCTGGGAGTTGAGGCACTGGCTTTTGCAGA
 
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JMFN033H17+           GCTGGAAACTCGGGCCTTGGTCTGAATGGCATCACTGGTCTTCGGGTTGTAGGCCCTTCG
JMFN037K11+           GCTGGAAACTCGGGCCTTGGTCTGAATGGCATCACTGGTCTTCGGGTTGTAGGCCCTTCG
JMFN006H15+           GCTGGAAACTCGGGCCTTGGTCTGAATGGCATCACTGGTCTTCGGGTTGTAGGCCCTTCG
JMFS159F11+           GCTGGAAACTCGGGCCTTGGTCTGAATGGCATAACTGGTCTTCGGGTTGTAGGCCCTTCG
                      ____________________________________________________________
consensus             GCTGGAAACTCGGGCCTTGGTCTGAATGGCATCACTGGTCTTCGGGTTGTAGGCCCTTCG
 
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JMFN033H17+           GGTTTTGGGAATGCTGGCAGCTCGTGCTCCGGGACTGTTGGCAGCTGTGGCTTTTCTGGC
JMFN037K11+           GGTTTTGGGAATGCTGGCAGCTCGTGCTCCGGGACTGTTGGCAGCTGTGGCTTTTCTGGC
JMFN006H15+           GGTTTTGGGAATGCTGGCAGCTCGTGCTCCGGGACTGTTGGCAGCTGTGGCTTTTCTGGC
JMFS159F11+           GGTTTTGGGAATGCTGGCAGCTCGTGCTCCGGGACTGTTGGCAGCTGTGGCTTTTCTGGC
                      ____________________________________________________________
consensus             GGTTTTGGGAATGCTGGCAGCTCGTGCTCCGGGACTGTTGGCAGCTGTGGCTTTTCTGGC
 
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JMFN033H17+           ATTGGGAATTCAGGCACTTCAAGTACATGGTTTGGTACTCTGGGGATTTCGGGAATTGGC
JMFN037K11+           ATTGGGAATTCAGGCACTTCAAGTACATGGTTTGGTACTCTGGGGATTTCGGGAATTGGC
JMFN006H15+           ATTGGGAATTCAGGCACTTCAAGTACATGGTTTGGTACTCTGGGGATTTCGGGAATTGGC
JMFS159F11+           ATTGGGAATTCAGGCACTTCAAGTACATGGTTTGGTACTCTGGGGATTTCGGGAATTGGC
                      ____________________________________________________________
consensus             ATTGGGAATTCAGGCACTTCAAGTACATGGTTTGGTACTCTGGGGATTTCGGGAATTGGC
 
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JMFN033H17+           AGTTCGGGCAAGGTTGTTGTCTCCAGAAAACGCCGTGCCTCTGTCTGAACCATAATGGAG
JMFN037K11+           AGTTCGGGCAAGGTTGTTGTCTCCAGAAAACGCCGTGCCTCTGTCTGAACCATGATGGAG
JMFN006H15+           AGTTCGGGCAAGGTTGTTGTCTCCAGAAAACGCCGTGCCTCTGTCTGAACCATGATGGAG
JMFS159F11+           AGTTCGGGCAAGGTTGTTGTCTCCAGAAAACGCCGTGCCTCTGTCTGAACCATGATGGAG
                      ____________________________________________________________
consensus             AGTTCGGGCAAGGTTGTTGTCTCCAGAAAACGCCGTGCCTCTGTCTGAACCATGATGGAG
 
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JMFN033H17+           GTGGTTGCTGACAGAGTGACCAGGAAAACCAAGAACAGGTATGGTGGATTGAAGTGATGA
JMFN037K11+           GTGGTTGCTGACAGAGTGACCAGGAAAACCAAGAACAGGTATGGTGGATTGAAGTGATGA
JMFN006H15+           GTGGTTGCTGACAGAGTGACCAGGAAAACCAAGAACAGGTATGGTGGATTGAAGTGATGA
JMFS159F11+           GTGGTTGCTGACAGAGTGACCAGGAAAACCAAGAACAGGTATGGTGGATTGAAGTGATGA
                      ____________________________________________________________
consensus             GTGGTTGCTGACAGAGTGACCAGGAAAACCAAGAACAGGTATGGTGGATTGAAGTGATGA
 
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JMFN033H17+           GCCATTCTGGGTGCAGATTGATGTTGTCAGGCGAACCGGTTTC                 
JMFN037K11+           GCCATTCTGGGTGCAGATTGATGTTGTCAG                              
JMFN006H15+           GCCATTCTGGGTGCAGATTGATGTTGTCAGGCGAACCGGTTTC                 
JMFS159F11+           GCCATTCTGGGTGCAGATTGATGTTGTCAGGCGAACCGGTTTCTGCTTTGATCAAGTCAA
                      ____________________________________________________________
consensus             GCCATTCTGGGTGCAGATTGATGTTGTCAGGCGAACCGGTTTCTGCTTTGATCAAGTCAA
 
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JMFS159F11+           TATGCTCTTGGCATGTAACATGATGAGTTTATATAGGAGATGGGATGTAGTGAAAAGGCA
                      ____________________________________________________________
consensus             TATGCTCTTGGCATGTAACATGATGAGTTTATATAGGAGATGGGATGTAGTGAAAAGGCA