Contig 013185:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044P02Sequence565018474gb|ADN88094.1|1e-33homeodomain-leucine zipper protein HD3 [Gossypium hirsutum]389013185 (2)
JMFS155F04Sequence421013185 (2)ref|XP_006352352.1|1e-14PREDICTED: tonoplast dicarboxylate transporter-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF044P02+ GAAGAGGATGATGGCAGTGATGATGGACAGAACAACTACTTCTCCGCCATGTTTGTGG
                      ____________________________________________________________
consensus GAAGAGGATGATGGCAGTGATGATGGACAGAACAACTACTTCTCCGCCATGTTTGTGG
 
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rJMFF044P02+ CGGCAGAGCAGCCTCGGCCACCATGATGATGATGATGGAGAGCCACTCGGATGGTTCTGG
                      ____________________________________________________________
consensus CGGCAGAGCAGCCTCGGCCACCATGATGATGATGATGGAGAGCCACTCGGATGGTTCTGG
 
. : . : . : . : . : . :
rJMFF044P02+ TCTTAGACTATATATTTAGTTTTTTGTTTTTGGTTTTAGTTTACTATGTTCAATAATGGT
                      ____________________________________________________________
consensus TCTTAGACTATATATTTAGTTTTTTGTTTTTGGTTTTAGTTTACTATGTTCAATAATGGT
 
. : . : . : . : . : . :
rJMFF044P02+ GTTGGATGTTTCCTCTATCTATGTCATGTGTGCAGTAGTATCACAAGAATCTCCCTGGAA
                      ____________________________________________________________
consensus GTTGGATGTTTCCTCTATCTATGTCATGTGTGCAGTAGTATCACAAGAATCTCCCTGGAA
 
. : . : . : . : . : . :
rJMFF044P02+ GCTCTGATCTATTGCATATATATATATATATATATATATATATATATATATATATGTGTG
JMFS155F04+ TATATATATATATATATATATATATATATGTGTG
                      ____________________________________________________________
consensus GCTCTGATCTATTGCATATATATATATATATATATATATATATATATATATATATGTGTG
 
. : . : . : . : . : . :
rJMFF044P02+ TGTGTGTGTGTGT
JMFS155F04+ TGTGTGTGTGTGTGTGTGTGTGTATGTATTCAATGTATAAAGAACTTTGTAGTTGTGGGA
                      ____________________________________________________________
consensus TGTGTGTGTGTGTGTGTGTGTGTATGTATTCAATGTATAAAGAACTTTGTAGTTGTGGGA
 
. : . : . : . : . : . :
JMFS155F04+ GACACCAGTTTCCATATGAAGGTTGATCCACAACAATGTTCAAATGTATCGAGTTCATCA
                      ____________________________________________________________
consensus GACACCAGTTTCCATATGAAGGTTGATCCACAACAATGTTCAAATGTATCGAGTTCATCA
 
. : . : . : . : . : . :
JMFS155F04+ ATTCAATACATTTACATTTTTCCCTTAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus ATTCAATACATTTACATTTTTCCCTTAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC