Contig 013178:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS138E12Sequence607013178 (2)ref|XP_010663036.1|7e-56PREDICTED: uncharacterized protein LOC100256409 isoform X2 [Vitis vinifera]
JMSF022A13Sequence695013178 (2)ref|XP_009801812.1|3e-69PREDICTED: telomere length regulation protein TEL2 homolog [Nicotiana sylvestri753024558ref|XP_009801812.1|1e-92PREDICTED: telomere length regulation protein TEL2 homolog [Nicotiana sylvestri

Alignment

This contig is upended


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JMSF022A13+                                                          AATAAGCAGTTTC
                      ____________________________________________________________
consensus                                                            AATAAGCAGTTTC
 
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JMSF022A13+           ATCCAAATTCTTGTCCCATTCTTCTGCTCCGGCAAGTATTTGAGTGGTAATATGCTTAAA
                      ____________________________________________________________
consensus             ATCCAAATTCTTGTCCCATTCTTCTGCTCCGGCAAGTATTTGAGTGGTAATATGCTTAAA
 
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JMSF022A13+           AAATAAGGGTGATGAGAGTGAAGTAGGCGCACCTGCTCGTGCTTTGTCAGGAATAGATGT
                      ____________________________________________________________
consensus             AAATAAGGGTGATGAGAGTGAAGTAGGCGCACCTGCTCGTGCTTTGTCAGGAATAGATGT
 
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JMSF022A13+           AATAAGTTGCGCCACCCTTTCAGCATTTGAGCACACTGCATTGAGATTATGAGTGCCAAG
JMFS138E12+                           CTTTCAGCATTTGAGCACACTGCATTGAGATTATGAGTGCCAAG
                      ____________________________________________________________
consensus             AATAAGTTGCGCCACCCTTTCAGCATTTGAGCACACTGCATTGAGATTATGAGTGCCAAG
 
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JMSF022A13+           ACCTCTTCCTTGTAAGCAAGGAACTAATGCCTGTATGACCTCAGTGAATTGACCATTTGT
JMFS138E12+           ACCTCTTCCTTGTAAGCAAGGAACTAATGCCTGTATGACCTCAGTGAATTGACCATTTGT
                      ____________________________________________________________
consensus             ACCTCTTCCTTGTAAGCAAGGAACTAATGCCTGTATGACCTCAGTGAATTGACCATTTGT
 
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JMSF022A13+           AAAAAACACATCATATACATGTACTCTTGCAGAAGTGGGGAAACATGCTAGCCAATCCAA
JMFS138E12+           AAAAAACACATCATATACATGTACTCTTGCAGAAGTGGGGAAACATGCTAGCCAATCCAA
                      ____________________________________________________________
consensus             AAAAAACACATCATATACATGTACTCTTGCAGAAGTGGGGAAACATGCTAGCCAATCCAA
 
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JMSF022A13+           AGCCACATCATGTAACAAAACTCGTGCCAGCATTGGAAATGCAGCACCTTTATAGAAAAT
JMFS138E12+           AGCCACATCATGTAACAAAACTCGTGCCAGCATTGGAAATGCAGCACCTTTATAGAAAAT
                      ____________________________________________________________
consensus             AGCCACATCATGTAACAAAACTCGTGCCAGCATTGGAAATGCAGCACCTTTATAGAAAAT
 
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JMSF022A13+           CTGTTGCCATTGACTTCTCTTATCAGAATCTGGCACCAGCGCGCTTTGAACCTGTTCTCT
JMFS138E12+           CTGTTGCCATTGACTTCTCTTATCAGAATCTGGCACCAGCGCGCTTTGAACCTGTTCTCT
                      ____________________________________________________________
consensus             CTGTTGCCATTGACTTCTCTTATCAGAATCTGGCACCAGCGCGCTTTGAACCTGTTCTCT
 
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JMSF022A13+           GAACTGCATATCAATACTACCTAAGAAGGAGCAAGAATCGACGGGGAATAGCGAAACAGC
JMFS138E12+           GAACTGCATATCAATACTACCTAAGAAGGAGCAAGAATCGACGGGGAATAGCGAAACAGC
                      ____________________________________________________________
consensus             GAACTGCATATCAATACTACCTAAGAAGGAGCAAGAATCGACGGGGAATAGCGAAACAGC
 
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JMSF022A13+           GAGAGAGTGAAGAGCGACGATGACTTGGTCGACGTGGCCTGCGTCCTTGATGGAGCAGAC
JMFS138E12+           GAGAGAGTGAAGAGCGACGATGACTTGGTCGACGTGGCCTGCGTCCTTGATGGAGCAGAC
                      ____________________________________________________________
consensus             GAGAGAGTGAAGAGCGACGATGACTTGGTCGACGTGGCCTGCGTCCTTGATGGAGCAGAC
 
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JMSF022A13+           GACCCGGCCCACTTTCTCTGTAATTGCCTTCTCCACTTGTCTCCAGCAACTCTCTGGTCC
JMFS138E12+           GACCCGGCCCACTTTCTCTGTAATTGCCTTCTCCACTTGTCTCCAGCAACTCTCTGGTCC
                      ____________________________________________________________
consensus             GACCCGGCCCACTTTCTCTGTAATTGCCTTCTCCACTTGTCTCCAGCAACTCTCTGGTCC
 
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JMSF022A13+           TGCATGGAAATCTTCCATGGCTGCCCAGGTAAGGTATAGTGATGTTTACAGAGTACAAGT
JMFS138E12+           TGCATGGAAATCTTCCATGGCTGCCCAGGTAAGGTATAGTGATGTTTACAGAGTACTAGT
                      ____________________________________________________________
consensus             TGCATGGAAATCTTCCATGGCTGCCCAGGTAAGGTATAGTGATGTTTACAGAGTACTAGT
 
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JMSF022A13+           ACCCCTTCTGCTAGGTAG                                          
JMFS138E12+           ACCCCTTCTGCTAGGTAGATTGCCTAGGAGTGCAATAAAGAATTATCAATTACATAATAC
                      ____________________________________________________________
consensus             ACCCCTTCTGCTAGGTAGATTGCCTAGGAGTGCAATAAAGAATTATCAATTACATAATAC