Contig 013177:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030H12Sequence449013177 (4)ref|XP_004250900.1|1e-07PREDICTED: F-box protein At2g32560 isoform X2 [Solanum lycopersicum]722001229 (3)ref|XP_009590639.1|2e-80PREDICTED: F-box protein At2g32560 [Nicotiana tomentosiformis]
JMFF041L22Sequence650013177 (4)ref|XP_010313246.1|6e-30PREDICTED: F-box protein At2g32560 isoform X1 [Solanum lycopersicum]605001229 (3)ref|XP_009590639.1|2e-49PREDICTED: F-box protein At2g32560 [Nicotiana tomentosiformis]
JMFF048N15Sequence355013177 (4)283001229 (3)
JMFS138D06Sequence598013177 (4)ref|XP_010313246.1|4e-08PREDICTED: F-box protein At2g32560 isoform X1 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF041L22+                   AGTGCCTCTCCCAAAGACTATCACTCAAGCACCTCTCCCTCAAGGAGCTGCA
                      ____________________________________________________________
consensus                     AGTGCCTCTCCCAAAGACTATCACTCAAGCACCTCTCCCTCAAGGAGCTGCA
 
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JMFF041L22+           AACACTAGCCATGTTACACAGCCCCTTGGGCGGAAGCCTCTCGAGAATGCATTCCAGCAC
                      ____________________________________________________________
consensus             AACACTAGCCATGTTACACAGCCCCTTGGGCGGAAGCCTCTCGAGAATGCATTCCAGCAC
 
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JMFF041L22+           CAAATCAGGCAAATCAAGAACTGACATTTCAGATTCTTCCATCTCTGCCCCCTCTTCAGA
                      ____________________________________________________________
consensus             CAAATCAGGCAAATCAAGAACTGACATTTCAGATTCTTCCATCTCTGCCCCCTCTTCAGA
 
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JMFF041L22+           AGAAGAACATGTCGTCTTCCTCCTTTGGAACATCCTCAAAGCAGAAAGAGCCTCCAAGAG
JMFF030H12+                                        ACATCCTCAAAGCAGAAAGAGCCTCCAAGAG
JMFS138D06+             AAGAACATGTCGTCTTCCTCCTTTGGAACATCCTCAAAGCAGAAAGAGCCTCCAAGAG
                      ____________________________________________________________
consensus             AGAAGAACATGTCGTCTTCCTCCTTTGGAACATCCTCAAAGCAGAAAGAGCCTCCAAGAG
 
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JMFF041L22+           GGCCTTCTTCTGACTCCTAACTGAGCTTAGAAATGAGAAATCTTTCCAGAACCAAAGTGG
JMFF030H12+           GGCCTTCTTCTGACTCCTANCTGAGCTTAGAAATGAGAAATCTTTCCAGAACCAAAGTGG
JMFS138D06+           GGCCTTCTTCTGACTCCTAACTGAGCTTAGAAATGAGAAATCTTTCCAGAACCAAAGTGG
                      ____________________________________________________________
consensus             GGCCTTCTTCTGACTCCTAACTGAGCTTAGAAATGAGAAATCTTTCCAGAACCAAAGTGG
 
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JMFF041L22+           CAGCAATATGAACTCAGCAGCCCATGGCGGGAGTGGCTGGAGGGACAGAGATTTACACAG
JMFF030H12+           CAGCAATATGAACTCAGCAGCCCATGGCGGGAGTGGCTGGAGGGACAGAGATTTACACAG
JMFF048N15+              CAATATGAACTCAGCAGCCCATGGCGGGAGTGGCTGGAGGGACAGAGATTTACACAG
JMFS138D06+           CAGCAATATGAACTCAGCAGCCCATGGCGGGAGTGGCTGGAGGGACAGAGATTTACACAG
                      ____________________________________________________________
consensus             CAGCAATATGAACTCAGCAGCCCATGGCGGGAGTGGCTGGAGGGACAGAGATTTACACAG
 
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JMFF041L22+           AAGAGTTATGAAGGTGAAGGAGGTTACCAAGAAGACAAGCACTATATTTGAAAAGGATTT
JMFF030H12+           AAGAGTTATGAAGGTGAAGGAGGTTACCAAGAAGACAAGCATTATATTTGAAAAGGATTT
JMFF048N15+           AAGAGTTATGAAGGTGAAGGAGGTTACCAAGAAGACAAGCATTATATTTGAAAAGGATTT
JMFS138D06+           AAGAGTTATGAAGGTGAAGGAGGTTACCAAGAAGACAAGCATTATATTTGAAAAGGATTT
                      ____________________________________________________________
consensus             AAGAGTTATGAAGGTGAAGGAGGTTACCAAGAAGACAAGCATTATATTTGAAAAGGATTT
 
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JMFF041L22+           GATTAATGAAAACCCACCAAAACAAATCAGTGGGCCTCCTCAATGTCTCCAAGCTAAAAA
JMFF030H12+           GATTAATGAAAACCCACCAAAACAAATCAGTGGGCCTCCTCAATGTCTCCAAGCTAAAAA
JMFF048N15+           GATTAATGAAAACCCACCAAAACAAATCAGTGGGCCTCCTCAATGTCTCCAAGCTAAAAA
JMFS138D06+           GATTAATGAAAACCCACCAAAACAAATCAGTGGGCCTCCTCAATGTCTCCAAGCTAAAAA
                      ____________________________________________________________
consensus             GATTAATGAAAACCCACCAAAACAAATCAGTGGGCCTCCTCAATGTCTCCAAGCTAAAAA
 
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JMFF041L22+           TCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTATAGATAAACTTAGGATTGAAGGAAAAGC
JMFF030H12+           TCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTATAGATAAACTTAGGATTGAAGGAAAAGC
JMFF048N15+           TCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTATAGATAAACTTAGGATTGAAGGAAAAGC
JMFS138D06+           TCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTATAGATAAACTTAGGATTGAAGGAAAAGC
                      ____________________________________________________________
consensus             TCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTATAGATAAACTTAGGATTGAAGGAAAAGC
 
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JMFF041L22+           ATGGCCAAAAATGGATTTTGAGAAGGAACCCAAAAACGGGAAAAATTAGAGAAGGGAAAA
JMFF030H12+           ATGGCCAAAAATGGATTTTGAGAAGGAACCCAAAAACGGGAAAAATTAGAGAAGGGAAAA
JMFF048N15+           ATGTCCAAAAATGGATTTTGAGAAGGAACCCAAAAACGGGAAAAATTAGAGAAGGGAAAA
JMFS138D06+           ATGGCCAAAAATGGATTTTGAGAAAGAACCCAAAAACGGGAAAAATTAGAGAAGGGAAAA
                      ____________________________________________________________
consensus             ATGGCCAAAAATGGATTTTGAGAAGGAACCCAAAAACGGGAAAAATTAGAGAAGGGAAAA
 
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JMFF041L22+           ACGAAAAAGAGCTGTTGTGGGCCTCTGAAACCTGGAAAAACCCCAAAGATTCAAGCTT  
JMFF030H12+           ACGAAAAAGAGCTGTTGTGGGCCTCTGAAACCTGGAAAAACCCCAAAGATTCAAGCTT  
JMFF048N15+           ACGAAAAAGAGCTGTTGTGGGCCTCTGAAACCTGGAAAAACCCCAAAGATTCAAGCTT  
JMFS138D06+           ACGAAAAAGAGCTGTTGTGGGCCTCTGAAACCTGGAAAAACCCCAAAGATTCAAGCTTGG
                      ____________________________________________________________
consensus             ACGAAAAAGAGCTGTTGTGGGCCTCTGAAACCTGGAAAAACCCCAAAGATTCAAGCTTGG
 
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JMFS138D06+           GGATGAATCCAGACACAAAGACCCACAACCTTAATGCTCAATCTTTTCTACAATGTAAAT
                      ____________________________________________________________
consensus             GGATGAATCCAGACACAAAGACCCACAACCTTAATGCTCAATCTTTTCTACAATGTAAAT
 
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JMFS138D06+           GATTGAGTTCAACCAGAATCAGGTTAGTTGGGATATATATATCTACTCCAGCAAATATAC
                      ____________________________________________________________
consensus             GATTGAGTTCAACCAGAATCAGGTTAGTTGGGATATATATATCTACTCCAGCAAATATAC